EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000008448 (Gene tree)
Gene ID: 103388640
Gene Symbol: ubr5
Alias: edd1|wu:fa16c12
Full Name: ubiquitin protein ligase E3 component n-recognin 5
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 28486 bases
Position: chr13:12714467-12742952
Accession: 103388640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013286	PABP	PF00658.18	1.2e-19	1	1
ENSCSEP00000013223	PABP	PF00658.18	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013382	-	10094	XM_008323711	ENSCSEP00000013223	2909 (aa)	XP_008321933	-
ENSCSET00000013445	-	10061	XM_008323715	ENSCSEP00000013286	2898 (aa)	XP_008321937	-

Gene Model

Click here to download ENSCSEG00000008448's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008448	ubr5	98	87.623	ENSG00000104517	UBR5	100	87.759	Homo_sapiens
ENSCSEG00000008448	ubr5	98	96.454	ENSAPOG00000007770	ubr5	100	96.454	Acanthochromis_polyacanthus
ENSCSEG00000008448	ubr5	98	87.071	ENSAMEG00000014808	UBR5	100	86.859	Ailuropoda_melanoleuca
ENSCSEG00000008448	ubr5	89	95.625	ENSACIG00000003786	ubr5	100	96.034	Amphilophus_citrinellus
ENSCSEG00000008448	ubr5	89	95.380	ENSAPEG00000007895	ubr5	100	95.789	Amphiprion_percula
ENSCSEG00000008448	ubr5	89	96.427	ENSATEG00000024796	ubr5	100	96.841	Anabas_testudineus
ENSCSEG00000008448	ubr5	97	87.668	ENSAPLG00000004191	UBR5	100	87.385	Anas_platyrhynchos
ENSCSEG00000008448	ubr5	85	87.870	ENSACAG00000008995	UBR5	100	87.866	Anolis_carolinensis
ENSCSEG00000008448	ubr5	98	87.378	ENSANAG00000032305	UBR5	100	87.342	Aotus_nancymaae
ENSCSEG00000008448	ubr5	98	97.412	ENSACLG00000011122	ubr5	100	97.412	Astatotilapia_calliptera
ENSCSEG00000008448	ubr5	89	92.971	ENSAMXG00000020014	ubr5	100	93.487	Astyanax_mexicanus
ENSCSEG00000008448	ubr5	98	87.259	ENSBTAG00000021209	UBR5	100	87.224	Bos_taurus
ENSCSEG00000008448	ubr5	98	87.439	ENSCJAG00000015960	UBR5	100	87.404	Callithrix_jacchus
ENSCSEG00000008448	ubr5	98	87.364	ENSCAFG00000000619	UBR5	100	88.354	Canis_familiaris
ENSCSEG00000008448	ubr5	98	87.268	ENSCAFG00020000901	UBR5	100	87.022	Canis_lupus_dingo
ENSCSEG00000008448	ubr5	98	87.224	ENSCHIG00000020937	UBR5	100	87.188	Capra_hircus
ENSCSEG00000008448	ubr5	98	87.127	ENSTSYG00000011411	UBR5	99	87.126	Carlito_syrichta
ENSCSEG00000008448	ubr5	97	80.783	ENSCPOG00000009637	UBR5	100	80.764	Cavia_porcellus
ENSCSEG00000008448	ubr5	98	87.439	ENSCCAG00000037120	UBR5	100	87.404	Cebus_capucinus
ENSCSEG00000008448	ubr5	98	87.413	ENSCATG00000035969	UBR5	100	87.377	Cercocebus_atys
