EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008522 (Gene tree)
Gene ID: 103392401
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3841 bases
Position: chr2:266216-270056
Accession: 103392401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013207	MMR_HSR1	PF01926.23	9.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013366	-	1899	XM_008329013	ENSCSEP00000013207	632 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000008522's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008522	lsg1	54	34.262	ENSCSEG00000019714	gnl1	52	35.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008522	lsg1	99	63.213	ENSG00000041802	LSG1	90	77.778	Homo_sapiens
ENSCSEG00000008522	lsg1	100	77.605	ENSAPOG00000009694	lsg1	99	77.778	Acanthochromis_polyacanthus
ENSCSEG00000008522	lsg1	99	62.219	ENSAMEG00000009343	LSG1	98	63.400	Ailuropoda_melanoleuca
ENSCSEG00000008522	lsg1	98	79.393	ENSACIG00000012406	lsg1	98	79.712	Amphilophus_citrinellus
ENSCSEG00000008522	lsg1	100	78.261	ENSAOCG00000016066	lsg1	99	78.447	Amphiprion_ocellaris
ENSCSEG00000008522	lsg1	100	77.950	ENSAPEG00000003252	lsg1	99	78.130	Amphiprion_percula
ENSCSEG00000008522	lsg1	98	79.403	ENSATEG00000011794	lsg1	98	79.403	Anabas_testudineus
ENSCSEG00000008522	lsg1	95	60.781	ENSACAG00000004222	LSG1	100	60.781	Anolis_carolinensis
ENSCSEG00000008522	lsg1	99	64.253	ENSANAG00000021153	LSG1	98	65.231	Aotus_nancymaae
ENSCSEG00000008522	lsg1	100	78.604	ENSACLG00000000520	lsg1	98	78.793	Astatotilapia_calliptera
ENSCSEG00000008522	lsg1	100	71.822	ENSAMXG00000008271	lsg1	98	73.618	Astyanax_mexicanus
ENSCSEG00000008522	lsg1	99	62.500	ENSBTAG00000008461	LSG1	98	64.142	Bos_taurus
ENSCSEG00000008522	lsg1	73	48.430	WBGene00016907	C53H9.2	88	50.769	Caenorhabditis_elegans
ENSCSEG00000008522	lsg1	99	64.222	ENSCJAG00000013962	LSG1	98	65.191	Callithrix_jacchus
ENSCSEG00000008522	lsg1	95	64.465	ENSCAFG00000013445	LSG1	100	64.364	Canis_familiaris
ENSCSEG00000008522	lsg1	99	63.459	ENSCAFG00020002216	LSG1	99	64.377	Canis_lupus_dingo
ENSCSEG00000008522	lsg1	100	62.946	ENSCHIG00000015769	LSG1	98	64.798	Capra_hircus
ENSCSEG00000008522	lsg1	99	63.198	ENSTSYG00000001447	LSG1	98	63.846	Carlito_syrichta
ENSCSEG00000008522	lsg1	94	62.903	ENSCAPG00000009856	LSG1	99	64.542	Cavia_aperea
ENSCSEG00000008522	lsg1	99	63.650	ENSCCAG00000035744	LSG1	98	64.615	Cebus_capucinus
ENSCSEG00000008522	lsg1	99	63.952	ENSCATG00000042060	LSG1	98	63.538	Cercocebus_atys
ENSCSEG00000008522	lsg1	99	63.514	ENSCSAG00000008796	LSG1	90	64.769	Chlorocebus_sabaeus
ENSCSEG00000008522	lsg1	100	63.824	ENSCPBG00000015941	LSG1	82	64.902	Chrysemys_picta_bellii
ENSCSEG00000008522	lsg1	84	47.566	ENSCING00000007079	-	94	48.898	Ciona_intestinalis
ENSCSEG00000008522	lsg1	85	48.250	ENSCSAVG00000002514	-	95	49.606	Ciona_savignyi
ENSCSEG00000008522	lsg1	99	63.063	ENSCANG00000030709	LSG1	98	63.859	Colobus_angolensis_palliatus
ENSCSEG00000008522	lsg1	99	63.790	ENSCGRG00001019846	Lsg1	98	64.465	Cricetulus_griseus_chok1gshd
ENSCSEG00000008522	lsg1	99	63.278	ENSCGRG00000014617	Lsg1	98	64.087	Cricetulus_griseus_crigri
