EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008332 (Gene tree)
Gene ID: 103396928
Gene Symbol: -
Alias: -
Full Name: ribonuclease P/MRP protein subunit POP5-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3777 bases
Position: chrW:2002417-2006193
Accession: 103396928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012882	RNase_P_Rpp14	PF01900.19	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013038	-	2913	XM_008335173	ENSCSEP00000012882	166 (aa)	XP_008333395	UPI000497395C

Gene Model

Click here to download ENSCSEG00000008332's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008332	-	100	90.361	ENSCSEG00000011103	pop5	100	90.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008332	-	88	54.730	ENSG00000167272	POP5	93	54.305	Homo_sapiens
ENSCSEG00000008332	-	91	76.316	ENSAPOG00000023686	POP5	92	76.471	Acanthochromis_polyacanthus
ENSCSEG00000008332	-	96	50.920	ENSAMEG00000008503	POP5	91	50.968	Ailuropoda_melanoleuca
ENSCSEG00000008332	-	92	78.571	ENSACIG00000018362	pop5	93	78.571	Amphilophus_citrinellus
ENSCSEG00000008332	-	92	78.431	ENSAOCG00000001930	pop5	92	78.431	Amphiprion_ocellaris
ENSCSEG00000008332	-	92	77.778	ENSAPEG00000006795	pop5	92	77.778	Amphiprion_percula
ENSCSEG00000008332	-	92	76.623	ENSATEG00000016792	pop5	92	76.623	Anabas_testudineus
ENSCSEG00000008332	-	56	56.383	ENSAPLG00000015761	POP5	90	55.670	Anas_platyrhynchos
ENSCSEG00000008332	-	100	46.707	ENSACAG00000003091	POP5	91	47.682	Anolis_carolinensis
ENSCSEG00000008332	-	88	55.705	ENSANAG00000023744	POP5	95	53.846	Aotus_nancymaae
ENSCSEG00000008332	-	92	77.124	ENSACLG00000021131	-	91	77.124	Astatotilapia_calliptera
ENSCSEG00000008332	-	88	59.864	ENSAMXG00000038175	pop5	85	59.864	Astyanax_mexicanus
ENSCSEG00000008332	-	98	51.829	ENSBTAG00000005385	POP5	89	54.605	Bos_taurus
ENSCSEG00000008332	-	88	55.405	ENSCJAG00000001309	POP5	95	53.548	Callithrix_jacchus
ENSCSEG00000008332	-	98	51.220	ENSCAFG00000010389	POP5	91	53.247	Canis_familiaris
ENSCSEG00000008332	-	98	51.220	ENSCAFG00020020663	POP5	91	53.247	Canis_lupus_dingo
ENSCSEG00000008332	-	98	51.829	ENSCHIG00000016402	POP5	89	54.605	Capra_hircus
ENSCSEG00000008332	-	83	56.204	ENSTSYG00000027616	POP5	91	53.247	Carlito_syrichta
ENSCSEG00000008332	-	64	52.336	ENSCAPG00000016873	POP5	88	50.505	Cavia_aperea
ENSCSEG00000008332	-	98	52.469	ENSCPOG00000012337	POP5	92	51.299	Cavia_porcellus
ENSCSEG00000008332	-	88	54.730	ENSCCAG00000023154	POP5	95	52.903	Cebus_capucinus
ENSCSEG00000008332	-	88	54.730	ENSCATG00000036825	POP5	93	53.642	Cercocebus_atys
ENSCSEG00000008332	-	100	50.000	ENSCLAG00000007808	POP5	91	53.247	Chinchilla_lanigera
ENSCSEG00000008332	-	88	54.730	ENSCSAG00000002246	POP5	93	54.305	Chlorocebus_sabaeus
ENSCSEG00000008332	-	81	45.926	ENSCHOG00000013969	POP5	88	43.624	Choloepus_hoffmanni
ENSCSEG00000008332	-	98	53.049	ENSCPBG00000011331	POP5	88	55.782	Chrysemys_picta_bellii
ENSCSEG00000008332	-	88	54.730	ENSCANG00000028001	POP5	93	54.305	Colobus_angolensis_palliatus
ENSCSEG00000008332	-	100	51.190	ENSCGRG00001017974	Pop5	91	53.247	Cricetulus_griseus_chok1gshd
ENSCSEG00000008332	-	100	51.190	ENSCGRG00000010102	Pop5	91	53.247	Cricetulus_griseus_crigri
