EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSEG00000008346 (Gene tree)
Gene ID
103398421
Gene Symbol
rpl13
Alias
zgc:92272
Full Name
ribosomal protein L13
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
5966 bases
Position
chrKI934267.1:475085-481050
Accession
103398421
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000012925Ribosomal_L13ePF01294.184.3e-8411
ENSCSEP00000012936Ribosomal_L13ePF01294.184.8e-8411
ENSCSEP00000012937Ribosomal_L13ePF01294.181.5e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000013081-3639XM_008337029ENSCSEP00000012925211 (aa)XP_008335251UPI000498187E
ENSCSET00000013093-678-ENSCSEP00000012936225 (aa)--
ENSCSET00000013094-3129-ENSCSEP00000012937190 (aa)--
Gene Model
Click here to download ENSCSEG00000008346's gene model file
Pathways
Pathway IDPathway NameSource
csem03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008346's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000008346rpl1310087.204ENSG00000167526RPL1310088.095Homo_sapiens
ENSCSEG00000008346rpl1310097.630ENSAPOG00000010933rpl1310097.630Acanthochromis_polyacanthus
ENSCSEG00000008346rpl1310078.199ENSAMEG00000001111RPL1310078.199Ailuropoda_melanoleuca
ENSCSEG00000008346rpl1310096.209ENSACIG00000000422rpl1310096.209Amphilophus_citrinellus
ENSCSEG00000008346rpl1310097.630ENSAOCG00000014635rpl1310097.630Amphiprion_ocellaris
ENSCSEG00000008346rpl1310097.156ENSAPEG00000011271rpl1310097.156Amphiprion_percula
ENSCSEG00000008346rpl1310097.156ENSATEG00000004902rpl1310097.156Anabas_testudineus
ENSCSEG00000008346rpl1310089.573ENSACAG00000017072RPL1310089.573Anolis_carolinensis
ENSCSEG00000008346rpl1310087.678ENSANAG00000030539RPL1310087.678Aotus_nancymaae
ENSCSEG00000008346rpl1310096.682ENSACLG00000001642rpl1310096.682Astatotilapia_calliptera
ENSCSEG00000008346rpl1310089.100ENSAMXG00000006495rpl1310089.100Astyanax_mexicanus
ENSCSEG00000008346rpl1310079.621ENSBTAG00000033143-10079.621Bos_taurus
ENSCSEG00000008346rpl1310088.152ENSBTAG00000012044RPL137686.036Bos_taurus
ENSCSEG00000008346rpl139858.252WBGene00004425rpl-139958.252Caenorhabditis_elegans
ENSCSEG00000008346rpl1310087.678ENSCJAG00000009672-10087.678Callithrix_jacchus
ENSCSEG00000008346rpl139987.143ENSCJAG00000016268-9987.143Callithrix_jacchus
ENSCSEG00000008346rpl138854.167ENSCAFG00000002388-10053.005Canis_familiaris
ENSCSEG00000008346rpl1310088.152ENSCAFG00000019840RPL1310088.152Canis_familiaris
ENSCSEG00000008346rpl139564.179ENSCAFG00020024795-7573.750Canis_lupus_dingo
ENSCSEG00000008346rpl1310088.152ENSCAFG00020005125RPL1310088.152Canis_lupus_dingo
ENSCSEG00000008346rpl1310088.152ENSCHIG00000001441-10088.152Capra_hircus
ENSCSEG00000008346rpl139582.090ENSCHIG00000017227-9377.928Capra_hircus
ENSCSEG00000008346rpl1310072.986ENSCHIG00000026795-9771.493Capra_hircus
