EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008368 (Gene tree)
Gene ID: 103389660
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10541 bases
Position: chr14:12676495-12687035
Accession: 103389660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012964	ResIII	PF04851.15	1.8e-06	1	1
ENSCSEP00000012964	DEAD	PF00270.29	2.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013122	-	2057	XM_008325168	ENSCSEP00000012964	561 (aa)	XP_008323390	UPI000497ABA5

Gene Model

Click here to download ENSCSEG00000008368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008368	ddx56	71	31.156	ENSCSEG00000007687	ddx47	80	31.156
ENSCSEG00000008368	ddx56	74	30.622	ENSCSEG00000020260	ddx27	51	30.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008368	ddx56	98	64.568	ENSG00000136271	DDX56	98	71.978	Homo_sapiens
ENSCSEG00000008368	ddx56	100	85.231	ENSAPOG00000017113	ddx56	100	84.520	Acanthochromis_polyacanthus
ENSCSEG00000008368	ddx56	98	64.093	ENSAMEG00000017711	DDX56	98	64.093	Ailuropoda_melanoleuca
ENSCSEG00000008368	ddx56	95	71.776	ENSACIG00000013747	ddx56	99	84.699	Amphilophus_citrinellus
ENSCSEG00000008368	ddx56	89	87.200	ENSAOCG00000018059	ddx56	94	87.200	Amphiprion_ocellaris
ENSCSEG00000008368	ddx56	87	87.269	ENSAOCG00000015447	-	87	87.269	Amphiprion_ocellaris
ENSCSEG00000008368	ddx56	100	84.135	ENSAPEG00000007267	ddx56	100	83.422	Amphiprion_percula
ENSCSEG00000008368	ddx56	99	82.679	ENSATEG00000005279	ddx56	100	82.679	Anabas_testudineus
ENSCSEG00000008368	ddx56	100	82.709	ENSACLG00000020113	ddx56	100	82.531	Astatotilapia_calliptera
ENSCSEG00000008368	ddx56	99	73.535	ENSAMXG00000019357	ddx56	99	73.665	Astyanax_mexicanus
ENSCSEG00000008368	ddx56	99	63.830	ENSBTAG00000010602	DDX56	98	64.464	Bos_taurus
ENSCSEG00000008368	ddx56	97	39.893	WBGene00016073	C24H12.4	86	39.893	Caenorhabditis_elegans
ENSCSEG00000008368	ddx56	98	64.748	ENSCJAG00000012233	DDX56	98	64.158	Callithrix_jacchus
ENSCSEG00000008368	ddx56	81	60.917	ENSCAFG00000029295	DDX56	99	61.874	Canis_familiaris
ENSCSEG00000008368	ddx56	98	61.552	ENSCAFG00020019695	DDX56	98	62.162	Canis_lupus_dingo
ENSCSEG00000008368	ddx56	98	64.695	ENSCHIG00000014261	DDX56	98	64.516	Capra_hircus
ENSCSEG00000008368	ddx56	98	63.604	ENSTSYG00000008048	DDX56	98	64.324	Carlito_syrichta
ENSCSEG00000008368	ddx56	86	63.430	ENSCAPG00000006286	DDX56	98	63.017	Cavia_aperea
ENSCSEG00000008368	ddx56	99	64.991	ENSCPOG00000003359	DDX56	98	64.632	Cavia_porcellus
ENSCSEG00000008368	ddx56	90	67.647	ENSCCAG00000025303	DDX56	98	63.849	Cebus_capucinus
