EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000008352 (Gene tree)
Gene ID
103396929
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
19846 bases
Position
chrW:2025478-2045323
Accession
103396929
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000012957RRM_1PF00076.228.2e-3312
ENSCSEP00000012957RRM_1PF00076.228.2e-3322
ENSCSEP00000012951RRM_1PF00076.229.8e-3312
ENSCSEP00000012951RRM_1PF00076.229.8e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000013108-5019XM_017042753ENSCSEP00000012951348 (aa)XP_016898242UPI0007DC92B7
ENSCSET00000013115-4962-ENSCSEP00000012957329 (aa)--
Gene Model
Click here to download ENSCSEG00000008352's gene model file
Pathways
Pathway IDPathway NameSource
csem03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008352's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000008352-5640.642ENSCSEG00000005613HNRNPA39432.000
ENSCSEG00000008352-7861.224ENSCSEG00000013557msi2a8361.224
ENSCSEG00000008352-5345.665ENSCSEG00000010345-8436.981
ENSCSEG00000008352-6731.780ENSCSEG00000014051-8732.075
ENSCSEG00000008352-5434.637ENSCSEG00000003421hnrnpa0b7232.636
ENSCSEG00000008352-5940.909ENSCSEG00000007589hnrnpa1a7141.989
ENSCSEG00000008352-5336.634ENSCSEG00000011697-5136.709
ENSCSEG00000008352-6343.810ENSCSEG00000010909hnrnpd7740.637
ENSCSEG00000008352-5776.471ENSCSEG00000013549msi2a7776.471
ENSCSEG00000008352-10065.861ENSCSEG00000003266-10065.861
ENSCSEG00000008352-9495.779ENSCSEG00000011032MSI110095.779
ENSCSEG00000008352-5635.676ENSCSEG00000005274tardbpl6533.495
ENSCSEG00000008352-5745.989ENSCSEG00000011636hnrnpaba7941.964
ENSCSEG00000008352-10091.429ENSCSEG00000005834-10091.429
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000008352-10083.149ENSG00000135097MSI19985.776Homo_sapiens
ENSCSEG00000008352-10091.143ENSAPOG00000003191MSI110091.143Acanthochromis_polyacanthus
ENSCSEG00000008352-10097.135ENSAPOG00000023458-10097.135Acanthochromis_polyacanthus
ENSCSEG00000008352-9466.575ENSAMEG00000013302MSI110066.575Ailuropoda_melanoleuca
ENSCSEG00000008352-9585.714ENSACIG00000017754-7888.673Amphilophus_citrinellus
ENSCSEG00000008352-9491.987ENSAOCG00000009031-9591.987Amphiprion_ocellaris
ENSCSEG00000008352-10091.143ENSAOCG00000003804MSI110091.143Amphiprion_ocellaris
ENSCSEG00000008352-10097.135ENSAPEG00000006857-8497.135Amphiprion_percula
ENSCSEG00000008352-10091.143ENSAPEG00000003245MSI110091.143Amphiprion_percula
ENSCSEG00000008352-10082.720ENSATEG00000023779-10082.720Anabas_testudineus
ENSCSEG00000008352-10093.239ENSATEG00000017059MSI110093.239Anabas_testudineus
ENSCSEG00000008352-10083.934ENSACAG00000002762MSI110083.934Anolis_carolinensis
ENSCSEG00000008352-10083.149ENSANAG00000027151MSI110083.149Aotus_nancymaae
ENSCSEG00000008352-8382.639ENSANAG00000027901-8982.639Aotus_nancymaae
ENSCSEG00000008352-10098.563ENSACLG00000000117-10098.777Astatotilapia_calliptera
ENSCSEG00000008352-10090.883ENSACLG00000011230MSI110090.883Astatotilapia_calliptera
ENSCSEG00000008352-9492.163ENSAMXG00000038960msi17692.163Astyanax_mexicanus
ENSCSEG00000008352-10083.149ENSBTAG00000009800MSI110085.714Bos_taurus