ENSCSEG00000008448	ubr5	98	87.088	ENSCLAG00000005604	UBR5	99	87.284	Chinchilla_lanigera
ENSCSEG00000008448	ubr5	98	87.693	ENSCSAG00000011959	UBR5	100	87.658	Chlorocebus_sabaeus
ENSCSEG00000008448	ubr5	85	93.939	ENSCHOG00000013701	UBR5	87	93.939	Choloepus_hoffmanni
ENSCSEG00000008448	ubr5	98	87.399	ENSCPBG00000026166	UBR5	100	87.399	Chrysemys_picta_bellii
ENSCSEG00000008448	ubr5	54	40.736	ENSCING00000008630	-	100	40.667	Ciona_intestinalis
ENSCSEG00000008448	ubr5	97	87.416	ENSCANG00000041171	UBR5	100	87.381	Colobus_angolensis_palliatus
ENSCSEG00000008448	ubr5	98	82.417	ENSCGRG00001002960	Ubr5	100	82.157	Cricetulus_griseus_chok1gshd
ENSCSEG00000008448	ubr5	97	83.720	ENSCGRG00000005867	Ubr5	99	83.850	Cricetulus_griseus_crigri
ENSCSEG00000008448	ubr5	89	94.913	ENSCVAG00000021987	ubr5	100	95.320	Cyprinodon_variegatus
ENSCSEG00000008448	ubr5	98	92.489	ENSDARG00000018192	ubr5	100	92.489	Danio_rerio
ENSCSEG00000008448	ubr5	98	84.911	ENSDNOG00000007897	UBR5	99	84.694	Dasypus_novemcinctus
ENSCSEG00000008448	ubr5	97	87.033	ENSDORG00000007058	Ubr5	99	87.138	Dipodomys_ordii
ENSCSEG00000008448	ubr5	94	52.681	FBgn0002431	hyd	92	52.291	Drosophila_melanogaster
ENSCSEG00000008448	ubr5	75	96.970	ENSETEG00000020339	UBR5	77	96.970	Echinops_telfairi
ENSCSEG00000008448	ubr5	98	87.303	ENSEASG00005001629	UBR5	100	87.338	Equus_asinus_asinus
ENSCSEG00000008448	ubr5	89	87.838	ENSECAG00000015755	UBR5	100	88.370	Equus_caballus
ENSCSEG00000008448	ubr5	89	94.264	ENSELUG00000005362	ubr5	100	94.667	Esox_lucius
ENSCSEG00000008448	ubr5	98	87.329	ENSFCAG00000011214	UBR5	100	87.294	Felis_catus
ENSCSEG00000008448	ubr5	97	87.778	ENSFALG00000005901	UBR5	99	87.779	Ficedula_albicollis
ENSCSEG00000008448	ubr5	97	87.243	ENSFDAG00000014793	UBR5	99	87.207	Fukomys_damarensis
ENSCSEG00000008448	ubr5	89	95.070	ENSFHEG00000019770	ubr5	100	95.478	Fundulus_heteroclitus
ENSCSEG00000008448	ubr5	97	94.259	ENSGMOG00000018440	ubr5	100	94.259	Gadus_morhua
ENSCSEG00000008448	ubr5	98	85.579	ENSGALG00000031282	UBR5	100	85.539	Gallus_gallus
ENSCSEG00000008448	ubr5	97	95.004	ENSGACG00000004642	ubr5	100	95.925	Gasterosteus_aculeatus
ENSCSEG00000008448	ubr5	97	87.179	ENSGGOG00000003058	UBR5	99	87.142	Gorilla_gorilla
ENSCSEG00000008448	ubr5	85	96.697	ENSHBUG00000021803	ubr5	100	96.697	Haplochromis_burtoni
ENSCSEG00000008448	ubr5	98	87.474	ENSHGLG00000010405	UBR5	100	87.439	Heterocephalus_glaber_female
ENSCSEG00000008448	ubr5	97	85.906	ENSHGLG00100004167	UBR5	99	85.760	Heterocephalus_glaber_male