ENSCSEG00000008346rpl1310087.204ENSTSYG00000027423RPL1310087.204Carlito_syrichta
ENSCSEG00000008346rpl1310088.152ENSCPOG00000027348RPL1310088.152Cavia_porcellus
ENSCSEG00000008346rpl1310087.678ENSCCAG00000024248RPL1310087.678Cebus_capucinus
ENSCSEG00000008346rpl139964.762ENSCATG00000038806-9664.762Cercocebus_atys
ENSCSEG00000008346rpl1310088.152ENSCATG00000042426RPL1310088.152Cercocebus_atys
ENSCSEG00000008346rpl1310088.152ENSCLAG00000003801RPL1310088.152Chinchilla_lanigera
ENSCSEG00000008346rpl1310087.204ENSCSAG00000000476-10087.204Chlorocebus_sabaeus
ENSCSEG00000008346rpl1310088.626ENSCPBG00000013618RPL1310088.626Chrysemys_picta_bellii
ENSCSEG00000008346rpl139767.647ENSCING00000002582-9267.647Ciona_intestinalis
ENSCSEG00000008346rpl139763.235ENSCSAVG00000007075-9866.667Ciona_savignyi
ENSCSEG00000008346rpl137588.028ENSCANG00000028258RPL137788.028Colobus_angolensis_palliatus
ENSCSEG00000008346rpl1310071.564ENSCGRG00001023328-10071.564Cricetulus_griseus_chok1gshd
ENSCSEG00000008346rpl1310087.678ENSCGRG00001022563Rpl1310087.678Cricetulus_griseus_chok1gshd
ENSCSEG00000008346rpl139368.182ENSCGRG00001008381-10065.990Cricetulus_griseus_chok1gshd
ENSCSEG00000008346rpl1310087.204ENSCGRG00000014556Rpl1310087.204Cricetulus_griseus_crigri
ENSCSEG00000008346rpl138470.440ENSCGRG00000016503-10067.778Cricetulus_griseus_crigri
ENSCSEG00000008346rpl1310096.209ENSCVAG00000019742rpl1310096.209Cyprinodon_variegatus
ENSCSEG00000008346rpl1310092.891ENSDARG00000099380rpl1310092.891Danio_rerio
ENSCSEG00000008346rpl1310087.678ENSDNOG00000034247RPL1310087.678Dasypus_novemcinctus
ENSCSEG00000008346rpl138985.882ENSDORG00000028330Rpl1310085.882Dipodomys_ordii
ENSCSEG00000008346rpl139564.356FBgn0011272RpL139364.356Drosophila_melanogaster
ENSCSEG00000008346rpl138959.043ENSETEG00000004518-9959.043Echinops_telfairi
ENSCSEG00000008346rpl139874.286ENSETEG00000015057-9874.286Echinops_telfairi
ENSCSEG00000008346rpl1310068.720ENSEBUG00000000730rpl1310068.396Eptatretus_burgeri
ENSCSEG00000008346rpl139955.238ENSEEUG00000006113-9954.762Erinaceus_europaeus
ENSCSEG00000008346rpl136685.000ENSEEUG00000011190-10085.000Erinaceus_europaeus
ENSCSEG00000008346rpl1310091.469ENSELUG00000014509rpl1310091.469Esox_lucius
ENSCSEG00000008346rpl1310086.256ENSFCAG00000003338RPL1310086.256Felis_catus
ENSCSEG00000008346rpl138759.677ENSFCAG00000029961-9356.150Felis_catus
ENSCSEG00000008346rpl1310088.152ENSFALG00000003173RPL1310088.152Ficedula_albicollis
ENSCSEG00000008346rpl1310088.152ENSFDAG00000011310RPL1310088.152Fukomys_damarensis
ENSCSEG00000008346rpl1310097.630ENSFHEG00000006122rpl1310097.630Fundulus_heteroclitus
ENSCSEG00000008346rpl1310088.626ENSGMOG00000002752rpl1310087.204Gadus_morhua
ENSCSEG00000008346rpl1310088.626ENSGALG00000006179RPL1310088.626Gallus_gallus
ENSCSEG00000008346rpl1310086.730ENSGAFG00000017260rpl1310086.730Gambusia_affinis