ENSCSEG00000008352-10083.149ENSCJAG00000008578MSI110085.759Callithrix_jacchus
ENSCSEG00000008352-10082.873ENSCAFG00000010283MSI110082.873Canis_familiaris
ENSCSEG00000008352-9484.566ENSCAFG00020020585MSI110084.566Canis_lupus_dingo
ENSCSEG00000008352-10080.926ENSCHIG00000024304MSI110080.926Capra_hircus
ENSCSEG00000008352-9483.792ENSTSYG00000033949MSI19583.792Carlito_syrichta
ENSCSEG00000008352-9475.399ENSCAPG00000003919MSI18975.399Cavia_aperea
ENSCSEG00000008352-9584.302ENSCPOG00000012361MSI110084.503Cavia_porcellus
ENSCSEG00000008352-10083.149ENSCCAG00000035567MSI110083.149Cebus_capucinus
ENSCSEG00000008352-10083.149ENSCATG00000030019MSI110083.149Cercocebus_atys
ENSCSEG00000008352-9782.720ENSCLAG00000011329MSI110084.503Chinchilla_lanigera
ENSCSEG00000008352-7488.115ENSCSAG00000002265MSI19683.394Chlorocebus_sabaeus
ENSCSEG00000008352-10086.610ENSCPBG00000011349MSI110086.610Chrysemys_picta_bellii
ENSCSEG00000008352-9483.841ENSCANG00000040651MSI110083.841Colobus_angolensis_palliatus
ENSCSEG00000008352-10083.149ENSCGRG00001018883Msi110083.149Cricetulus_griseus_chok1gshd
ENSCSEG00000008352-9483.891ENSCGRG00000002191Msi17283.891Cricetulus_griseus_crigri
ENSCSEG00000008352-5465.672ENSCVAG00000017430zgc:1107969465.672Cyprinodon_variegatus
ENSCSEG00000008352-10097.414ENSCVAG00000009100MSI110097.414Cyprinodon_variegatus
ENSCSEG00000008352-6272.811ENSCVAG00000017463-8972.811Cyprinodon_variegatus
ENSCSEG00000008352-7990.698ENSDARG00000102015CABZ01037298.19890.698Danio_rerio
ENSCSEG00000008352-9493.243ENSDARG00000010710msi110092.523Danio_rerio
ENSCSEG00000008352-9481.329ENSDNOG00000005713MSI19181.329Dasypus_novemcinctus
ENSCSEG00000008352-9483.234ENSDORG00000005610Msi19483.234Dipodomys_ordii
ENSCSEG00000008352-9481.402ENSETEG00000004756MSI110081.402Echinops_telfairi
ENSCSEG00000008352-10084.257ENSEASG00005004736MSI110084.257Equus_asinus_asinus
ENSCSEG00000008352-10083.149ENSECAG00000017526MSI110083.149Equus_caballus
ENSCSEG00000008352-9486.604ENSELUG00000023280-10086.293Esox_lucius
ENSCSEG00000008352-9688.393ENSELUG00000023219MSI19289.398Esox_lucius
ENSCSEG00000008352-10083.149ENSFCAG00000011007MSI110083.149Felis_catus
ENSCSEG00000008352-9488.333ENSFALG00000007574MSI110088.333Ficedula_albicollis
ENSCSEG00000008352-9483.537ENSFDAG00000019586MSI110083.537Fukomys_damarensis
ENSCSEG00000008352-10096.562ENSFHEG00000022446MSI110096.562Fundulus_heteroclitus
ENSCSEG00000008352-10091.143ENSFHEG00000003560-10091.143Fundulus_heteroclitus
ENSCSEG00000008352-10095.115ENSGMOG00000001006MSI19994.828Gadus_morhua
ENSCSEG00000008352-10081.586ENSGMOG00000017838-10081.586Gadus_morhua
ENSCSEG00000008352-9487.786ENSGALG00000007227MSI19875.806Gallus_gallus
ENSCSEG00000008352-9491.159ENSGAFG00000021522MSI19491.159Gambusia_affinis
ENSCSEG00000008352-10079.518ENSGAFG00000005860-10079.518Gambusia_affinis
ENSCSEG00000008352-10095.989ENSGACG00000012679MSI110095.989Gasterosteus_aculeatus
ENSCSEG00000008352-10083.380ENSGACG00000008674-10083.380Gasterosteus_aculeatus
ENSCSEG00000008352-10087.952ENSGAGG00000016037MSI110087.952Gopherus_agassizii
ENSCSEG00000008352-9484.395ENSGGOG00000010328MSI110084.395Gorilla_gorilla