ENSCSEG00000008368	ddx56	98	64.057	ENSCATG00000039389	DDX56	98	63.849	Cercocebus_atys
ENSCSEG00000008368	ddx56	99	63.799	ENSCLAG00000007666	DDX56	98	63.899	Chinchilla_lanigera
ENSCSEG00000008368	ddx56	98	64.209	ENSCSAG00000015636	DDX56	98	64.029	Chlorocebus_sabaeus
ENSCSEG00000008368	ddx56	98	69.395	ENSCPBG00000024556	DDX56	99	69.217	Chrysemys_picta_bellii
ENSCSEG00000008368	ddx56	90	59.332	ENSCING00000005185	-	98	59.332	Ciona_intestinalis
ENSCSEG00000008368	ddx56	88	59.000	ENSCSAVG00000011266	-	99	59.719	Ciona_savignyi
ENSCSEG00000008368	ddx56	99	63.943	ENSCANG00000028187	DDX56	99	63.766	Colobus_angolensis_palliatus
ENSCSEG00000008368	ddx56	99	64.580	ENSCGRG00001019019	Ddx56	98	63.864	Cricetulus_griseus_chok1gshd
ENSCSEG00000008368	ddx56	99	64.580	ENSCGRG00000011870	Ddx56	98	63.864	Cricetulus_griseus_crigri
ENSCSEG00000008368	ddx56	100	80.284	ENSCVAG00000006499	ddx56	100	80.462	Cyprinodon_variegatus
ENSCSEG00000008368	ddx56	99	77.321	ENSDARG00000020913	ddx56	99	78.036	Danio_rerio
ENSCSEG00000008368	ddx56	87	62.834	ENSDNOG00000036526	DDX56	97	62.857	Dasypus_novemcinctus
ENSCSEG00000008368	ddx56	91	51.931	FBgn0001565	Hlc	90	51.845	Drosophila_melanogaster
ENSCSEG00000008368	ddx56	85	44.375	ENSETEG00000019559	-	100	44.375	Echinops_telfairi
ENSCSEG00000008368	ddx56	63	75.000	ENSETEG00000002969	-	64	75.000	Echinops_telfairi
ENSCSEG00000008368	ddx56	97	64.811	ENSEBUG00000009986	ddx56	99	65.523	Eptatretus_burgeri
ENSCSEG00000008368	ddx56	98	63.063	ENSEASG00005017795	DDX56	98	63.604	Equus_asinus_asinus
ENSCSEG00000008368	ddx56	98	62.883	ENSECAG00000019897	DDX56	98	63.423	Equus_caballus
ENSCSEG00000008368	ddx56	78	66.742	ENSEEUG00000004849	DDX56	91	67.356	Erinaceus_europaeus
ENSCSEG00000008368	ddx56	100	80.927	ENSELUG00000004150	ddx56	100	80.749	Esox_lucius
ENSCSEG00000008368	ddx56	98	63.063	ENSFCAG00000010261	DDX56	98	63.063	Felis_catus
ENSCSEG00000008368	ddx56	99	64.171	ENSFDAG00000007128	DDX56	99	63.458	Fukomys_damarensis
ENSCSEG00000008368	ddx56	100	78.470	ENSFHEG00000018008	ddx56	96	85.000	Fundulus_heteroclitus
ENSCSEG00000008368	ddx56	100	73.451	ENSGAFG00000006906	ddx56	99	73.310	Gambusia_affinis
ENSCSEG00000008368	ddx56	93	71.293	ENSGAGG00000006789	DDX56	89	72.781	Gopherus_agassizii
ENSCSEG00000008368	ddx56	98	64.568	ENSGGOG00000012031	DDX56	98	64.209	Gorilla_gorilla
ENSCSEG00000008368	ddx56	95	78.464	ENSHBUG00000015246	ddx56	96	78.277	Haplochromis_burtoni
ENSCSEG00000008368	ddx56	99	63.280	ENSHGLG00000017271	DDX56	99	62.923	Heterocephalus_glaber_female
ENSCSEG00000008368	ddx56	99	63.280	ENSHGLG00100015731	DDX56	99	62.923	Heterocephalus_glaber_male
