EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000008324 (Gene tree)
Gene ID: 103398419
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6244 bases
Position: chrKI934267.1:462981-469224
Accession: 103398419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012880	tRNA_anti-codon	PF01336.25	2.2e-13	1	1
ENSCSEP00000012873	tRNA_anti-codon	PF01336.25	2.5e-13	1	1
ENSCSEP00000012873	tRNA-synt_2	PF00152.20	3.1e-80	1	1
ENSCSEP00000012880	tRNA-synt_2	PF00152.20	3.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013029	-	2197	-	ENSCSEP00000012873	611 (aa)	XP_024909308	UPI000D6308BD
ENSCSET00000013036	-	2025	XM_008337027	ENSCSEP00000012880	579 (aa)	XP_008335249	UPI00049697D8

Gene Model

Click here to download ENSCSEG00000008324's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008324	kars	99	79.452	ENSG00000065427	KARS	100	88.235	Homo_sapiens
ENSCSEG00000008324	kars	99	88.542	ENSAPOG00000010997	kars	99	88.542	Acanthochromis_polyacanthus
ENSCSEG00000008324	kars	99	79.245	ENSAMEG00000005347	KARS	97	77.087	Ailuropoda_melanoleuca
ENSCSEG00000008324	kars	99	86.806	ENSACIG00000000304	kars	99	86.806	Amphilophus_citrinellus
ENSCSEG00000008324	kars	99	90.559	ENSAOCG00000012971	kars	97	91.219	Amphiprion_ocellaris
ENSCSEG00000008324	kars	99	91.319	ENSAPEG00000011144	kars	99	91.319	Amphiprion_percula
ENSCSEG00000008324	kars	99	89.410	ENSATEG00000004954	kars	99	89.410	Anabas_testudineus
ENSCSEG00000008324	kars	94	80.000	ENSAPLG00000012705	KARS	99	80.000	Anas_platyrhynchos
ENSCSEG00000008324	kars	97	78.010	ENSACAG00000007577	KARS	92	76.701	Anolis_carolinensis
ENSCSEG00000008324	kars	97	66.551	ENSANAG00000031739	-	96	64.120	Aotus_nancymaae
ENSCSEG00000008324	kars	98	81.010	ENSANAG00000030403	-	96	81.010	Aotus_nancymaae
ENSCSEG00000008324	kars	99	93.056	ENSACLG00000001613	kars	98	93.056	Astatotilapia_calliptera
ENSCSEG00000008324	kars	99	90.368	ENSAMXG00000030719	kars	99	90.368	Astyanax_mexicanus
ENSCSEG00000008324	kars	99	80.207	ENSBTAG00000015677	KARS	75	80.207	Bos_taurus
ENSCSEG00000008324	kars	98	58.947	WBGene00002238	kars-1	99	61.840	Caenorhabditis_elegans
ENSCSEG00000008324	kars	99	80.895	ENSCJAG00000014213	KARS	97	81.067	Callithrix_jacchus
ENSCSEG00000008324	kars	99	80.034	ENSCAFG00000020069	KARS	97	77.833	Canis_familiaris
ENSCSEG00000008324	kars	99	80.796	ENSCAFG00020001721	KARS	97	81.142	Canis_lupus_dingo
ENSCSEG00000008324	kars	97	78.938	ENSCHIG00000016073	-	94	78.938	Capra_hircus
ENSCSEG00000008324	kars	99	80.207	ENSCHIG00000014108	-	98	80.207	Capra_hircus
ENSCSEG00000008324	kars	97	82.332	ENSTSYG00000001643	KARS	96	82.523	Carlito_syrichta