ENSCSEG00000008448	ubr5	89	95.068	ENSHCOG00000014022	ubr5	100	95.476	Hippocampus_comes
ENSCSEG00000008448	ubr5	85	92.170	ENSIPUG00000023090	ubr5	100	92.251	Ictalurus_punctatus
ENSCSEG00000008448	ubr5	97	87.571	ENSSTOG00000005328	UBR5	99	87.535	Ictidomys_tridecemlineatus
ENSCSEG00000008448	ubr5	98	87.264	ENSJJAG00000013619	Ubr5	100	87.124	Jaculus_jaculus
ENSCSEG00000008448	ubr5	98	93.666	ENSKMAG00000001452	ubr5	100	93.666	Kryptolebias_marmoratus
ENSCSEG00000008448	ubr5	98	95.528	ENSLBEG00000024613	ubr5	100	95.528	Labrus_bergylta
ENSCSEG00000008448	ubr5	97	87.619	ENSLACG00000012137	UBR5	99	88.889	Latimeria_chalumnae
ENSCSEG00000008448	ubr5	98	91.404	ENSLOCG00000009882	ubr5	100	91.333	Lepisosteus_oculatus
ENSCSEG00000008448	ubr5	98	87.509	ENSMFAG00000044216	UBR5	100	87.474	Macaca_fascicularis
ENSCSEG00000008448	ubr5	98	87.693	ENSMMUG00000020766	UBR5	100	87.658	Macaca_mulatta
ENSCSEG00000008448	ubr5	98	87.474	ENSMNEG00000028834	UBR5	100	87.439	Macaca_nemestrina
ENSCSEG00000008448	ubr5	98	87.509	ENSMLEG00000039922	UBR5	100	87.474	Mandrillus_leucophaeus
ENSCSEG00000008448	ubr5	89	96.350	ENSMZEG00005025460	ubr5	100	96.763	Maylandia_zebra
ENSCSEG00000008448	ubr5	77	88.104	ENSMGAG00000012296	-	99	88.106	Meleagris_gallopavo
ENSCSEG00000008448	ubr5	98	86.774	ENSMAUG00000018902	Ubr5	100	86.737	Mesocricetus_auratus
ENSCSEG00000008448	ubr5	98	87.303	ENSMICG00000014824	UBR5	100	87.268	Microcebus_murinus
ENSCSEG00000008448	ubr5	98	86.979	ENSMOCG00000019809	Ubr5	100	86.943	Microtus_ochrogaster
ENSCSEG00000008448	ubr5	89	93.748	ENSMMOG00000018266	ubr5	100	94.150	Mola_mola
ENSCSEG00000008448	ubr5	97	87.245	ENSMODG00000005976	UBR5	100	87.244	Monodelphis_domestica
ENSCSEG00000008448	ubr5	89	95.379	ENSMALG00000008018	ubr5	100	95.788	Monopterus_albus
ENSCSEG00000008448	ubr5	98	86.774	MGP_CAROLIEiJ_G0019748	Ubr5	100	86.737	Mus_caroli
ENSCSEG00000008448	ubr5	98	87.027	ENSMUSG00000037487	Ubr5	100	86.990	Mus_musculus
ENSCSEG00000008448	ubr5	98	87.053	MGP_PahariEiJ_G0019757	Ubr5	100	87.016	Mus_pahari
ENSCSEG00000008448	ubr5	98	86.914	MGP_SPRETEiJ_G0020645	Ubr5	100	86.877	Mus_spretus
ENSCSEG00000008448	ubr5	89	88.042	ENSMPUG00000015136	UBR5	100	88.499	Mustela_putorius_furo
ENSCSEG00000008448	ubr5	97	87.139	ENSMLUG00000008052	UBR5	100	86.714	Myotis_lucifugus
ENSCSEG00000008448	ubr5	98	87.439	ENSNGAG00000001915	Ubr5	100	87.404	Nannospalax_galili
ENSCSEG00000008448	ubr5	85	95.972	ENSNBRG00000001982	ubr5	100	95.972	Neolamprologus_brichardi
