EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000008157 (Gene tree)
Gene ID: 103386275
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 9386 bases
Position: chr11:10596044-10605429
Accession: 103386275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012632	PolyA_pol	PF01743.20	1.1e-33	1	1
ENSCSEP00000012616	PolyA_pol	PF01743.20	1.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012784	-	6116	-	ENSCSEP00000012632	408 (aa)	-	-
ENSCSET00000012769	-	6057	XM_017036525	ENSCSEP00000012616	426 (aa)	XP_016892014	UPI000494EC56

Gene Model

Click here to download ENSCSEG00000008157's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008157's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008157	trnt1	95	68.473	ENSG00000072756	TRNT1	94	68.473	Homo_sapiens
ENSCSEG00000008157	trnt1	99	79.765	ENSAPOG00000013687	trnt1	99	79.765	Acanthochromis_polyacanthus
ENSCSEG00000008157	trnt1	95	67.892	ENSAMEG00000014520	TRNT1	94	67.892	Ailuropoda_melanoleuca
ENSCSEG00000008157	trnt1	99	83.059	ENSACIG00000021706	trnt1	99	83.059	Amphilophus_citrinellus
ENSCSEG00000008157	trnt1	99	82.394	ENSAOCG00000024612	trnt1	99	82.394	Amphiprion_ocellaris
ENSCSEG00000008157	trnt1	96	75.182	ENSAPEG00000022627	trnt1	95	75.182	Amphiprion_percula
ENSCSEG00000008157	trnt1	95	86.104	ENSATEG00000008928	trnt1	99	86.104	Anabas_testudineus
ENSCSEG00000008157	trnt1	95	68.974	ENSAPLG00000004258	TRNT1	97	68.974	Anas_platyrhynchos
ENSCSEG00000008157	trnt1	96	65.770	ENSACAG00000005657	TRNT1	93	65.770	Anolis_carolinensis
ENSCSEG00000008157	trnt1	95	67.980	ENSANAG00000024802	TRNT1	94	67.980	Aotus_nancymaae
ENSCSEG00000008157	trnt1	100	82.670	ENSACLG00000022227	trnt1	100	82.670	Astatotilapia_calliptera
ENSCSEG00000008157	trnt1	99	75.467	ENSAMXG00000003960	trnt1	99	75.467	Astyanax_mexicanus
ENSCSEG00000008157	trnt1	96	67.076	ENSBTAG00000019534	TRNT1	94	67.076	Bos_taurus
ENSCSEG00000008157	trnt1	97	44.963	WBGene00010089	hpo-31	94	45.060	Caenorhabditis_elegans
ENSCSEG00000008157	trnt1	95	68.227	ENSCJAG00000015466	TRNT1	94	68.227	Callithrix_jacchus
ENSCSEG00000008157	trnt1	95	68.966	ENSCAFG00000005985	TRNT1	93	68.966	Canis_familiaris
ENSCSEG00000008157	trnt1	95	68.966	ENSCAFG00020014746	TRNT1	93	68.966	Canis_lupus_dingo
ENSCSEG00000008157	trnt1	96	68.305	ENSCHIG00000007030	TRNT1	93	68.305	Capra_hircus
ENSCSEG00000008157	trnt1	99	66.824	ENSTSYG00000013390	TRNT1	98	66.824	Carlito_syrichta
ENSCSEG00000008157	trnt1	92	52.785	ENSCAPG00000006891	TRNT1	99	52.785	Cavia_aperea
ENSCSEG00000008157	trnt1	95	67.241	ENSCPOG00000007849	TRNT1	94	67.241	Cavia_porcellus
ENSCSEG00000008157	trnt1	95	68.653	ENSCCAG00000002919	TRNT1	99	66.344	Cebus_capucinus
ENSCSEG00000008157	trnt1	95	68.719	ENSCATG00000031985	TRNT1	92	68.719	Cercocebus_atys