ENSCSEG00000008324	kars	98	73.913	ENSCAPG00000016234	KARS	94	74.821	Cavia_aperea
ENSCSEG00000008324	kars	99	80.690	ENSCPOG00000012036	KARS	97	81.109	Cavia_porcellus
ENSCSEG00000008324	kars	93	64.781	ENSCCAG00000030337	-	100	65.146	Cebus_capucinus
ENSCSEG00000008324	kars	98	81.185	ENSCCAG00000034307	-	96	81.533	Cebus_capucinus
ENSCSEG00000008324	kars	99	79.281	ENSCATG00000038129	KARS	96	80.000	Cercocebus_atys
ENSCSEG00000008324	kars	98	79.930	ENSCLAG00000007905	KARS	96	80.279	Chinchilla_lanigera
ENSCSEG00000008324	kars	99	78.657	ENSCSAG00000003664	KARS	93	78.657	Chlorocebus_sabaeus
ENSCSEG00000008324	kars	78	85.463	ENSCHOG00000013447	KARS	73	85.463	Choloepus_hoffmanni
ENSCSEG00000008324	kars	96	83.005	ENSCPBG00000026969	KARS	94	83.005	Chrysemys_picta_bellii
ENSCSEG00000008324	kars	88	73.047	ENSCPBG00000002553	-	93	73.047	Chrysemys_picta_bellii
ENSCSEG00000008324	kars	98	67.845	ENSCING00000009513	-	98	67.845	Ciona_intestinalis
ENSCSEG00000008324	kars	99	68.063	ENSCSAVG00000007684	-	99	67.657	Ciona_savignyi
ENSCSEG00000008324	kars	55	71.739	ENSCSAVG00000001136	-	98	73.930	Ciona_savignyi
ENSCSEG00000008324	kars	99	75.342	ENSCANG00000032813	KARS	98	75.342	Colobus_angolensis_palliatus
ENSCSEG00000008324	kars	98	81.250	ENSCGRG00001004055	KARS	96	81.424	Cricetulus_griseus_chok1gshd
ENSCSEG00000008324	kars	98	81.250	ENSCGRG00000014242	KARS	96	81.424	Cricetulus_griseus_crigri
ENSCSEG00000008324	kars	98	91.404	ENSCVAG00000019686	kars	99	91.404	Cyprinodon_variegatus
ENSCSEG00000008324	kars	99	88.715	ENSDARG00000103799	kars	99	90.643	Danio_rerio
ENSCSEG00000008324	kars	99	79.518	ENSDNOG00000002241	KARS	97	77.705	Dasypus_novemcinctus
ENSCSEG00000008324	kars	98	80.803	ENSDORG00000004780	-	96	80.803	Dipodomys_ordii
ENSCSEG00000008324	kars	94	63.437	ENSDORG00000024214	-	94	63.553	Dipodomys_ordii
ENSCSEG00000008324	kars	98	70.578	FBgn0027084	LysRS	99	70.191	Drosophila_melanogaster
ENSCSEG00000008324	kars	99	79.346	ENSETEG00000008353	KARS	96	76.519	Echinops_telfairi
ENSCSEG00000008324	kars	98	72.251	ENSEBUG00000001284	-	97	72.281	Eptatretus_burgeri
ENSCSEG00000008324	kars	98	80.936	ENSEASG00005013497	KARS	97	80.936	Equus_asinus_asinus
ENSCSEG00000008324	kars	98	80.936	ENSECAG00000013424	KARS	97	80.936	Equus_caballus
ENSCSEG00000008324	kars	98	74.261	ENSEEUG00000007042	KARS	97	71.546	Erinaceus_europaeus
ENSCSEG00000008324	kars	97	82.206	ENSELUG00000014575	kars	96	82.206	Esox_lucius
ENSCSEG00000008324	kars	99	79.620	ENSFCAG00000008573	KARS	97	80.829	Felis_catus
ENSCSEG00000008324	kars	98	81.086	ENSFALG00000002543	KARS	97	81.086	Ficedula_albicollis