ENSCSEG00000008346rpl1310092.417ENSGACG00000015752rpl1310092.417Gasterosteus_aculeatus
ENSCSEG00000008346rpl1310089.100ENSGAGG00000003371RPL1310089.100Gopherus_agassizii
ENSCSEG00000008346rpl1310069.668ENSGGOG00000026762-10069.668Gorilla_gorilla
ENSCSEG00000008346rpl139387.500ENSGGOG00000025427RPL1310087.500Gorilla_gorilla
ENSCSEG00000008346rpl1310096.209ENSHBUG00000013579rpl1310096.209Haplochromis_burtoni
ENSCSEG00000008346rpl1310087.678ENSHGLG00000010880RPL1310087.678Heterocephalus_glaber_female
ENSCSEG00000008346rpl1310087.678ENSHGLG00100018449RPL1310087.678Heterocephalus_glaber_male
ENSCSEG00000008346rpl1310094.787ENSHCOG00000002997rpl1310094.787Hippocampus_comes
ENSCSEG00000008346rpl1310089.573ENSIPUG00000009775rpl1310089.573Ictalurus_punctatus
ENSCSEG00000008346rpl1310085.782ENSSTOG00000011963RPL1310084.360Ictidomys_tridecemlineatus
ENSCSEG00000008346rpl1310073.934ENSJJAG00000000236-10073.934Jaculus_jaculus
ENSCSEG00000008346rpl1310087.678ENSJJAG00000014012Rpl1310087.678Jaculus_jaculus
ENSCSEG00000008346rpl1310095.735ENSKMAG00000006540rpl1310095.735Kryptolebias_marmoratus
ENSCSEG00000008346rpl1310095.735ENSLBEG00000026455rpl1310095.735Labrus_bergylta
ENSCSEG00000008346rpl136382.353ENSLACG00000005311-10082.353Latimeria_chalumnae
ENSCSEG00000008346rpl139367.232ENSLACG00000004644-9967.232Latimeria_chalumnae
ENSCSEG00000008346rpl1310088.152ENSLACG00000013768rpl1310088.152Latimeria_chalumnae
ENSCSEG00000008346rpl1310064.583ENSLACG00000000752-9864.583Latimeria_chalumnae
ENSCSEG00000008346rpl136964.394ENSLACG00000001306-9964.394Latimeria_chalumnae
ENSCSEG00000008346rpl136782.031ENSLACG00000014843-9582.031Latimeria_chalumnae
ENSCSEG00000008346rpl139767.553ENSLACG00000002299-9466.497Latimeria_chalumnae
ENSCSEG00000008346rpl1310092.891ENSLOCG00000004063rpl1310092.891Lepisosteus_oculatus
ENSCSEG00000008346rpl1310086.730ENSLAFG00000004054RPL1310086.730Loxodonta_africana
ENSCSEG00000008346rpl1310087.678ENSMFAG00000027717-10087.678Macaca_fascicularis
ENSCSEG00000008346rpl1310063.981ENSMFAG00000046109-9763.981Macaca_fascicularis
ENSCSEG00000008346rpl1310087.678ENSMMUG00000017928RPL1310087.678Macaca_mulatta
ENSCSEG00000008346rpl139962.857ENSMMUG00000038060-9662.857Macaca_mulatta
ENSCSEG00000008346rpl139964.286ENSMNEG00000030483-9664.286Macaca_nemestrina
ENSCSEG00000008346rpl139265.341ENSMNEG00000033097-8965.341Macaca_nemestrina
ENSCSEG00000008346rpl139966.190ENSMLEG00000033776-9666.190Mandrillus_leucophaeus
ENSCSEG00000008346rpl1310067.773ENSMLEG00000036728-10067.773Mandrillus_leucophaeus
ENSCSEG00000008346rpl1310098.104ENSMAMG00000021552rpl1310098.104Mastacembelus_armatus
ENSCSEG00000008346rpl1310096.682ENSMZEG00005014343rpl1310096.682Maylandia_zebra
ENSCSEG00000008346rpl139388.636ENSMGAG00000008027RPL139988.636Meleagris_gallopavo
ENSCSEG00000008346rpl1310082.938ENSMAUG00000016802-10082.938Mesocricetus_auratus