ENSCSEG00000008332	-	99	50.000	ENSCVAG00000009152	-	87	51.020	Cyprinodon_variegatus
ENSCSEG00000008332	-	90	59.355	ENSDARG00000053452	pop5	93	58.228	Danio_rerio
ENSCSEG00000008332	-	81	56.296	ENSDNOG00000045952	-	91	51.948	Dasypus_novemcinctus
ENSCSEG00000008332	-	81	56.522	ENSDNOG00000012668	-	82	52.229	Dasypus_novemcinctus
ENSCSEG00000008332	-	81	58.519	ENSDORG00000029401	Pop5	92	53.896	Dipodomys_ordii
ENSCSEG00000008332	-	82	30.657	FBgn0036696	CG14057	91	30.657	Drosophila_melanogaster
ENSCSEG00000008332	-	98	47.853	ENSETEG00000009283	POP5	88	51.351	Echinops_telfairi
ENSCSEG00000008332	-	94	40.506	ENSEBUG00000016369	pop5	87	42.958	Eptatretus_burgeri
ENSCSEG00000008332	-	83	56.934	ENSEASG00005004714	POP5	91	53.896	Equus_asinus_asinus
ENSCSEG00000008332	-	81	57.037	ENSECAG00000010012	POP5	91	53.247	Equus_caballus
ENSCSEG00000008332	-	99	61.212	ENSELUG00000023394	pop5	93	64.901	Esox_lucius
ENSCSEG00000008332	-	98	51.829	ENSFCAG00000042614	POP5	91	53.247	Felis_catus
ENSCSEG00000008332	-	92	55.844	ENSFALG00000007537	POP5	92	55.844	Ficedula_albicollis
ENSCSEG00000008332	-	100	48.503	ENSFDAG00000009972	POP5	92	51.948	Fukomys_damarensis
ENSCSEG00000008332	-	98	75.000	ENSFHEG00000022341	pop5	93	76.623	Fundulus_heteroclitus
ENSCSEG00000008332	-	78	70.000	ENSGMOG00000001073	pop5	98	70.000	Gadus_morhua
ENSCSEG00000008332	-	89	52.703	ENSGALG00000007124	POP5	53	52.703	Gallus_gallus
ENSCSEG00000008332	-	89	73.826	ENSGAFG00000005937	-	92	72.078	Gambusia_affinis
ENSCSEG00000008332	-	98	71.779	ENSGACG00000012710	-	94	75.163	Gasterosteus_aculeatus
ENSCSEG00000008332	-	98	53.659	ENSGAGG00000016005	POP5	88	56.463	Gopherus_agassizii
ENSCSEG00000008332	-	88	54.730	ENSGGOG00000013505	POP5	93	54.305	Gorilla_gorilla
ENSCSEG00000008332	-	92	77.922	ENSHBUG00000011718	-	91	77.922	Haplochromis_burtoni
ENSCSEG00000008332	-	98	50.909	ENSHGLG00000011786	POP5	92	52.597	Heterocephalus_glaber_female
ENSCSEG00000008332	-	98	50.909	ENSHGLG00100014284	POP5	92	52.597	Heterocephalus_glaber_male
ENSCSEG00000008332	-	87	74.483	ENSHCOG00000011809	pop5	89	74.483	Hippocampus_comes
ENSCSEG00000008332	-	88	61.905	ENSIPUG00000003437	pop5	88	61.905	Ictalurus_punctatus
ENSCSEG00000008332	-	100	48.810	ENSSTOG00000012577	POP5	91	51.948	Ictidomys_tridecemlineatus
ENSCSEG00000008332	-	81	60.294	ENSJJAG00000001080	Pop5	88	56.667	Jaculus_jaculus
ENSCSEG00000008332	-	91	75.658	ENSKMAG00000011158	-	90	75.817	Kryptolebias_marmoratus
ENSCSEG00000008332	-	95	77.215	ENSLBEG00000008652	pop5	84	77.273	Labrus_bergylta
ENSCSEG00000008332	-	98	51.534	ENSLACG00000018188	POP5	91	53.741	Latimeria_chalumnae
ENSCSEG00000008332	-	88	60.544	ENSLOCG00000002924	pop5	88	60.544	Lepisosteus_oculatus
ENSCSEG00000008332	-	99	51.176	ENSLAFG00000014545	POP5	89	52.288	Loxodonta_africana
ENSCSEG00000008332	-	88	54.730	ENSMFAG00000045933	POP5	96	54.305	Macaca_fascicularis
ENSCSEG00000008332	-	88	54.730	ENSMMUG00000040120	POP5	93	54.305	Macaca_mulatta
ENSCSEG00000008332	-	88	54.730	ENSMNEG00000041716	POP5	93	54.305	Macaca_nemestrina
ENSCSEG00000008332	-	88	55.405	ENSMLEG00000029377	POP5	93	54.967	Mandrillus_leucophaeus