ENSCSEG00000008157	trnt1	99	65.882	ENSCLAG00000005186	TRNT1	92	74.490	Chinchilla_lanigera
ENSCSEG00000008157	trnt1	95	68.966	ENSCSAG00000011052	TRNT1	94	68.966	Chlorocebus_sabaeus
ENSCSEG00000008157	trnt1	78	82.468	ENSCHOG00000005712	TRNT1	78	80.114	Choloepus_hoffmanni
ENSCSEG00000008157	trnt1	97	67.766	ENSCPBG00000017636	TRNT1	93	68.137	Chrysemys_picta_bellii
ENSCSEG00000008157	trnt1	95	41.728	ENSCING00000007069	-	99	41.728	Ciona_intestinalis
ENSCSEG00000008157	trnt1	94	42.338	ENSCSAVG00000007494	-	95	42.079	Ciona_savignyi
ENSCSEG00000008157	trnt1	95	68.966	ENSCANG00000039030	TRNT1	94	68.966	Colobus_angolensis_palliatus
ENSCSEG00000008157	trnt1	99	66.353	ENSCGRG00001009998	Trnt1	98	66.353	Cricetulus_griseus_chok1gshd
ENSCSEG00000008157	trnt1	99	66.353	ENSCGRG00000013410	Trnt1	94	74.372	Cricetulus_griseus_crigri
ENSCSEG00000008157	trnt1	99	81.647	ENSCVAG00000019770	trnt1	99	81.647	Cyprinodon_variegatus
ENSCSEG00000008157	trnt1	99	76.995	ENSDARG00000075297	trnt1	99	76.995	Danio_rerio
ENSCSEG00000008157	trnt1	96	69.363	ENSDNOG00000008837	TRNT1	94	69.363	Dasypus_novemcinctus
ENSCSEG00000008157	trnt1	97	67.064	ENSDORG00000014035	Trnt1	97	67.064	Dipodomys_ordii
ENSCSEG00000008157	trnt1	98	48.694	FBgn0037369	CG2100	86	48.694	Drosophila_melanogaster
ENSCSEG00000008157	trnt1	57	73.859	ENSETEG00000018177	TRNT1	97	73.859	Echinops_telfairi
ENSCSEG00000008157	trnt1	99	61.085	ENSEBUG00000012779	-	99	61.085	Eptatretus_burgeri
ENSCSEG00000008157	trnt1	95	68.966	ENSEASG00005003577	TRNT1	94	68.966	Equus_asinus_asinus
ENSCSEG00000008157	trnt1	95	69.212	ENSECAG00000014420	TRNT1	94	69.212	Equus_caballus
ENSCSEG00000008157	trnt1	99	66.745	ENSEEUG00000009567	TRNT1	97	66.745	Erinaceus_europaeus
ENSCSEG00000008157	trnt1	99	77.752	ENSELUG00000003802	trnt1	99	77.752	Esox_lucius
ENSCSEG00000008157	trnt1	95	68.473	ENSFCAG00000026805	TRNT1	93	68.473	Felis_catus
ENSCSEG00000008157	trnt1	94	69.974	ENSFALG00000013539	TRNT1	99	69.974	Ficedula_albicollis
ENSCSEG00000008157	trnt1	95	68.966	ENSFDAG00000018412	TRNT1	94	68.966	Fukomys_damarensis
ENSCSEG00000008157	trnt1	99	80.941	ENSFHEG00000019294	trnt1	99	80.941	Fundulus_heteroclitus
ENSCSEG00000008157	trnt1	99	77.465	ENSGMOG00000007460	trnt1	100	77.465	Gadus_morhua
ENSCSEG00000008157	trnt1	96	67.179	ENSGALG00000017368	TRNT1	94	66.667	Gallus_gallus
ENSCSEG00000008157	trnt1	100	80.047	ENSGAFG00000008647	trnt1	100	80.047	Gambusia_affinis
ENSCSEG00000008157	trnt1	99	81.690	ENSGACG00000011903	trnt1	99	81.690	Gasterosteus_aculeatus
ENSCSEG00000008157	trnt1	97	68.528	ENSGAGG00000020942	TRNT1	94	67.952	Gopherus_agassizii
ENSCSEG00000008157	trnt1	95	68.719	ENSGGOG00000015286	TRNT1	94	68.719	Gorilla_gorilla