ENSCSEG00000008324	kars	98	80.208	ENSFDAG00000007155	KARS	96	80.556	Fukomys_damarensis
ENSCSEG00000008324	kars	99	88.850	ENSFHEG00000006172	kars	99	88.850	Fundulus_heteroclitus
ENSCSEG00000008324	kars	97	88.339	ENSGMOG00000002633	kars	99	86.088	Gadus_morhua
ENSCSEG00000008324	kars	99	79.931	ENSGALG00000000907	KARS	99	80.702	Gallus_gallus
ENSCSEG00000008324	kars	99	90.767	ENSGAFG00000017252	kars	99	90.767	Gambusia_affinis
ENSCSEG00000008324	kars	99	88.946	ENSGACG00000015749	kars	99	87.541	Gasterosteus_aculeatus
ENSCSEG00000008324	kars	88	72.978	ENSGAGG00000011960	-	95	73.069	Gopherus_agassizii
ENSCSEG00000008324	kars	96	83.184	ENSGAGG00000023836	KARS	94	83.184	Gopherus_agassizii
ENSCSEG00000008324	kars	99	79.281	ENSGGOG00000005515	KARS	98	79.623	Gorilla_gorilla
ENSCSEG00000008324	kars	99	93.056	ENSHBUG00000013619	kars	98	93.056	Haplochromis_burtoni
ENSCSEG00000008324	kars	99	80.069	ENSHGLG00000011898	KARS	98	80.319	Heterocephalus_glaber_female
ENSCSEG00000008324	kars	98	65.464	ENSHGLG00000001298	-	96	65.464	Heterocephalus_glaber_female
ENSCSEG00000008324	kars	99	71.057	ENSHGLG00000015235	-	97	71.577	Heterocephalus_glaber_female
ENSCSEG00000008324	kars	99	80.069	ENSHGLG00100012264	KARS	97	80.069	Heterocephalus_glaber_male
ENSCSEG00000008324	kars	99	70.884	ENSHGLG00100012523	-	97	71.404	Heterocephalus_glaber_male
ENSCSEG00000008324	kars	98	65.292	ENSHGLG00100006466	-	96	65.292	Heterocephalus_glaber_male
ENSCSEG00000008324	kars	99	90.625	ENSHCOG00000002900	kars	96	90.625	Hippocampus_comes
ENSCSEG00000008324	kars	99	90.104	ENSIPUG00000009862	kars	99	90.104	Ictalurus_punctatus
ENSCSEG00000008324	kars	98	80.803	ENSSTOG00000004205	KARS	96	80.977	Ictidomys_tridecemlineatus
ENSCSEG00000008324	kars	98	80.035	ENSJJAG00000020406	Kars	97	80.803	Jaculus_jaculus
ENSCSEG00000008324	kars	99	91.146	ENSKMAG00000006434	kars	99	91.146	Kryptolebias_marmoratus
ENSCSEG00000008324	kars	99	92.188	ENSLBEG00000026537	kars	99	90.625	Labrus_bergylta
ENSCSEG00000008324	kars	96	82.883	ENSLACG00000006667	KARS	95	79.492	Latimeria_chalumnae
ENSCSEG00000008324	kars	87	76.087	ENSLACG00000016399	-	100	75.486	Latimeria_chalumnae
ENSCSEG00000008324	kars	99	87.522	ENSLOCG00000004002	kars	99	87.522	Lepisosteus_oculatus
ENSCSEG00000008324	kars	90	71.484	ENSLOCG00000013608	-	94	71.484	Lepisosteus_oculatus
ENSCSEG00000008324	kars	99	78.313	ENSLAFG00000015340	KARS	93	78.313	Loxodonta_africana
ENSCSEG00000008324	kars	99	79.110	ENSMFAG00000040024	KARS	98	79.110	Macaca_fascicularis
ENSCSEG00000008324	kars	88	77.071	ENSMNEG00000035832	-	99	77.282	Macaca_nemestrina