ENSCSEG00000008352-10090.883ENSHBUG00000021921MSI110090.883Haplochromis_burtoni
ENSCSEG00000008352-10098.563ENSHBUG00000011841-10098.563Haplochromis_burtoni
ENSCSEG00000008352-10082.873ENSHGLG00000012782MSI110082.873Heterocephalus_glaber_female
ENSCSEG00000008352-9483.537ENSHGLG00100016848MSI110083.537Heterocephalus_glaber_male
ENSCSEG00000008352-10091.761ENSHCOG00000012067-10091.761Hippocampus_comes
ENSCSEG00000008352-9489.935ENSHCOG00000012019MSI110089.935Hippocampus_comes
ENSCSEG00000008352-10090.544ENSIPUG00000001976msi110090.544Ictalurus_punctatus
ENSCSEG00000008352-9484.566ENSSTOG00000009799MSI110084.566Ictidomys_tridecemlineatus
ENSCSEG00000008352-10083.149ENSJJAG00000010463Msi110083.149Jaculus_jaculus
ENSCSEG00000008352-10073.851ENSJJAG00000010643-10073.851Jaculus_jaculus
ENSCSEG00000008352-9491.234ENSKMAG00000019877-10091.234Kryptolebias_marmoratus
ENSCSEG00000008352-10097.414ENSKMAG00000011251MSI110097.414Kryptolebias_marmoratus
ENSCSEG00000008352-10091.143ENSLBEG00000001375-10091.143Labrus_bergylta
ENSCSEG00000008352-10096.848ENSLBEG00000008789MSI110096.848Labrus_bergylta
ENSCSEG00000008352-9483.041ENSLACG00000018287MSI110083.041Latimeria_chalumnae
ENSCSEG00000008352-5578.182ENSLOCG00000008618zgc:1107967178.182Lepisosteus_oculatus
ENSCSEG00000008352-9076.393ENSLAFG00000009412MSI110076.393Loxodonta_africana
ENSCSEG00000008352-9484.503ENSMFAG00000001798MSI110084.503Macaca_fascicularis
ENSCSEG00000008352-9484.503ENSMMUG00000031527MSI19882.955Macaca_mulatta
ENSCSEG00000008352-10084.257ENSMNEG00000040034MSI110084.257Macaca_nemestrina
ENSCSEG00000008352-9483.841ENSMLEG00000003921MSI110083.841Mandrillus_leucophaeus
ENSCSEG00000008352-10097.701ENSMAMG00000002279MSI110097.701Mastacembelus_armatus
ENSCSEG00000008352-10090.571ENSMAMG00000018426-10090.571Mastacembelus_armatus
ENSCSEG00000008352-10090.883ENSMZEG00005026892MSI110090.883Maylandia_zebra
ENSCSEG00000008352-10098.563ENSMZEG00005000340-10098.563Maylandia_zebra
ENSCSEG00000008352-6792.899ENSMGAG00000016518-10092.899Meleagris_gallopavo
ENSCSEG00000008352-6890.625ENSMAUG00000016820Msi110088.477Mesocricetus_auratus
ENSCSEG00000008352-10083.149ENSMICG00000033181MSI110083.149Microcebus_murinus
ENSCSEG00000008352-10082.873ENSMOCG00000002286Msi110082.873Microtus_ochrogaster
ENSCSEG00000008352-10085.714ENSMMOG00000012265-10085.714Mola_mola
ENSCSEG00000008352-9490.939ENSMMOG00000010492MSI19690.939Mola_mola
ENSCSEG00000008352-9157.530ENSMODG00000003189-10057.530Monodelphis_domestica
ENSCSEG00000008352-9491.437ENSMALG00000001426-10091.437Monopterus_albus
ENSCSEG00000008352-10098.276ENSMALG00000017889MSI110098.276Monopterus_albus
ENSCSEG00000008352-10082.597MGP_CAROLIEiJ_G0027626Msi19887.452Mus_caroli
ENSCSEG00000008352-10082.597ENSMUSG00000054256Msi19887.452Mus_musculus
ENSCSEG00000008352-10085.714MGP_PahariEiJ_G0024206Msi19888.168Mus_pahari
ENSCSEG00000008352-10082.597MGP_SPRETEiJ_G0028624Msi19887.452Mus_spretus
ENSCSEG00000008352-9484.566ENSMPUG00000003168MSI110084.566Mustela_putorius_furo
ENSCSEG00000008352-9475.298ENSMLUG00000010313MSI110075.298Myotis_lucifugus
ENSCSEG00000008352-9483.891ENSNGAG00000014508Msi19183.891Nannospalax_galili