ENSCSEG00000008332	-	92	74.675	ENSMAMG00000002108	pop5	92	74.675	Mastacembelus_armatus
ENSCSEG00000008332	-	92	77.922	ENSMZEG00005000069	-	91	77.922	Maylandia_zebra
ENSCSEG00000008332	-	100	51.190	ENSMAUG00000019670	Pop5	91	53.896	Mesocricetus_auratus
ENSCSEG00000008332	-	98	47.093	ENSMICG00000008692	POP5	91	53.896	Microcebus_murinus
ENSCSEG00000008332	-	100	51.786	ENSMOCG00000013322	Pop5	79	58.955	Microtus_ochrogaster
ENSCSEG00000008332	-	87	73.973	ENSMMOG00000010471	pop5	90	73.649	Mola_mola
ENSCSEG00000008332	-	99	50.602	ENSMODG00000003066	POP5	62	52.941	Monodelphis_domestica
ENSCSEG00000008332	-	91	75.658	ENSMALG00000017797	-	92	75.817	Monopterus_albus
ENSCSEG00000008332	-	99	52.096	MGP_CAROLIEiJ_G0027618	Pop5	91	53.247	Mus_caroli
ENSCSEG00000008332	-	99	52.096	ENSMUSG00000060152	Pop5	91	53.247	Mus_musculus
ENSCSEG00000008332	-	100	50.595	MGP_PahariEiJ_G0024198	Pop5	91	51.948	Mus_pahari
ENSCSEG00000008332	-	99	51.497	MGP_SPRETEiJ_G0028616	Pop5	91	52.597	Mus_spretus
ENSCSEG00000008332	-	88	53.378	ENSMPUG00000003221	POP5	91	51.948	Mustela_putorius_furo
ENSCSEG00000008332	-	81	58.394	ENSMLUG00000014657	POP5	93	55.128	Myotis_lucifugus
ENSCSEG00000008332	-	81	57.778	ENSNGAG00000002594	Pop5	90	53.896	Nannospalax_galili
ENSCSEG00000008332	-	82	69.853	ENSNBRG00000001020	-	99	69.853	Neolamprologus_brichardi
ENSCSEG00000008332	-	88	54.730	ENSNLEG00000015839	POP5	95	53.548	Nomascus_leucogenys
ENSCSEG00000008332	-	97	50.617	ENSMEUG00000015288	POP5	91	52.381	Notamacropus_eugenii
ENSCSEG00000008332	-	81	56.296	ENSOPRG00000004327	POP5	89	52.632	Ochotona_princeps
ENSCSEG00000008332	-	81	56.296	ENSODEG00000006549	-	91	52.597	Octodon_degus
ENSCSEG00000008332	-	95	47.771	ENSODEG00000010351	-	85	50.000	Octodon_degus
ENSCSEG00000008332	-	92	78.571	ENSONIG00000011172	pop5	91	78.571	Oreochromis_niloticus
ENSCSEG00000008332	-	57	56.842	ENSOANG00000001792	-	90	54.369	Ornithorhynchus_anatinus
ENSCSEG00000008332	-	98	50.610	ENSOCUG00000006537	POP5	90	51.948	Oryctolagus_cuniculus
ENSCSEG00000008332	-	99	70.303	ENSORLG00000014745	pop5	88	76.027	Oryzias_latipes
ENSCSEG00000008332	-	99	70.909	ENSORLG00020001168	pop5	90	76.000	Oryzias_latipes_hni
ENSCSEG00000008332	-	99	68.263	ENSORLG00015013535	pop5	88	73.649	Oryzias_latipes_hsok
ENSCSEG00000008332	-	99	72.121	ENSOMEG00000017643	pop5	92	74.675	Oryzias_melastigma
ENSCSEG00000008332	-	93	52.258	ENSOGAG00000008528	POP5	84	54.745	Otolemur_garnettii
ENSCSEG00000008332	-	98	51.205	ENSOARG00000012764	POP5	90	53.896	Ovis_aries
ENSCSEG00000008332	-	88	54.730	ENSPPAG00000043719	POP5	93	54.305	Pan_paniscus
ENSCSEG00000008332	-	98	51.829	ENSPPRG00000006474	POP5	91	53.247	Panthera_pardus
ENSCSEG00000008332	-	98	51.829	ENSPTIG00000012194	POP5	91	53.247	Panthera_tigris_altaica
ENSCSEG00000008332	-	88	54.730	ENSPTRG00000005543	POP5	93	54.305	Pan_troglodytes
ENSCSEG00000008332	-	88	54.730	ENSPANG00000014166	POP5	93	54.305	Papio_anubis
ENSCSEG00000008332	-	87	67.114	ENSPKIG00000025154	pop5	95	64.968	Paramormyrops_kingsleyae
ENSCSEG00000008332	-	66	52.679	ENSPSIG00000013154	POP5	75	58.065	Pelodiscus_sinensis