ENSCSEG00000008368	ddx56	100	78.292	ENSHCOG00000001685	ddx56	100	78.292	Hippocampus_comes
ENSCSEG00000008368	ddx56	100	74.823	ENSIPUG00000006602	ddx56	98	75.000	Ictalurus_punctatus
ENSCSEG00000008368	ddx56	99	64.158	ENSSTOG00000000464	DDX56	98	63.978	Ictidomys_tridecemlineatus
ENSCSEG00000008368	ddx56	99	63.978	ENSJJAG00000014269	Ddx56	99	63.620	Jaculus_jaculus
ENSCSEG00000008368	ddx56	99	81.574	ENSKMAG00000016611	ddx56	99	81.753	Kryptolebias_marmoratus
ENSCSEG00000008368	ddx56	99	81.932	ENSLBEG00000026281	ddx56	100	82.469	Labrus_bergylta
ENSCSEG00000008368	ddx56	99	70.324	ENSLACG00000015551	DDX56	97	70.916	Latimeria_chalumnae
ENSCSEG00000008368	ddx56	100	75.666	ENSLOCG00000015185	ddx56	99	75.972	Lepisosteus_oculatus
ENSCSEG00000008368	ddx56	99	64.425	ENSLAFG00000018206	DDX56	99	64.248	Loxodonta_africana
ENSCSEG00000008368	ddx56	98	64.057	ENSMFAG00000041001	DDX56	98	63.849	Macaca_fascicularis
ENSCSEG00000008368	ddx56	98	64.057	ENSMMUG00000002645	DDX56	98	63.849	Macaca_mulatta
ENSCSEG00000008368	ddx56	98	64.057	ENSMNEG00000028492	DDX56	98	63.849	Macaca_nemestrina
ENSCSEG00000008368	ddx56	98	64.568	ENSMLEG00000043591	DDX56	98	64.209	Mandrillus_leucophaeus
ENSCSEG00000008368	ddx56	100	82.353	ENSMAMG00000007776	ddx56	100	82.353	Mastacembelus_armatus
ENSCSEG00000008368	ddx56	100	82.709	ENSMZEG00005009813	ddx56	100	82.531	Maylandia_zebra
ENSCSEG00000008368	ddx56	99	64.695	ENSMICG00000005550	DDX56	98	64.695	Microcebus_murinus
ENSCSEG00000008368	ddx56	99	63.929	ENSMOCG00000016782	Ddx56	98	64.107	Microtus_ochrogaster
ENSCSEG00000008368	ddx56	89	87.052	ENSMMOG00000009654	ddx56	95	87.052	Mola_mola
ENSCSEG00000008368	ddx56	98	58.289	ENSMODG00000016137	DDX56	98	58.348	Monodelphis_domestica
ENSCSEG00000008368	ddx56	67	75.979	ENSMALG00000016910	ddx56	99	75.979	Monopterus_albus
ENSCSEG00000008368	ddx56	99	63.620	MGP_CAROLIEiJ_G0016069	Ddx56	98	68.145	Mus_caroli
ENSCSEG00000008368	ddx56	99	63.262	ENSMUSG00000004393	Ddx56	98	67.742	Mus_musculus
ENSCSEG00000008368	ddx56	99	63.555	MGP_PahariEiJ_G0016822	Ddx56	98	67.339	Mus_pahari
ENSCSEG00000008368	ddx56	99	63.262	MGP_SPRETEiJ_G0016911	Ddx56	98	67.742	Mus_spretus
ENSCSEG00000008368	ddx56	98	63.375	ENSMPUG00000018196	DDX56	86	63.375	Mustela_putorius_furo
ENSCSEG00000008368	ddx56	90	66.471	ENSMLUG00000003509	DDX56	98	63.036	Myotis_lucifugus
ENSCSEG00000008368	ddx56	99	63.830	ENSNGAG00000018785	Ddx56	99	63.523	Nannospalax_galili
ENSCSEG00000008368	ddx56	95	78.090	ENSNBRG00000002656	ddx56	96	78.464	Neolamprologus_brichardi
ENSCSEG00000008368	ddx56	98	64.748	ENSNLEG00000003816	DDX56	98	64.158	Nomascus_leucogenys