ENSCSEG00000008346rpl137586.792ENSMAUG00000020543-10086.792Mesocricetus_auratus
ENSCSEG00000008346rpl1310087.204ENSMICG00000043954-10087.204Microcebus_murinus
ENSCSEG00000008346rpl137283.007ENSMICG00000027620-8883.007Microcebus_murinus
ENSCSEG00000008346rpl1310086.730ENSMOCG00000002216-10086.730Microtus_ochrogaster
ENSCSEG00000008346rpl1310071.564ENSMOCG00000011602-10071.564Microtus_ochrogaster
ENSCSEG00000008346rpl1310078.199ENSMOCG00000021875-10075.829Microtus_ochrogaster
ENSCSEG00000008346rpl1310077.251ENSMOCG00000016985-10076.777Microtus_ochrogaster
ENSCSEG00000008346rpl1310088.152ENSMOCG00000009058-10088.152Microtus_ochrogaster
ENSCSEG00000008346rpl1310096.682ENSMMOG00000016577rpl1310096.682Mola_mola
ENSCSEG00000008346rpl1310089.100ENSMODG00000003663RPL1310089.100Monodelphis_domestica
ENSCSEG00000008346rpl1310096.209ENSMALG00000020934rpl1310096.209Monopterus_albus
ENSCSEG00000008346rpl1310088.152MGP_CAROLIEiJ_G0031676Rpl1310088.152Mus_caroli
ENSCSEG00000008346rpl1310088.152ENSMUSG00000000740Rpl1310088.152Mus_musculus
ENSCSEG00000008346rpl1310088.152MGP_PahariEiJ_G0023274Rpl1310088.152Mus_pahari
ENSCSEG00000008346rpl139483.417MGP_SPRETEiJ_G0031839-7883.417Mus_spretus
ENSCSEG00000008346rpl1310088.152MGP_SPRETEiJ_G0032794Rpl1310088.152Mus_spretus
ENSCSEG00000008346rpl139951.196ENSMPUG00000001481-9949.533Mustela_putorius_furo
ENSCSEG00000008346rpl1310088.152ENSMLUG00000010950RPL139986.036Myotis_lucifugus
ENSCSEG00000008346rpl138767.213ENSNGAG00000014655-9567.213Nannospalax_galili
ENSCSEG00000008346rpl1310087.678ENSNGAG00000018467Rpl1310087.678Nannospalax_galili
ENSCSEG00000008346rpl139459.777ENSNGAG00000012072-9959.777Nannospalax_galili
ENSCSEG00000008346rpl1310096.209ENSNBRG00000011031rpl1310096.209Neolamprologus_brichardi
ENSCSEG00000008346rpl1310087.678ENSNLEG00000015774RPL1310087.678Nomascus_leucogenys
ENSCSEG00000008346rpl1310069.340ENSNLEG00000028759-10069.811Nomascus_leucogenys
ENSCSEG00000008346rpl1310082.938ENSODEG00000019351-10082.938Octodon_degus
ENSCSEG00000008346rpl1310084.360ENSODEG00000019915-10084.360Octodon_degus
ENSCSEG00000008346rpl1310087.204ENSODEG00000004235-10087.204Octodon_degus
ENSCSEG00000008346rpl1310085.782ENSODEG00000019297-10085.782Octodon_degus
ENSCSEG00000008346rpl1310087.204ENSODEG00000019458-10087.204Octodon_degus
ENSCSEG00000008346rpl1310085.308ENSODEG00000020384-10085.308Octodon_degus
ENSCSEG00000008346rpl1310096.209ENSONIG00000005934rpl1310096.209Oreochromis_niloticus
ENSCSEG00000008346rpl1310087.678ENSOANG00000006729RPL1310087.678Ornithorhynchus_anatinus
ENSCSEG00000008346rpl1310081.043ENSOCUG00000007536-10080.569Oryctolagus_cuniculus
ENSCSEG00000008346rpl1310082.938ENSOCUG00000022399-10083.412Oryctolagus_cuniculus
ENSCSEG00000008346rpl1310083.886ENSOCUG00000024415-10084.360Oryctolagus_cuniculus