ENSCSEG00000008332	-	99	66.061	ENSPMGG00000000812	-	89	70.068	Periophthalmus_magnuspinnatus
ENSCSEG00000008332	-	100	50.000	ENSPEMG00000017493	Pop5	91	53.247	Peromyscus_maniculatus_bairdii
ENSCSEG00000008332	-	89	71.333	ENSPFOG00000013000	pop5	94	72.549	Poecilia_formosa
ENSCSEG00000008332	-	89	73.154	ENSPLAG00000014070	pop5	89	73.154	Poecilia_latipinna
ENSCSEG00000008332	-	89	73.826	ENSPMEG00000012863	POP5	92	72.078	Poecilia_mexicana
ENSCSEG00000008332	-	89	73.826	ENSPMEG00000024039	pop5	92	72.078	Poecilia_mexicana
ENSCSEG00000008332	-	89	75.839	ENSPREG00000020151	pop5	89	75.839	Poecilia_reticulata
ENSCSEG00000008332	-	88	55.405	ENSPPYG00000005036	POP5	78	54.967	Pongo_abelii
ENSCSEG00000008332	-	63	53.846	ENSPCAG00000004788	POP5	100	53.846	Procavia_capensis
ENSCSEG00000008332	-	81	57.037	ENSPCOG00000017618	POP5	91	53.247	Propithecus_coquereli
ENSCSEG00000008332	-	81	57.778	ENSPVAG00000002233	POP5	91	53.247	Pteropus_vampyrus
ENSCSEG00000008332	-	92	77.922	ENSPNYG00000002679	pop5	91	77.922	Pundamilia_nyererei
ENSCSEG00000008332	-	87	57.931	ENSPNAG00000012662	pop5	82	57.931	Pygocentrus_nattereri
ENSCSEG00000008332	-	96	51.852	ENSRNOG00000001199	Pop5	91	52.597	Rattus_norvegicus
ENSCSEG00000008332	-	81	57.778	ENSRBIG00000043505	POP5	96	54.305	Rhinopithecus_bieti
ENSCSEG00000008332	-	88	54.730	ENSRROG00000045063	POP5	96	54.305	Rhinopithecus_roxellana
ENSCSEG00000008332	-	88	54.730	ENSSBOG00000032691	POP5	100	57.353	Saimiri_boliviensis_boliviensis
ENSCSEG00000008332	-	88	66.667	ENSSFOG00015005630	pop5	87	68.657	Scleropages_formosus
ENSCSEG00000008332	-	92	76.282	ENSSMAG00000018868	pop5	92	76.282	Scophthalmus_maximus
ENSCSEG00000008332	-	99	74.545	ENSSDUG00000001282	-	88	78.912	Seriola_dumerili
ENSCSEG00000008332	-	99	74.545	ENSSLDG00000017031	pop5	88	79.592	Seriola_lalandi_dorsalis
ENSCSEG00000008332	-	99	74.545	ENSSLDG00000003801	-	88	79.592	Seriola_lalandi_dorsalis
ENSCSEG00000008332	-	63	55.769	ENSSARG00000005564	POP5	64	55.769	Sorex_araneus
ENSCSEG00000008332	-	88	54.422	ENSSPUG00000015531	POP5	91	53.289	Sphenodon_punctatus
ENSCSEG00000008332	-	91	78.289	ENSSPAG00000015306	pop5	92	77.922	Stegastes_partitus
ENSCSEG00000008332	-	100	50.595	ENSSSCG00000009912	POP5	89	52.632	Sus_scrofa
ENSCSEG00000008332	-	96	54.375	ENSTGUG00000009602	POP5	94	54.545	Taeniopygia_guttata
ENSCSEG00000008332	-	97	70.988	ENSTRUG00000016214	pop5	90	74.667	Takifugu_rubripes
ENSCSEG00000008332	-	99	67.073	ENSTNIG00000011465	pop5	80	77.037	Tetraodon_nigroviridis
ENSCSEG00000008332	-	81	57.778	ENSTBEG00000010131	POP5	91	53.247	Tupaia_belangeri
ENSCSEG00000008332	-	100	51.190	ENSTTRG00000000153	POP5	88	54.362	Tursiops_truncatus
ENSCSEG00000008332	-	95	49.686	ENSUAMG00000015541	POP5	71	49.669	Ursus_americanus
ENSCSEG00000008332	-	96	50.932	ENSUMAG00000006137	POP5	91	50.980	Ursus_maritimus
ENSCSEG00000008332	-	98	51.829	ENSVPAG00000010365	POP5	89	54.605	Vicugna_pacos
ENSCSEG00000008332	-	98	51.220	ENSVVUG00000021154	POP5	91	53.247	Vulpes_vulpes
ENSCSEG00000008332	-	69	52.174	ENSXETG00000031793	POP5	85	57.732	Xenopus_tropicalis
ENSCSEG00000008332	-	89	73.826	ENSXMAG00000003508	-	80	72.078	Xiphophorus_maculatus