ENSCSEG00000008324	kars	99	79.110	ENSMNEG00000042879	-	98	79.110	Macaca_nemestrina
ENSCSEG00000008324	kars	99	79.281	ENSMLEG00000034947	KARS	98	79.281	Mandrillus_leucophaeus
ENSCSEG00000008324	kars	99	90.461	ENSMAMG00000021559	kars	99	90.461	Mastacembelus_armatus
ENSCSEG00000008324	kars	99	93.056	ENSMZEG00005014382	kars	98	93.056	Maylandia_zebra
ENSCSEG00000008324	kars	98	77.835	ENSMGAG00000009000	KARS	97	81.569	Meleagris_gallopavo
ENSCSEG00000008324	kars	99	80.272	ENSMICG00000011997	KARS	99	80.272	Microcebus_murinus
ENSCSEG00000008324	kars	98	78.984	ENSMOCG00000019029	-	96	78.984	Microtus_ochrogaster
ENSCSEG00000008324	kars	98	81.611	ENSMOCG00000011829	Kars	96	81.611	Microtus_ochrogaster
ENSCSEG00000008324	kars	97	91.444	ENSMMOG00000016934	kars	99	91.444	Mola_mola
ENSCSEG00000008324	kars	97	78.660	ENSMODG00000002215	-	99	78.836	Monodelphis_domestica
ENSCSEG00000008324	kars	96	75.936	ENSMODG00000002238	-	96	71.849	Monodelphis_domestica
ENSCSEG00000008324	kars	99	89.583	ENSMALG00000020858	kars	99	89.583	Monopterus_albus
ENSCSEG00000008324	kars	85	79.737	MGP_CAROLIEiJ_G0031588	Kars	97	79.737	Mus_caroli
ENSCSEG00000008324	kars	99	81.282	ENSMUSG00000031948	Kars	97	81.282	Mus_musculus
ENSCSEG00000008324	kars	99	80.763	MGP_PahariEiJ_G0023186	Kars	97	80.763	Mus_pahari
ENSCSEG00000008324	kars	99	81.109	MGP_SPRETEiJ_G0032706	Kars	97	81.109	Mus_spretus
ENSCSEG00000008324	kars	99	79.002	ENSMPUG00000009871	KARS	97	76.809	Mustela_putorius_furo
ENSCSEG00000008324	kars	97	81.195	ENSMLUG00000015119	-	95	81.195	Myotis_lucifugus
ENSCSEG00000008324	kars	80	54.133	ENSMLUG00000026871	-	76	54.133	Myotis_lucifugus
ENSCSEG00000008324	kars	97	81.129	ENSNGAG00000018820	-	95	81.129	Nannospalax_galili
ENSCSEG00000008324	kars	95	79.747	ENSNGAG00000022944	-	95	79.747	Nannospalax_galili
ENSCSEG00000008324	kars	99	92.882	ENSNBRG00000011098	kars	98	92.882	Neolamprologus_brichardi
ENSCSEG00000008324	kars	99	79.452	ENSNLEG00000013072	KARS	98	79.795	Nomascus_leucogenys
ENSCSEG00000008324	kars	97	77.305	ENSMEUG00000008684	KARS	99	73.650	Notamacropus_eugenii
ENSCSEG00000008324	kars	99	78.669	ENSOPRG00000012544	KARS	98	77.258	Ochotona_princeps
ENSCSEG00000008324	kars	97	57.549	ENSODEG00000009464	-	98	57.549	Octodon_degus
ENSCSEG00000008324	kars	98	81.993	ENSODEG00000013099	-	97	82.258	Octodon_degus
ENSCSEG00000008324	kars	99	92.188	ENSONIG00000005937	kars	99	92.188	Oreochromis_niloticus
ENSCSEG00000008324	kars	96	82.554	ENSOANG00000008179	KARS	94	82.554	Ornithorhynchus_anatinus
ENSCSEG00000008324	kars	99	74.573	ENSOCUG00000015553	KARS	98	74.573	Oryctolagus_cuniculus