ENSCSEG00000008368	ddx56	89	61.078	ENSMEUG00000006788	DDX56	99	61.078	Notamacropus_eugenii
ENSCSEG00000008368	ddx56	98	62.950	ENSOPRG00000000292	-	98	62.590	Ochotona_princeps
ENSCSEG00000008368	ddx56	67	67.196	ENSODEG00000014807	DDX56	99	67.196	Octodon_degus
ENSCSEG00000008368	ddx56	100	78.966	ENSONIG00000011509	ddx56	99	79.501	Oreochromis_niloticus
ENSCSEG00000008368	ddx56	72	56.479	ENSOANG00000015987	-	94	56.479	Ornithorhynchus_anatinus
ENSCSEG00000008368	ddx56	95	56.797	ENSOANG00000006320	-	98	56.611	Ornithorhynchus_anatinus
ENSCSEG00000008368	ddx56	98	63.393	ENSOCUG00000022918	DDX56	98	63.784	Oryctolagus_cuniculus
ENSCSEG00000008368	ddx56	100	80.639	ENSORLG00000001434	ddx56	100	79.929	Oryzias_latipes
ENSCSEG00000008368	ddx56	100	80.639	ENSORLG00020015718	ddx56	97	79.929	Oryzias_latipes_hni
ENSCSEG00000008368	ddx56	99	80.605	ENSORLG00015003004	ddx56	96	79.893	Oryzias_latipes_hsok
ENSCSEG00000008368	ddx56	100	80.319	ENSOMEG00000022072	ddx56	99	80.851	Oryzias_melastigma
ENSCSEG00000008368	ddx56	98	63.538	ENSOGAG00000009981	DDX56	98	64.324	Otolemur_garnettii
ENSCSEG00000008368	ddx56	99	64.184	ENSOARG00000015240	DDX56	98	64.643	Ovis_aries
ENSCSEG00000008368	ddx56	98	61.947	ENSPPAG00000029147	DDX56	98	61.593	Pan_paniscus
ENSCSEG00000008368	ddx56	98	52.783	ENSPPAG00000031263	-	98	52.236	Pan_paniscus
ENSCSEG00000008368	ddx56	98	62.883	ENSPPRG00000014594	DDX56	98	63.423	Panthera_pardus
ENSCSEG00000008368	ddx56	85	60.625	ENSPTIG00000019500	DDX56	90	60.625	Panthera_tigris_altaica
ENSCSEG00000008368	ddx56	93	51.796	ENSPTRG00000052765	-	99	52.731	Pan_troglodytes
ENSCSEG00000008368	ddx56	98	64.568	ENSPTRG00000019147	DDX56	98	64.209	Pan_troglodytes
ENSCSEG00000008368	ddx56	98	64.388	ENSPANG00000002446	DDX56	98	63.669	Papio_anubis
ENSCSEG00000008368	ddx56	99	78.136	ENSPKIG00000018998	ddx56	99	78.136	Paramormyrops_kingsleyae
ENSCSEG00000008368	ddx56	95	82.022	ENSPMGG00000017421	ddx56	99	81.530	Periophthalmus_magnuspinnatus
ENSCSEG00000008368	ddx56	99	66.607	ENSPCIG00000009336	DDX56	98	65.709	Phascolarctos_cinereus
ENSCSEG00000008368	ddx56	100	81.105	ENSPFOG00000018658	ddx56	100	80.749	Poecilia_formosa
ENSCSEG00000008368	ddx56	100	81.283	ENSPLAG00000019208	ddx56	100	80.927	Poecilia_latipinna
ENSCSEG00000008368	ddx56	100	81.283	ENSPMEG00000001775	ddx56	100	80.927	Poecilia_mexicana
ENSCSEG00000008368	ddx56	100	81.462	ENSPREG00000015142	ddx56	100	81.462	Poecilia_reticulata
ENSCSEG00000008368	ddx56	98	64.568	ENSPPYG00000017591	DDX56	98	64.209	Pongo_abelii
ENSCSEG00000008368	ddx56	96	65.257	ENSPCAG00000011499	DDX56	99	64.652	Procavia_capensis