ENSCSEG00000008346rpl1310096.682ENSORLG00000007654rpl1310096.682Oryzias_latipes
ENSCSEG00000008346rpl1310096.682ENSORLG00020009960rpl1310096.682Oryzias_latipes_hni
ENSCSEG00000008346rpl1310096.682ENSORLG00015008108rpl1310096.682Oryzias_latipes_hsok
ENSCSEG00000008346rpl1310097.156ENSOMEG00000001728rpl1310097.156Oryzias_melastigma
ENSCSEG00000008346rpl1310088.152ENSOGAG00000026444RPL1310088.152Otolemur_garnettii
ENSCSEG00000008346rpl135364.356ENSOARG00000011291-6164.356Ovis_aries
ENSCSEG00000008346rpl1310080.569ENSOARG00000003957-7478.829Ovis_aries
ENSCSEG00000008346rpl1310068.720ENSPPAG00000041631-10068.720Pan_paniscus
ENSCSEG00000008346rpl139287.429ENSPPAG00000029415-10087.429Pan_paniscus
ENSCSEG00000008346rpl139982.381ENSPPAG00000042590-9980.275Pan_paniscus
ENSCSEG00000008346rpl1310086.256ENSPPRG00000003949RPL1310086.256Panthera_pardus
ENSCSEG00000008346rpl138459.341ENSPPRG00000006057-8656.111Panthera_pardus
ENSCSEG00000008346rpl136883.846ENSPTIG00000010985RPL138683.846Panthera_tigris_altaica
ENSCSEG00000008346rpl138459.341ENSPTIG00000014719-8656.111Panthera_tigris_altaica
ENSCSEG00000008346rpl1310068.246ENSPTRG00000047911-10068.246Pan_troglodytes
ENSCSEG00000008346rpl1310087.678ENSPTRG00000008480RPL1310087.678Pan_troglodytes
ENSCSEG00000008346rpl1310082.464ENSPTRG00000041770-10082.464Pan_troglodytes
ENSCSEG00000008346rpl1310088.152ENSPANG00000031667RPL1310088.152Papio_anubis
ENSCSEG00000008346rpl1310091.469ENSPKIG00000001789rpl1310091.469Paramormyrops_kingsleyae
ENSCSEG00000008346rpl1310089.573ENSPSIG00000015634RPL1310089.573Pelodiscus_sinensis
ENSCSEG00000008346rpl1310096.209ENSPMGG00000006067rpl1310096.209Periophthalmus_magnuspinnatus
ENSCSEG00000008346rpl1310088.152ENSPEMG00000010342Rpl1310088.152Peromyscus_maniculatus_bairdii
ENSCSEG00000008346rpl1310096.682ENSPFOG00000013435rpl1310096.682Poecilia_formosa
ENSCSEG00000008346rpl1310096.682ENSPLAG00000004085rpl1310096.682Poecilia_latipinna
ENSCSEG00000008346rpl1310096.682ENSPMEG00000015599rpl1310096.682Poecilia_mexicana
ENSCSEG00000008346rpl1310096.209ENSPREG00000023190rpl1310096.209Poecilia_reticulata
ENSCSEG00000008346rpl1310086.730ENSPCAG00000015461RPL1310086.730Procavia_capensis
ENSCSEG00000008346rpl1310088.152ENSPCOG00000024647RPL1310088.152Propithecus_coquereli
ENSCSEG00000008346rpl1310085.308ENSPVAG00000015130RPL1310085.308Pteropus_vampyrus
ENSCSEG00000008346rpl1310096.209ENSPNYG00000013189rpl1310096.209Pundamilia_nyererei
ENSCSEG00000008346rpl1310091.469ENSPNAG00000002916rpl1310091.469Pygocentrus_nattereri
ENSCSEG00000008346rpl1310086.256ENSRNOG00000061438LOC10036049110086.256Rattus_norvegicus
ENSCSEG00000008346rpl1310082.464ENSRNOG00000029227AABR07054469.110082.464Rattus_norvegicus
ENSCSEG00000008346rpl1310087.678ENSRNOG00000015335Rpl1310087.678Rattus_norvegicus
ENSCSEG00000008346rpl1310086.730ENSRNOG00000055911LOC10036125910086.730Rattus_norvegicus