ENSCSEG00000008522	lsg1	97	77.352	ENSCVAG00000002484	lsg1	98	77.778	Cyprinodon_variegatus
ENSCSEG00000008522	lsg1	100	74.343	ENSDARG00000015352	lsg1	98	74.724	Danio_rerio
ENSCSEG00000008522	lsg1	99	62.481	ENSDNOG00000006224	LSG1	98	62.963	Dasypus_novemcinctus
ENSCSEG00000008522	lsg1	99	49.528	FBgn0266284	Ns3	98	49.357	Drosophila_melanogaster
ENSCSEG00000008522	lsg1	88	71.053	ENSETEG00000003888	LSG1	87	76.190	Echinops_telfairi
ENSCSEG00000008522	lsg1	88	54.822	ENSEBUG00000003119	lsg1	85	55.143	Eptatretus_burgeri
ENSCSEG00000008522	lsg1	99	62.930	ENSEASG00005000678	LSG1	98	63.846	Equus_asinus_asinus
ENSCSEG00000008522	lsg1	99	62.930	ENSECAG00000017659	LSG1	98	63.846	Equus_caballus
ENSCSEG00000008522	lsg1	86	59.829	ENSEEUG00000015217	LSG1	75	59.829	Erinaceus_europaeus
ENSCSEG00000008522	lsg1	100	71.186	ENSELUG00000023973	lsg1	98	72.057	Esox_lucius
ENSCSEG00000008522	lsg1	100	63.118	ENSFCAG00000024957	LSG1	98	63.761	Felis_catus
ENSCSEG00000008522	lsg1	92	60.759	ENSFALG00000007210	LSG1	94	61.709	Ficedula_albicollis
ENSCSEG00000008522	lsg1	99	61.725	ENSFDAG00000017373	LSG1	98	62.346	Fukomys_damarensis
ENSCSEG00000008522	lsg1	97	78.150	ENSFHEG00000003680	lsg1	98	78.254	Fundulus_heteroclitus
ENSCSEG00000008522	lsg1	90	75.465	ENSGMOG00000015834	lsg1	98	67.442	Gadus_morhua
ENSCSEG00000008522	lsg1	99	59.581	ENSGALG00000007058	LSG1	86	61.077	Gallus_gallus
ENSCSEG00000008522	lsg1	97	76.911	ENSGAFG00000015831	lsg1	98	77.021	Gambusia_affinis
ENSCSEG00000008522	lsg1	98	76.287	ENSGACG00000009323	lsg1	98	76.287	Gasterosteus_aculeatus
ENSCSEG00000008522	lsg1	99	63.444	ENSGGOG00000000520	LSG1	98	64.407	Gorilla_gorilla
ENSCSEG00000008522	lsg1	100	77.845	ENSHBUG00000005659	lsg1	98	78.019	Haplochromis_burtoni
ENSCSEG00000008522	lsg1	99	63.537	ENSHGLG00000017390	LSG1	98	63.679	Heterocephalus_glaber_female
ENSCSEG00000008522	lsg1	99	63.537	ENSHGLG00100018587	LSG1	98	63.679	Heterocephalus_glaber_male
ENSCSEG00000008522	lsg1	97	76.730	ENSHCOG00000016848	lsg1	98	76.682	Hippocampus_comes
ENSCSEG00000008522	lsg1	100	73.011	ENSIPUG00000008631	lsg1	98	73.059	Ictalurus_punctatus
ENSCSEG00000008522	lsg1	75	57.058	ENSSTOG00000010234	LSG1	92	57.367	Ictidomys_tridecemlineatus
ENSCSEG00000008522	lsg1	99	65.474	ENSJJAG00000015513	Lsg1	98	66.035	Jaculus_jaculus
ENSCSEG00000008522	lsg1	98	76.800	ENSKMAG00000009681	lsg1	98	76.800	Kryptolebias_marmoratus
ENSCSEG00000008522	lsg1	98	76.000	ENSLBEG00000024261	lsg1	98	76.480	Labrus_bergylta
ENSCSEG00000008522	lsg1	100	65.579	ENSLACG00000013399	LSG1	98	65.809	Latimeria_chalumnae
ENSCSEG00000008522	lsg1	98	68.168	ENSLOCG00000004918	lsg1	98	68.634	Lepisosteus_oculatus
ENSCSEG00000008522	lsg1	99	63.775	ENSLAFG00000012919	-	98	64.441	Loxodonta_africana
ENSCSEG00000008522	lsg1	99	63.801	ENSMFAG00000039903	LSG1	98	63.385	Macaca_fascicularis
ENSCSEG00000008522	lsg1	99	63.801	ENSMMUG00000010708	LSG1	98	64.769	Macaca_mulatta
ENSCSEG00000008522	lsg1	99	63.801	ENSMNEG00000031538	LSG1	98	63.385	Macaca_nemestrina
ENSCSEG00000008522	lsg1	99	63.801	ENSMLEG00000041184	LSG1	98	64.769	Mandrillus_leucophaeus