ENSCSEG00000008368	ddx56	98	65.280	ENSPCOG00000024864	DDX56	98	65.099	Propithecus_coquereli
ENSCSEG00000008368	ddx56	79	69.668	ENSPVAG00000000791	DDX56	86	69.668	Pteropus_vampyrus
ENSCSEG00000008368	ddx56	100	82.531	ENSPNYG00000019212	ddx56	100	82.353	Pundamilia_nyererei
ENSCSEG00000008368	ddx56	99	76.471	ENSPNAG00000025446	ddx56	100	76.649	Pygocentrus_nattereri
ENSCSEG00000008368	ddx56	99	63.734	ENSRNOG00000004670	Ddx56	98	63.375	Rattus_norvegicus
ENSCSEG00000008368	ddx56	98	64.209	ENSRBIG00000030140	DDX56	98	64.029	Rhinopithecus_bieti
ENSCSEG00000008368	ddx56	98	64.029	ENSRROG00000044428	DDX56	98	63.849	Rhinopithecus_roxellana
ENSCSEG00000008368	ddx56	96	44.828	YLR276C	-	97	45.000	Saccharomyces_cerevisiae
ENSCSEG00000008368	ddx56	98	64.209	ENSSBOG00000034339	DDX56	98	63.620	Saimiri_boliviensis_boliviensis
ENSCSEG00000008368	ddx56	85	65.010	ENSSHAG00000016615	DDX56	97	64.182	Sarcophilus_harrisii
ENSCSEG00000008368	ddx56	100	76.106	ENSSFOG00015012795	ddx56	100	75.752	Scleropages_formosus
ENSCSEG00000008368	ddx56	100	84.014	ENSSMAG00000011280	ddx56	100	84.397	Scophthalmus_maximus
ENSCSEG00000008368	ddx56	100	85.053	ENSSDUG00000023597	ddx56	100	85.409	Seriola_dumerili
ENSCSEG00000008368	ddx56	100	84.520	ENSSLDG00000018369	ddx56	100	84.875	Seriola_lalandi_dorsalis
ENSCSEG00000008368	ddx56	69	77.586	ENSSARG00000014363	DDX56	77	75.758	Sorex_araneus
ENSCSEG00000008368	ddx56	98	70.251	ENSSPUG00000000784	DDX56	95	70.251	Sphenodon_punctatus
ENSCSEG00000008368	ddx56	95	86.168	ENSSPAG00000009392	ddx56	99	86.355	Stegastes_partitus
ENSCSEG00000008368	ddx56	99	63.636	ENSSSCG00000016745	DDX56	99	63.458	Sus_scrofa
ENSCSEG00000008368	ddx56	100	79.646	ENSTRUG00000018623	ddx56	100	80.177	Takifugu_rubripes
ENSCSEG00000008368	ddx56	99	80.035	ENSTNIG00000013593	ddx56	100	80.600	Tetraodon_nigroviridis
ENSCSEG00000008368	ddx56	99	63.943	ENSTBEG00000007119	DDX56	99	63.766	Tupaia_belangeri
ENSCSEG00000008368	ddx56	77	67.048	ENSTTRG00000010552	DDX56	97	63.312	Tursiops_truncatus
ENSCSEG00000008368	ddx56	98	64.273	ENSUAMG00000014194	DDX56	98	64.273	Ursus_americanus
ENSCSEG00000008368	ddx56	98	64.273	ENSUMAG00000009666	DDX56	98	64.273	Ursus_maritimus
ENSCSEG00000008368	ddx56	98	62.635	ENSVVUG00000011905	DDX56	98	63.423	Vulpes_vulpes
ENSCSEG00000008368	ddx56	98	70.962	ENSXETG00000019000	ddx56	99	71.143	Xenopus_tropicalis
ENSCSEG00000008368	ddx56	100	77.540	ENSXCOG00000017413	ddx56	99	77.540	Xiphophorus_couchianus
ENSCSEG00000008368	ddx56	100	80.749	ENSXMAG00000018749	ddx56	100	80.749	Xiphophorus_maculatus