ENSCSEG00000008346rpl139981.905ENSRNOG00000059545AC114446.110079.717Rattus_norvegicus
ENSCSEG00000008346rpl1310088.152ENSRBIG00000031937RPL1310088.152Rhinopithecus_bieti
ENSCSEG00000008346rpl139966.190ENSRBIG00000010434-9364.840Rhinopithecus_bieti
ENSCSEG00000008346rpl1310088.152ENSRROG00000036999-10088.152Rhinopithecus_roxellana
ENSCSEG00000008346rpl139966.190ENSRROG00000025626-9364.840Rhinopithecus_roxellana
ENSCSEG00000008346rpl139248.969YDL082WRPL13A10050.237Saccharomyces_cerevisiae
ENSCSEG00000008346rpl139249.485YMR142CRPL13B10050.711Saccharomyces_cerevisiae
ENSCSEG00000008346rpl1310087.678ENSSBOG00000028589-10087.678Saimiri_boliviensis_boliviensis
ENSCSEG00000008346rpl1310067.773ENSSBOG00000019618-10067.773Saimiri_boliviensis_boliviensis
ENSCSEG00000008346rpl138156.140ENSSHAG00000010433-9956.140Sarcophilus_harrisii
ENSCSEG00000008346rpl1310092.891ENSSFOG00015019594rpl1310092.891Scleropages_formosus
ENSCSEG00000008346rpl1310095.261ENSSMAG00000021443rpl1310095.261Scophthalmus_maximus
ENSCSEG00000008346rpl1310097.630ENSSDUG00000001262rpl1310097.630Seriola_dumerili
ENSCSEG00000008346rpl139652.153ENSSLDG00000007067-9452.195Seriola_lalandi_dorsalis
ENSCSEG00000008346rpl1310097.630ENSSLDG00000021182rpl1310097.630Seriola_lalandi_dorsalis
ENSCSEG00000008346rpl137686.875ENSSPUG00000006904RPL138986.875Sphenodon_punctatus
ENSCSEG00000008346rpl1310097.630ENSSPAG00000020434rpl1310097.630Stegastes_partitus
ENSCSEG00000008346rpl139964.286ENSSSCG00000003723-9964.286Sus_scrofa
ENSCSEG00000008346rpl139953.023ENSSSCG00000029020-9653.023Sus_scrofa
ENSCSEG00000008346rpl139957.895ENSSSCG00000033294-9957.971Sus_scrofa
ENSCSEG00000008346rpl1310087.204ENSSSCG00000024974RPL1310087.204Sus_scrofa
ENSCSEG00000008346rpl1310063.507ENSSSCG00000036198-10063.507Sus_scrofa
ENSCSEG00000008346rpl139961.538ENSSSCG00000007813-9961.538Sus_scrofa
ENSCSEG00000008346rpl1310086.256ENSTGUG00000007874RPL1310086.256Taeniopygia_guttata
ENSCSEG00000008346rpl1310095.261ENSTRUG00000021170rpl1310095.261Takifugu_rubripes
ENSCSEG00000008346rpl1310095.735ENSTNIG00000009349rpl1310095.735Tetraodon_nigroviridis
ENSCSEG00000008346rpl1310088.152ENSTTRG00000004374RPL1310088.152Tursiops_truncatus
ENSCSEG00000008346rpl1310087.678ENSUAMG00000020363RPL1310087.678Ursus_americanus
ENSCSEG00000008346rpl136679.365ENSVPAG00000000569-10079.365Vicugna_pacos
ENSCSEG00000008346rpl1310080.569ENSVVUG00000003839-10080.569Vulpes_vulpes
ENSCSEG00000008346rpl139451.220ENSVVUG00000005779-9249.048Vulpes_vulpes
ENSCSEG00000008346rpl1310084.360ENSXETG00000019835rpl1310084.360Xenopus_tropicalis
ENSCSEG00000008346rpl1310096.209ENSXCOG00000011315rpl1310096.209Xiphophorus_couchianus
ENSCSEG00000008346rpl1310096.682ENSXMAG00000003221rpl1310096.682Xiphophorus_maculatus

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