ENSCSEG00000008352-8982.787ENSNBRG00000018012MSI19982.787Neolamprologus_brichardi
ENSCSEG00000008352-10098.563ENSNBRG00000000841-10098.563Neolamprologus_brichardi
ENSCSEG00000008352-9074.695ENSNLEG00000015636MSI110074.695Nomascus_leucogenys
ENSCSEG00000008352-9464.024ENSMEUG00000015759MSI110064.024Notamacropus_eugenii
ENSCSEG00000008352-9177.143ENSOPRG00000016879MSI110077.143Ochotona_princeps
ENSCSEG00000008352-9483.841ENSODEG00000006328MSI110083.841Octodon_degus
ENSCSEG00000008352-10087.363ENSONIG00000019452-10087.363Oreochromis_niloticus
ENSCSEG00000008352-10098.563ENSONIG00000011182MSI110098.563Oreochromis_niloticus
ENSCSEG00000008352-9484.566ENSOCUG00000027716MSI110084.566Oryctolagus_cuniculus
ENSCSEG00000008352-10090.000ENSORLG00000029593MSI110090.000Oryzias_latipes
ENSCSEG00000008352-10097.421ENSORLG00000019978-10097.421Oryzias_latipes
ENSCSEG00000008352-10097.421ENSORLG00020001208-7197.421Oryzias_latipes_hni
ENSCSEG00000008352-10090.000ENSORLG00020008266MSI19989.590Oryzias_latipes_hni
ENSCSEG00000008352-10097.421ENSORLG00015013672-7697.273Oryzias_latipes_hsok
ENSCSEG00000008352-10090.000ENSORLG00015003916MSI110090.000Oryzias_latipes_hsok
ENSCSEG00000008352-10097.421ENSOMEG00000017536MSI110097.421Oryzias_melastigma
ENSCSEG00000008352-10090.286ENSOMEG00000002272-10090.286Oryzias_melastigma
ENSCSEG00000008352-9981.044ENSOGAG00000003847MSI19981.044Otolemur_garnettii
ENSCSEG00000008352-9480.909ENSOARG00000012097MSI110080.909Ovis_aries
ENSCSEG00000008352-9483.841ENSPPAG00000043073MSI110083.841Pan_paniscus
ENSCSEG00000008352-10083.149ENSPPRG00000000370MSI110083.149Panthera_pardus
ENSCSEG00000008352-9484.566ENSPTIG00000008913MSI110084.566Panthera_tigris_altaica
ENSCSEG00000008352-10083.149ENSPTRG00000005531MSI110083.149Pan_troglodytes
ENSCSEG00000008352-10082.873ENSPANG00000006335MSI110082.873Papio_anubis
ENSCSEG00000008352-10092.401ENSPKIG00000016497MSI110092.401Paramormyrops_kingsleyae
ENSCSEG00000008352-10092.241ENSPKIG00000023575-10092.241Paramormyrops_kingsleyae
ENSCSEG00000008352-7980.263ENSPSIG00000009621-10080.263Pelodiscus_sinensis
ENSCSEG00000008352-5185.965ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSCSEG00000008352-9485.671ENSPSIG00000011608-9385.671Pelodiscus_sinensis
ENSCSEG00000008352-9474.242ENSPMGG00000007743-9272.446Periophthalmus_magnuspinnatus
ENSCSEG00000008352-9097.973ENSPMGG00000000514MSI19797.973Periophthalmus_magnuspinnatus
ENSCSEG00000008352-9482.493ENSPEMG00000010491Msi19582.493Peromyscus_maniculatus_bairdii
ENSCSEG00000008352-10097.135ENSPFOG00000013113MSI110097.135Poecilia_formosa
ENSCSEG00000008352-10090.571ENSPFOG00000008319-8690.571Poecilia_formosa
ENSCSEG00000008352-10090.571ENSPLAG00000012431-9790.571Poecilia_latipinna
ENSCSEG00000008352-10097.135ENSPLAG00000014025-10097.135Poecilia_latipinna
ENSCSEG00000008352-10097.135ENSPMEG00000012796MSI110097.135Poecilia_mexicana
ENSCSEG00000008352-10090.000ENSPMEG00000007025-9385.350Poecilia_mexicana
ENSCSEG00000008352-9588.818ENSPREG00000021416-9588.818Poecilia_reticulata
ENSCSEG00000008352-7592.079ENSPREG00000014574-10092.079Poecilia_reticulata