ENSCSEG00000008522	lsg1	100	77.864	ENSMAMG00000000470	lsg1	98	78.041	Mastacembelus_armatus
ENSCSEG00000008522	lsg1	100	77.845	ENSMZEG00005017865	lsg1	98	78.019	Maylandia_zebra
ENSCSEG00000008522	lsg1	88	61.149	ENSMGAG00000007050	LSG1	99	62.017	Meleagris_gallopavo
ENSCSEG00000008522	lsg1	91	60.656	ENSMAUG00000016976	Lsg1	90	63.465	Mesocricetus_auratus
ENSCSEG00000008522	lsg1	99	62.689	ENSMICG00000049087	LSG1	98	63.328	Microcebus_murinus
ENSCSEG00000008522	lsg1	99	62.727	ENSMOCG00000022136	Lsg1	98	64.451	Microtus_ochrogaster
ENSCSEG00000008522	lsg1	86	86.364	ENSMMOG00000008884	lsg1	98	75.040	Mola_mola
ENSCSEG00000008522	lsg1	99	54.338	ENSMODG00000019828	LSG1	98	54.462	Monodelphis_domestica
ENSCSEG00000008522	lsg1	100	63.134	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.308	Mus_caroli
ENSCSEG00000008522	lsg1	100	64.209	ENSMUSG00000022538	Lsg1	98	64.577	Mus_musculus
ENSCSEG00000008522	lsg1	98	63.411	MGP_PahariEiJ_G0016352	Lsg1	98	64.330	Mus_pahari
ENSCSEG00000008522	lsg1	100	63.594	MGP_SPRETEiJ_G0021544	Lsg1	98	65.252	Mus_spretus
ENSCSEG00000008522	lsg1	100	62.780	ENSMPUG00000003734	LSG1	98	64.264	Mustela_putorius_furo
ENSCSEG00000008522	lsg1	100	63.222	ENSMLUG00000012548	LSG1	98	63.876	Myotis_lucifugus
ENSCSEG00000008522	lsg1	99	62.232	ENSNGAG00000021872	Lsg1	98	63.158	Nannospalax_galili
ENSCSEG00000008522	lsg1	99	64.103	ENSNLEG00000008293	LSG1	98	65.077	Nomascus_leucogenys
ENSCSEG00000008522	lsg1	69	70.103	ENSMEUG00000009041	-	85	70.103	Notamacropus_eugenii
ENSCSEG00000008522	lsg1	100	78.669	ENSONIG00000002635	lsg1	98	78.858	Oreochromis_niloticus
ENSCSEG00000008522	lsg1	95	66.186	ENSOANG00000012742	LSG1	99	66.186	Ornithorhynchus_anatinus
ENSCSEG00000008522	lsg1	99	62.018	ENSOCUG00000004817	LSG1	98	63.720	Oryctolagus_cuniculus
ENSCSEG00000008522	lsg1	98	76.282	ENSORLG00000007695	lsg1	98	76.603	Oryzias_latipes
ENSCSEG00000008522	lsg1	98	76.122	ENSORLG00020016286	lsg1	98	76.442	Oryzias_latipes_hni
ENSCSEG00000008522	lsg1	98	75.962	ENSORLG00015012025	lsg1	98	75.962	Oryzias_latipes_hsok
ENSCSEG00000008522	lsg1	98	76.527	ENSOMEG00000022379	lsg1	98	76.527	Oryzias_melastigma
ENSCSEG00000008522	lsg1	99	63.253	ENSOGAG00000003475	LSG1	98	63.441	Otolemur_garnettii
ENSCSEG00000008522	lsg1	100	61.799	ENSOARG00000020403	LSG1	98	62.766	Ovis_aries
ENSCSEG00000008522	lsg1	99	63.746	ENSPPAG00000029271	LSG1	98	64.253	Pan_paniscus
ENSCSEG00000008522	lsg1	100	63.284	ENSPPRG00000010281	LSG1	98	63.927	Panthera_pardus
ENSCSEG00000008522	lsg1	100	63.118	ENSPTIG00000010789	LSG1	98	63.761	Panthera_tigris_altaica
ENSCSEG00000008522	lsg1	99	63.897	ENSPTRG00000015760	LSG1	98	64.407	Pan_troglodytes
ENSCSEG00000008522	lsg1	99	63.801	ENSPANG00000018249	LSG1	98	63.385	Papio_anubis
ENSCSEG00000008522	lsg1	99	71.763	ENSPKIG00000002895	lsg1	98	71.930	Paramormyrops_kingsleyae
ENSCSEG00000008522	lsg1	96	61.371	ENSPSIG00000009821	LSG1	99	61.371	Pelodiscus_sinensis
ENSCSEG00000008522	lsg1	95	75.407	ENSPMGG00000000931	lsg1	100	75.407	Periophthalmus_magnuspinnatus