ENSCSEG00000008448	ubr5	97	87.275	ENSNLEG00000003404	UBR5	100	87.239	Nomascus_leucogenys
ENSCSEG00000008448	ubr5	67	93.249	ENSMEUG00000004964	-	68	88.623	Notamacropus_eugenii
ENSCSEG00000008448	ubr5	81	98.639	ENSOPRG00000004459	UBR5	82	98.639	Ochotona_princeps
ENSCSEG00000008448	ubr5	98	87.439	ENSODEG00000001200	UBR5	100	87.404	Octodon_degus
ENSCSEG00000008448	ubr5	98	97.713	ENSONIG00000016431	ubr5	100	97.713	Oreochromis_niloticus
ENSCSEG00000008448	ubr5	89	88.317	ENSOANG00000013340	-	100	88.815	Ornithorhynchus_anatinus
ENSCSEG00000008448	ubr5	98	86.365	ENSOCUG00000008549	UBR5	99	86.166	Oryctolagus_cuniculus
ENSCSEG00000008448	ubr5	98	96.432	ENSORLG00000003009	ubr5	100	96.432	Oryzias_latipes
ENSCSEG00000008448	ubr5	89	95.303	ENSORLG00020022466	ubr5	100	95.712	Oryzias_latipes_hni
ENSCSEG00000008448	ubr5	98	95.612	ENSORLG00015012347	ubr5	100	95.612	Oryzias_latipes_hsok
ENSCSEG00000008448	ubr5	89	93.675	ENSOMEG00000014794	ubr5	100	93.714	Oryzias_melastigma
ENSCSEG00000008448	ubr5	98	87.299	ENSOGAG00000004491	UBR5	100	87.263	Otolemur_garnettii
ENSCSEG00000008448	ubr5	97	87.288	ENSOARG00000017554	UBR5	98	87.252	Ovis_aries
ENSCSEG00000008448	ubr5	98	86.134	ENSPPAG00000040534	UBR5	100	86.201	Pan_paniscus
ENSCSEG00000008448	ubr5	97	87.420	ENSPPRG00000001290	UBR5	100	87.385	Panthera_pardus
ENSCSEG00000008448	ubr5	98	86.179	ENSPTIG00000016223	UBR5	99	86.140	Panthera_tigris_altaica
ENSCSEG00000008448	ubr5	98	87.404	ENSPTRG00000020482	UBR5	100	87.368	Pan_troglodytes
ENSCSEG00000008448	ubr5	98	87.693	ENSPANG00000017236	UBR5	100	87.658	Papio_anubis
ENSCSEG00000008448	ubr5	98	85.890	ENSPKIG00000016015	UBR5	100	85.609	Paramormyrops_kingsleyae
ENSCSEG00000008448	ubr5	84	88.642	ENSPKIG00000005940	ubr5	99	88.245	Paramormyrops_kingsleyae
ENSCSEG00000008448	ubr5	97	87.364	ENSPSIG00000013244	UBR5	100	88.106	Pelodiscus_sinensis
ENSCSEG00000008448	ubr5	98	91.734	ENSPMGG00000022205	ubr5	100	91.769	Periophthalmus_magnuspinnatus
ENSCSEG00000008448	ubr5	98	86.953	ENSPEMG00000020823	Ubr5	100	87.197	Peromyscus_maniculatus_bairdii
ENSCSEG00000008448	ubr5	89	95.312	ENSPFOG00000012957	ubr5	100	95.720	Poecilia_formosa
ENSCSEG00000008448	ubr5	85	95.024	ENSPLAG00000008530	ubr5	100	95.024	Poecilia_latipinna
ENSCSEG00000008448	ubr5	85	93.679	ENSPMEG00000019322	ubr5	100	93.475	Poecilia_mexicana
ENSCSEG00000008448	ubr5	98	95.255	ENSPREG00000016584	ubr5	100	95.464	Poecilia_reticulata
ENSCSEG00000008448	ubr5	95	88.629	ENSPPYG00000018797	UBR5	96	89.805	Pongo_abelii