ENSCSEG00000008157	trnt1	100	82.904	ENSHBUG00000002797	trnt1	100	82.904	Haplochromis_burtoni
ENSCSEG00000008157	trnt1	96	67.402	ENSHGLG00000003649	TRNT1	94	67.402	Heterocephalus_glaber_female
ENSCSEG00000008157	trnt1	95	62.899	ENSHGLG00000000221	-	94	62.899	Heterocephalus_glaber_female
ENSCSEG00000008157	trnt1	96	66.176	ENSHGLG00100016421	TRNT1	94	66.176	Heterocephalus_glaber_male
ENSCSEG00000008157	trnt1	99	77.934	ENSHCOG00000010618	trnt1	99	77.934	Hippocampus_comes
ENSCSEG00000008157	trnt1	99	74.533	ENSIPUG00000000971	trnt1	99	74.533	Ictalurus_punctatus
ENSCSEG00000008157	trnt1	96	67.157	ENSSTOG00000000150	TRNT1	86	80.447	Ictidomys_tridecemlineatus
ENSCSEG00000008157	trnt1	99	65.728	ENSJJAG00000018561	Trnt1	98	65.728	Jaculus_jaculus
ENSCSEG00000008157	trnt1	100	79.812	ENSKMAG00000011307	trnt1	100	79.812	Kryptolebias_marmoratus
ENSCSEG00000008157	trnt1	96	76.886	ENSLBEG00000019457	trnt1	97	76.886	Labrus_bergylta
ENSCSEG00000008157	trnt1	99	68.160	ENSLACG00000013227	TRNT1	98	68.160	Latimeria_chalumnae
ENSCSEG00000008157	trnt1	99	71.562	ENSLOCG00000011105	trnt1	98	71.562	Lepisosteus_oculatus
ENSCSEG00000008157	trnt1	99	67.294	ENSLAFG00000023191	TRNT1	98	67.294	Loxodonta_africana
ENSCSEG00000008157	trnt1	95	68.966	ENSMFAG00000045113	TRNT1	92	68.966	Macaca_fascicularis
ENSCSEG00000008157	trnt1	95	68.966	ENSMMUG00000017983	TRNT1	92	68.966	Macaca_mulatta
ENSCSEG00000008157	trnt1	95	68.966	ENSMNEG00000037805	TRNT1	92	68.966	Macaca_nemestrina
ENSCSEG00000008157	trnt1	94	69.110	ENSMLEG00000033671	TRNT1	99	69.110	Mandrillus_leucophaeus
ENSCSEG00000008157	trnt1	99	83.333	ENSMAMG00000023401	trnt1	99	83.333	Mastacembelus_armatus
ENSCSEG00000008157	trnt1	100	82.670	ENSMZEG00005009141	trnt1	100	82.670	Maylandia_zebra
ENSCSEG00000008157	trnt1	78	65.204	ENSMGAG00000009971	TRNT1	99	65.204	Meleagris_gallopavo
ENSCSEG00000008157	trnt1	96	67.892	ENSMAUG00000020707	Trnt1	94	67.892	Mesocricetus_auratus
ENSCSEG00000008157	trnt1	96	69.118	ENSMICG00000016615	TRNT1	94	69.118	Microcebus_murinus
ENSCSEG00000008157	trnt1	99	66.588	ENSMOCG00000004539	Trnt1	98	66.588	Microtus_ochrogaster
ENSCSEG00000008157	trnt1	99	80.000	ENSMMOG00000010742	trnt1	99	80.000	Mola_mola
ENSCSEG00000008157	trnt1	97	66.184	ENSMODG00000004368	TRNT1	95	66.184	Monodelphis_domestica
ENSCSEG00000008157	trnt1	99	79.812	ENSMALG00000008376	trnt1	99	79.812	Monopterus_albus
ENSCSEG00000008157	trnt1	96	68.627	MGP_CAROLIEiJ_G0028698	Trnt1	90	75.000	Mus_caroli
ENSCSEG00000008157	trnt1	96	68.382	ENSMUSG00000013736	Trnt1	83	80.447	Mus_musculus
ENSCSEG00000008157	trnt1	96	69.118	MGP_PahariEiJ_G0022449	Trnt1	88	81.006	Mus_pahari
ENSCSEG00000008157	trnt1	96	68.627	MGP_SPRETEiJ_G0029726	Trnt1	83	80.447	Mus_spretus