ENSCSEG00000008324	kars	98	89.771	ENSORLG00000007627	kars	99	87.521	Oryzias_latipes
ENSCSEG00000008324	kars	98	89.594	ENSORLG00020010056	kars	99	87.521	Oryzias_latipes_hni
ENSCSEG00000008324	kars	98	89.771	ENSORLG00015008179	kars	99	87.521	Oryzias_latipes_hsok
ENSCSEG00000008324	kars	99	90.468	ENSOMEG00000001710	kars	99	90.468	Oryzias_melastigma
ENSCSEG00000008324	kars	99	74.061	ENSOGAG00000005903	KARS	97	71.498	Otolemur_garnettii
ENSCSEG00000008324	kars	93	80.074	ENSOARG00000006928	KARS	95	80.074	Ovis_aries
ENSCSEG00000008324	kars	99	79.110	ENSPPAG00000036192	KARS	98	79.452	Pan_paniscus
ENSCSEG00000008324	kars	99	80.069	ENSPPRG00000003027	KARS	98	80.308	Panthera_pardus
ENSCSEG00000008324	kars	99	80.069	ENSPTIG00000008011	KARS	98	80.308	Panthera_tigris_altaica
ENSCSEG00000008324	kars	99	79.281	ENSPTRG00000008364	KARS	98	79.623	Pan_troglodytes
ENSCSEG00000008324	kars	99	79.281	ENSPANG00000024106	KARS	93	78.830	Papio_anubis
ENSCSEG00000008324	kars	99	88.388	ENSPKIG00000009896	kars	99	88.388	Paramormyrops_kingsleyae
ENSCSEG00000008324	kars	96	81.786	ENSPSIG00000009294	KARS	96	81.964	Pelodiscus_sinensis
ENSCSEG00000008324	kars	90	73.372	ENSPSIG00000003041	-	96	73.372	Pelodiscus_sinensis
ENSCSEG00000008324	kars	97	93.036	ENSPMGG00000006117	kars	99	93.036	Periophthalmus_magnuspinnatus
ENSCSEG00000008324	kars	99	80.484	ENSPEMG00000012277	Kars	97	80.484	Peromyscus_maniculatus_bairdii
ENSCSEG00000008324	kars	97	75.132	ENSPMAG00000008360	-	91	75.309	Petromyzon_marinus
ENSCSEG00000008324	kars	99	79.760	ENSPCIG00000010761	-	98	79.760	Phascolarctos_cinereus
ENSCSEG00000008324	kars	97	77.143	ENSPCIG00000025469	-	97	72.697	Phascolarctos_cinereus
ENSCSEG00000008324	kars	99	90.099	ENSPFOG00000013253	kars	99	90.099	Poecilia_formosa
ENSCSEG00000008324	kars	99	91.115	ENSPLAG00000004189	kars	99	91.115	Poecilia_latipinna
ENSCSEG00000008324	kars	99	91.289	ENSPMEG00000015698	kars	99	91.289	Poecilia_mexicana
ENSCSEG00000008324	kars	99	91.289	ENSPREG00000023179	kars	99	91.289	Poecilia_reticulata
ENSCSEG00000008324	kars	99	78.313	ENSPPYG00000007567	KARS	93	78.657	Pongo_abelii
ENSCSEG00000008324	kars	88	74.902	ENSPCAG00000010790	KARS	98	74.902	Procavia_capensis
ENSCSEG00000008324	kars	99	74.567	ENSPCOG00000003166	KARS	85	85.621	Propithecus_coquereli
ENSCSEG00000008324	kars	97	80.885	ENSPVAG00000006746	KARS	97	77.138	Pteropus_vampyrus
ENSCSEG00000008324	kars	99	93.056	ENSPNYG00000013095	kars	98	93.056	Pundamilia_nyererei
ENSCSEG00000008324	kars	99	89.510	ENSPNAG00000013828	kars	99	89.510	Pygocentrus_nattereri