ENSCSEG00000008522	lsg1	99	62.857	ENSPEMG00000012082	-	98	63.497	Peromyscus_maniculatus_bairdii
ENSCSEG00000008522	lsg1	99	60.000	ENSPMAG00000007451	lsg1	98	59.970	Petromyzon_marinus
ENSCSEG00000008522	lsg1	97	65.405	ENSPCIG00000013890	LSG1	79	65.405	Phascolarctos_cinereus
ENSCSEG00000008522	lsg1	97	76.213	ENSPFOG00000021882	lsg1	98	76.636	Poecilia_formosa
ENSCSEG00000008522	lsg1	97	76.056	ENSPLAG00000019536	lsg1	98	76.168	Poecilia_latipinna
ENSCSEG00000008522	lsg1	97	75.469	ENSPMEG00000017281	lsg1	98	75.776	Poecilia_mexicana
ENSCSEG00000008522	lsg1	97	65.948	ENSPREG00000006048	lsg1	98	66.258	Poecilia_reticulata
ENSCSEG00000008522	lsg1	92	62.890	ENSPPYG00000014425	LSG1	98	63.423	Pongo_abelii
ENSCSEG00000008522	lsg1	84	71.053	ENSPCAG00000005511	LSG1	80	74.603	Procavia_capensis
ENSCSEG00000008522	lsg1	99	61.991	ENSPCOG00000012360	LSG1	98	62.615	Propithecus_coquereli
ENSCSEG00000008522	lsg1	100	78.604	ENSPNYG00000021994	lsg1	98	78.793	Pundamilia_nyererei
ENSCSEG00000008522	lsg1	100	71.957	ENSPNAG00000015533	lsg1	98	72.170	Pygocentrus_nattereri
ENSCSEG00000008522	lsg1	99	63.086	ENSRBIG00000029053	LSG1	98	64.043	Rhinopithecus_bieti
ENSCSEG00000008522	lsg1	99	63.086	ENSRROG00000037702	LSG1	98	64.043	Rhinopithecus_roxellana
ENSCSEG00000008522	lsg1	85	40.325	YGL099W	LSG1	72	42.330	Saccharomyces_cerevisiae
ENSCSEG00000008522	lsg1	99	64.371	ENSSBOG00000034938	LSG1	98	65.344	Saimiri_boliviensis_boliviensis
ENSCSEG00000008522	lsg1	77	61.394	ENSSHAG00000003487	LSG1	100	62.524	Sarcophilus_harrisii
ENSCSEG00000008522	lsg1	98	72.178	ENSSFOG00015008955	lsg1	98	71.340	Scleropages_formosus
ENSCSEG00000008522	lsg1	98	80.093	ENSSDUG00000004622	lsg1	98	80.093	Seriola_dumerili
ENSCSEG00000008522	lsg1	98	81.440	ENSSLDG00000010869	lsg1	98	81.440	Seriola_lalandi_dorsalis
ENSCSEG00000008522	lsg1	83	65.294	ENSSARG00000012981	LSG1	72	71.304	Sorex_araneus
ENSCSEG00000008522	lsg1	100	63.338	ENSSPUG00000016347	LSG1	98	63.166	Sphenodon_punctatus
ENSCSEG00000008522	lsg1	100	76.176	ENSSPAG00000005508	lsg1	99	77.600	Stegastes_partitus
ENSCSEG00000008522	lsg1	100	62.349	ENSSSCG00000011827	LSG1	98	63.183	Sus_scrofa
ENSCSEG00000008522	lsg1	88	59.641	ENSTGUG00000009068	LSG1	100	59.774	Taeniopygia_guttata
ENSCSEG00000008522	lsg1	97	72.452	ENSTRUG00000017380	lsg1	98	72.583	Takifugu_rubripes
ENSCSEG00000008522	lsg1	97	74.686	ENSTNIG00000015570	lsg1	98	75.625	Tetraodon_nigroviridis
ENSCSEG00000008522	lsg1	100	59.070	ENSTTRG00000000559	LSG1	98	59.633	Tursiops_truncatus
ENSCSEG00000008522	lsg1	100	62.801	ENSUAMG00000012454	LSG1	98	63.287	Ursus_americanus
ENSCSEG00000008522	lsg1	100	62.801	ENSUMAG00000000855	LSG1	98	63.287	Ursus_maritimus
ENSCSEG00000008522	lsg1	95	60.413	ENSVPAG00000012400	LSG1	100	60.413	Vicugna_pacos
ENSCSEG00000008522	lsg1	95	63.608	ENSVVUG00000008956	LSG1	97	63.867	Vulpes_vulpes
ENSCSEG00000008522	lsg1	100	65.706	ENSXETG00000003451	lsg1	98	66.351	Xenopus_tropicalis
ENSCSEG00000008522	lsg1	97	76.378	ENSXCOG00000003239	lsg1	98	76.646	Xiphophorus_couchianus
ENSCSEG00000008522	lsg1	97	76.000	ENSXMAG00000005536	lsg1	98	76.115	Xiphophorus_maculatus