ENSCSEG00000008157	trnt1	95	68.966	ENSMPUG00000017017	TRNT1	93	68.966	Mustela_putorius_furo
ENSCSEG00000008157	trnt1	94	69.271	ENSMLUG00000011864	TRNT1	99	69.452	Myotis_lucifugus
ENSCSEG00000008157	trnt1	96	68.137	ENSNGAG00000000537	Trnt1	94	68.137	Nannospalax_galili
ENSCSEG00000008157	trnt1	81	82.948	ENSNBRG00000023606	trnt1	99	82.948	Neolamprologus_brichardi
ENSCSEG00000008157	trnt1	95	68.966	ENSNLEG00000003226	TRNT1	94	68.966	Nomascus_leucogenys
ENSCSEG00000008157	trnt1	97	65.700	ENSMEUG00000004684	TRNT1	95	65.700	Notamacropus_eugenii
ENSCSEG00000008157	trnt1	94	66.230	ENSOPRG00000015067	TRNT1	99	66.230	Ochotona_princeps
ENSCSEG00000008157	trnt1	95	67.980	ENSODEG00000007597	TRNT1	94	67.980	Octodon_degus
ENSCSEG00000008157	trnt1	99	83.099	ENSONIG00000020273	trnt1	98	83.099	Oreochromis_niloticus
ENSCSEG00000008157	trnt1	99	61.574	ENSOANG00000007514	TRNT1	99	61.574	Ornithorhynchus_anatinus
ENSCSEG00000008157	trnt1	97	67.067	ENSOCUG00000008580	TRNT1	97	67.067	Oryctolagus_cuniculus
ENSCSEG00000008157	trnt1	96	77.995	ENSORLG00000003165	trnt1	97	77.995	Oryzias_latipes
ENSCSEG00000008157	trnt1	96	78.240	ENSORLG00020022060	trnt1	97	78.240	Oryzias_latipes_hni
ENSCSEG00000008157	trnt1	96	78.240	ENSORLG00015018915	trnt1	96	78.240	Oryzias_latipes_hsok
ENSCSEG00000008157	trnt1	100	75.352	ENSOMEG00000003331	trnt1	100	75.352	Oryzias_melastigma
ENSCSEG00000008157	trnt1	96	68.305	ENSOARG00000008631	TRNT1	93	68.305	Ovis_aries
ENSCSEG00000008157	trnt1	95	68.719	ENSPPAG00000043566	TRNT1	94	68.719	Pan_paniscus
ENSCSEG00000008157	trnt1	95	68.719	ENSPPRG00000001327	TRNT1	93	68.719	Panthera_pardus
ENSCSEG00000008157	trnt1	95	68.719	ENSPTIG00000011448	TRNT1	93	68.719	Panthera_tigris_altaica
ENSCSEG00000008157	trnt1	95	68.473	ENSPTRG00000014564	TRNT1	94	68.473	Pan_troglodytes
ENSCSEG00000008157	trnt1	95	68.719	ENSPANG00000025944	TRNT1	92	68.719	Papio_anubis
ENSCSEG00000008157	trnt1	99	74.533	ENSPKIG00000020015	trnt1	99	74.533	Paramormyrops_kingsleyae
ENSCSEG00000008157	trnt1	96	68.782	ENSPSIG00000017356	TRNT1	99	69.167	Pelodiscus_sinensis
ENSCSEG00000008157	trnt1	99	79.577	ENSPMGG00000008888	trnt1	98	79.577	Periophthalmus_magnuspinnatus
ENSCSEG00000008157	trnt1	99	66.353	ENSPEMG00000019845	Trnt1	98	66.353	Peromyscus_maniculatus_bairdii
ENSCSEG00000008157	trnt1	99	65.808	ENSPCIG00000030436	TRNT1	98	65.808	Phascolarctos_cinereus
ENSCSEG00000008157	trnt1	98	80.383	ENSPFOG00000006194	trnt1	98	80.383	Poecilia_formosa
ENSCSEG00000008157	trnt1	98	80.622	ENSPLAG00000015623	trnt1	100	81.436	Poecilia_latipinna
ENSCSEG00000008157	trnt1	100	79.812	ENSPMEG00000012216	trnt1	100	81.436	Poecilia_mexicana
ENSCSEG00000008157	trnt1	100	79.343	ENSPREG00000021470	trnt1	100	79.343	Poecilia_reticulata