ENSCSEG00000008324	kars	100	78.151	ENSRNOG00000019456	Kars	99	75.602	Rattus_norvegicus
ENSCSEG00000008324	kars	99	78.938	ENSRBIG00000030118	KARS	96	79.646	Rhinopithecus_bieti
ENSCSEG00000008324	kars	99	78.141	ENSRROG00000041418	KARS	96	79.646	Rhinopithecus_roxellana
ENSCSEG00000008324	kars	77	34.034	YNL073W	-	82	34.034	Saccharomyces_cerevisiae
ENSCSEG00000008324	kars	96	56.437	YDR037W	KRS1	94	55.888	Saccharomyces_cerevisiae
ENSCSEG00000008324	kars	99	80.379	ENSSBOG00000019255	KARS	98	81.028	Saimiri_boliviensis_boliviensis
ENSCSEG00000008324	kars	96	75.221	ENSSHAG00000001359	-	97	75.398	Sarcophilus_harrisii
ENSCSEG00000008324	kars	98	65.451	ENSSHAG00000002050	-	96	62.237	Sarcophilus_harrisii
ENSCSEG00000008324	kars	93	70.037	ENSSHAG00000009005	-	98	70.037	Sarcophilus_harrisii
ENSCSEG00000008324	kars	96	88.669	ENSSFOG00015014837	kars	97	88.582	Scleropages_formosus
ENSCSEG00000008324	kars	99	93.750	ENSSMAG00000021441	kars	99	93.750	Scophthalmus_maximus
ENSCSEG00000008324	kars	99	93.403	ENSSDUG00000001202	kars	99	93.403	Seriola_dumerili
ENSCSEG00000008324	kars	97	93.060	ENSSLDG00000021220	kars	97	93.238	Seriola_lalandi_dorsalis
ENSCSEG00000008324	kars	76	83.929	ENSSARG00000011493	KARS	77	83.929	Sorex_araneus
ENSCSEG00000008324	kars	65	65.508	ENSSPUG00000000449	-	86	65.416	Sphenodon_punctatus
ENSCSEG00000008324	kars	96	82.332	ENSSPUG00000004974	KARS	96	81.424	Sphenodon_punctatus
ENSCSEG00000008324	kars	99	90.954	ENSSPAG00000020365	kars	97	92.335	Stegastes_partitus
ENSCSEG00000008324	kars	98	80.656	ENSSSCG00000002704	KARS	97	81.002	Sus_scrofa
ENSCSEG00000008324	kars	97	81.139	ENSTGUG00000008400	KARS	100	81.139	Taeniopygia_guttata
ENSCSEG00000008324	kars	97	87.211	ENSTRUG00000017551	kars	99	84.868	Takifugu_rubripes
ENSCSEG00000008324	kars	99	86.087	ENSTNIG00000009351	kars	99	86.261	Tetraodon_nigroviridis
ENSCSEG00000008324	kars	97	62.324	ENSTBEG00000004610	KARS	99	62.324	Tupaia_belangeri
ENSCSEG00000008324	kars	99	78.767	ENSTTRG00000001221	KARS	97	77.124	Tursiops_truncatus
ENSCSEG00000008324	kars	99	80.517	ENSUAMG00000017557	KARS	97	80.517	Ursus_americanus
ENSCSEG00000008324	kars	99	79.760	ENSUMAG00000014559	KARS	97	77.250	Ursus_maritimus
ENSCSEG00000008324	kars	99	77.281	ENSVPAG00000003716	KARS	97	75.205	Vicugna_pacos
ENSCSEG00000008324	kars	99	80.450	ENSVVUG00000024338	KARS	96	81.869	Vulpes_vulpes
ENSCSEG00000008324	kars	96	81.900	ENSXETG00000003569	kars	98	79.720	Xenopus_tropicalis
ENSCSEG00000008324	kars	96	91.727	ENSXCOG00000011313	kars	99	91.727	Xiphophorus_couchianus
ENSCSEG00000008324	kars	99	91.289	ENSXMAG00000003191	kars	99	91.289	Xiphophorus_maculatus