ENSCSEG00000008448	ubr5	76	93.925	ENSPCAG00000001160	UBR5	78	93.548	Procavia_capensis
ENSCSEG00000008448	ubr5	98	86.259	ENSPCOG00000014399	UBR5	100	86.220	Propithecus_coquereli
ENSCSEG00000008448	ubr5	88	98.639	ENSPVAG00000012646	UBR5	90	98.639	Pteropus_vampyrus
ENSCSEG00000008448	ubr5	85	96.421	ENSPNYG00000004164	ubr5	100	96.421	Pundamilia_nyererei
ENSCSEG00000008448	ubr5	89	91.728	ENSPNAG00000001318	ubr5	100	92.200	Pygocentrus_nattereri
ENSCSEG00000008448	ubr5	85	86.103	ENSRNOG00000006816	Ubr5	100	86.180	Rattus_norvegicus
ENSCSEG00000008448	ubr5	97	84.499	ENSRBIG00000038821	UBR5	100	85.586	Rhinopithecus_bieti
ENSCSEG00000008448	ubr5	98	86.153	ENSRROG00000040919	UBR5	100	86.114	Rhinopithecus_roxellana
ENSCSEG00000008448	ubr5	98	87.439	ENSSBOG00000025123	UBR5	100	87.404	Saimiri_boliviensis_boliviensis
ENSCSEG00000008448	ubr5	98	87.417	ENSSHAG00000017701	UBR5	100	87.242	Sarcophilus_harrisii
ENSCSEG00000008448	ubr5	89	90.291	ENSSFOG00015003412	ubr5	100	90.601	Scleropages_formosus
ENSCSEG00000008448	ubr5	89	94.876	ENSSMAG00000010194	ubr5	100	95.283	Scophthalmus_maximus
ENSCSEG00000008448	ubr5	89	96.505	ENSSDUG00000008072	ubr5	100	96.919	Seriola_dumerili
ENSCSEG00000008448	ubr5	98	98.276	ENSSLDG00000013014	ubr5	100	98.276	Seriola_lalandi_dorsalis
ENSCSEG00000008448	ubr5	89	95.455	ENSSARG00000000171	UBR5	91	95.455	Sorex_araneus
ENSCSEG00000008448	ubr5	89	95.587	ENSSPAG00000015131	ubr5	100	95.995	Stegastes_partitus
ENSCSEG00000008448	ubr5	98	87.513	ENSSSCG00000022479	UBR5	100	88.499	Sus_scrofa
ENSCSEG00000008448	ubr5	97	87.469	ENSTGUG00000012099	UBR5	100	87.469	Taeniopygia_guttata
ENSCSEG00000008448	ubr5	89	96.427	ENSTRUG00000010399	ubr5	100	96.427	Takifugu_rubripes
ENSCSEG00000008448	ubr5	97	90.507	ENSTNIG00000013292	ubr5	100	90.329	Tetraodon_nigroviridis
ENSCSEG00000008448	ubr5	87	100.000	ENSTBEG00000015656	UBR5	89	100.000	Tupaia_belangeri
ENSCSEG00000008448	ubr5	78	92.857	ENSTTRG00000000492	UBR5	80	92.857	Tursiops_truncatus
ENSCSEG00000008448	ubr5	96	86.991	ENSUMAG00000017960	UBR5	100	86.883	Ursus_maritimus
ENSCSEG00000008448	ubr5	89	85.521	ENSVPAG00000008376	UBR5	94	85.601	Vicugna_pacos
ENSCSEG00000008448	ubr5	96	87.322	ENSVVUG00000013461	UBR5	100	87.071	Vulpes_vulpes
ENSCSEG00000008448	ubr5	98	86.190	ENSXETG00000031995	UBR5	100	85.910	Xenopus_tropicalis
ENSCSEG00000008448	ubr5	74	100.000	ENSXCOG00000017034	ubr5	99	91.926	Xiphophorus_couchianus
ENSCSEG00000008448	ubr5	85	94.984	ENSXMAG00000002429	ubr5	100	94.984	Xiphophorus_maculatus