ENSCSEG00000008157	trnt1	96	68.137	ENSPPYG00000013702	TRNT1	94	68.137	Pongo_abelii
ENSCSEG00000008157	trnt1	94	70.419	ENSPCAG00000001951	TRNT1	99	70.419	Procavia_capensis
ENSCSEG00000008157	trnt1	95	69.212	ENSPCOG00000022228	TRNT1	94	69.212	Propithecus_coquereli
ENSCSEG00000008157	trnt1	94	67.539	ENSPVAG00000008784	TRNT1	99	67.539	Pteropus_vampyrus
ENSCSEG00000008157	trnt1	100	82.670	ENSPNYG00000003120	trnt1	100	82.670	Pundamilia_nyererei
ENSCSEG00000008157	trnt1	99	76.168	ENSPNAG00000000565	trnt1	99	76.168	Pygocentrus_nattereri
ENSCSEG00000008157	trnt1	99	67.059	ENSRNOG00000006432	Trnt1	98	67.059	Rattus_norvegicus
ENSCSEG00000008157	trnt1	95	68.227	ENSRBIG00000042632	TRNT1	93	68.227	Rhinopithecus_bieti
ENSCSEG00000008157	trnt1	95	68.719	ENSRROG00000036866	TRNT1	94	68.719	Rhinopithecus_roxellana
ENSCSEG00000008157	trnt1	95	68.227	ENSSBOG00000021208	TRNT1	94	68.227	Saimiri_boliviensis_boliviensis
ENSCSEG00000008157	trnt1	96	66.110	ENSSHAG00000018861	TRNT1	97	66.110	Sarcophilus_harrisii
ENSCSEG00000008157	trnt1	99	73.427	ENSSFOG00015020844	trnt1	99	73.427	Scleropages_formosus
ENSCSEG00000008157	trnt1	99	84.742	ENSSMAG00000015432	trnt1	98	84.742	Scophthalmus_maximus
ENSCSEG00000008157	trnt1	99	86.150	ENSSDUG00000012320	trnt1	100	86.150	Seriola_dumerili
ENSCSEG00000008157	trnt1	99	85.681	ENSSLDG00000009325	trnt1	100	85.681	Seriola_lalandi_dorsalis
ENSCSEG00000008157	trnt1	59	83.682	ENSSLDG00000016463	-	91	83.682	Seriola_lalandi_dorsalis
ENSCSEG00000008157	trnt1	94	70.157	ENSSPUG00000014153	TRNT1	99	70.157	Sphenodon_punctatus
ENSCSEG00000008157	trnt1	99	81.925	ENSSPAG00000021005	trnt1	99	81.925	Stegastes_partitus
ENSCSEG00000008157	trnt1	95	68.966	ENSSSCG00000011529	TRNT1	94	68.966	Sus_scrofa
ENSCSEG00000008157	trnt1	96	69.744	ENSTGUG00000010192	TRNT1	99	69.554	Taeniopygia_guttata
ENSCSEG00000008157	trnt1	99	79.108	ENSTRUG00000001088	trnt1	99	79.108	Takifugu_rubripes
ENSCSEG00000008157	trnt1	99	77.700	ENSTNIG00000007363	trnt1	98	77.700	Tetraodon_nigroviridis
ENSCSEG00000008157	trnt1	61	59.231	ENSTBEG00000006367	TRNT1	86	59.231	Tupaia_belangeri
ENSCSEG00000008157	trnt1	96	67.568	ENSTTRG00000007803	TRNT1	94	67.568	Tursiops_truncatus
ENSCSEG00000008157	trnt1	95	68.227	ENSUAMG00000022574	TRNT1	93	68.227	Ursus_americanus
ENSCSEG00000008157	trnt1	95	68.227	ENSUMAG00000024092	TRNT1	93	68.227	Ursus_maritimus
ENSCSEG00000008157	trnt1	95	68.966	ENSVVUG00000012810	TRNT1	93	68.966	Vulpes_vulpes
ENSCSEG00000008157	trnt1	96	64.103	ENSXETG00000025091	trnt1	99	62.935	Xenopus_tropicalis
ENSCSEG00000008157	trnt1	100	79.577	ENSXCOG00000010150	trnt1	100	79.577	Xiphophorus_couchianus
ENSCSEG00000008157	trnt1	100	79.812	ENSXMAG00000002227	trnt1	100	79.812	Xiphophorus_maculatus