ENSCSEG00000008352-10082.320ENSPPYG00000005027MSI110082.320Pongo_abelii
ENSCSEG00000008352-7687.817ENSPCAG00000002300MSI17287.817Procavia_capensis
ENSCSEG00000008352-10083.149ENSPCOG00000017341MSI110083.149Propithecus_coquereli
ENSCSEG00000008352-9468.293ENSPVAG00000002225MSI110068.293Pteropus_vampyrus
ENSCSEG00000008352-10090.883ENSPNYG00000004379MSI110090.883Pundamilia_nyererei
ENSCSEG00000008352-10098.563ENSPNYG00000002529-10098.563Pundamilia_nyererei
ENSCSEG00000008352-10091.404ENSPNAG00000019337msi110091.404Pygocentrus_nattereri
ENSCSEG00000008352-9484.244ENSRNOG00000001156Msi110084.244Rattus_norvegicus
ENSCSEG00000008352-9484.566ENSRBIG00000036889MSI110084.566Rhinopithecus_bieti
ENSCSEG00000008352-9483.636ENSRROG00000041076MSI19383.636Rhinopithecus_roxellana
ENSCSEG00000008352-9484.503ENSSBOG00000030259MSI19984.503Saimiri_boliviensis_boliviensis
ENSCSEG00000008352-9474.510ENSSHAG00000006834MSI110074.510Sarcophilus_harrisii
ENSCSEG00000008352-9493.598ENSSFOG00015014964-9593.598Scleropages_formosus
ENSCSEG00000008352-9492.880ENSSFOG00015005350MSI110092.880Scleropages_formosus
ENSCSEG00000008352-10089.697ENSSMAG00000018824MSI110089.697Scophthalmus_maximus
ENSCSEG00000008352-9491.571ENSSMAG00000009156-7389.604Scophthalmus_maximus
ENSCSEG00000008352-10097.708ENSSDUG00000001027MSI110097.708Seriola_dumerili
ENSCSEG00000008352-10091.429ENSSDUG00000022697-10091.429Seriola_dumerili
ENSCSEG00000008352-10097.708ENSSLDG00000016832MSI110097.708Seriola_lalandi_dorsalis
ENSCSEG00000008352-10082.507ENSSLDG00000018706-10082.507Seriola_lalandi_dorsalis
ENSCSEG00000008352-10086.325ENSSPUG00000015741MSI110086.325Sphenodon_punctatus
ENSCSEG00000008352-5784.375ENSSPAG00000015573zgc:1107968284.375Stegastes_partitus
ENSCSEG00000008352-9491.935ENSSPAG00000013098-10091.768Stegastes_partitus
ENSCSEG00000008352-7587.435ENSSPAG00000014085-10087.435Stegastes_partitus
ENSCSEG00000008352-10083.965ENSSSCG00000029365MSI110084.244Sus_scrofa
ENSCSEG00000008352-9485.588ENSTGUG00000009534MSI110085.588Taeniopygia_guttata
ENSCSEG00000008352-9485.135ENSTRUG00000015636-7985.135Takifugu_rubripes
ENSCSEG00000008352-8986.166ENSTRUG00000016249MSI110086.166Takifugu_rubripes
ENSCSEG00000008352-5390.722ENSTRUG00000021586-9990.722Takifugu_rubripes
ENSCSEG00000008352-9965.257ENSTNIG00000019814-9965.257Tetraodon_nigroviridis
ENSCSEG00000008352-10093.162ENSTNIG00000011469MSI110093.162Tetraodon_nigroviridis
ENSCSEG00000008352-9475.092ENSTBEG00000007182MSI110075.092Tupaia_belangeri
ENSCSEG00000008352-7687.594ENSTTRG00000005663MSI17887.594Tursiops_truncatus
ENSCSEG00000008352-7981.140ENSUAMG00000015514MSI19487.037Ursus_americanus
ENSCSEG00000008352-9481.879ENSUMAG00000006176MSI18881.879Ursus_maritimus
ENSCSEG00000008352-9483.891ENSVVUG00000020993MSI110083.183Vulpes_vulpes
ENSCSEG00000008352-10084.195ENSXETG00000012216msi110084.195Xenopus_tropicalis
ENSCSEG00000008352-9478.641ENSXCOG00000017605MSI18978.641Xiphophorus_couchianus
ENSCSEG00000008352-10090.286ENSXMAG00000018237-10090.286Xiphophorus_maculatus
ENSCSEG00000008352-10097.414ENSXMAG00000027103MSI110089.286Xiphophorus_maculatus

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