EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008528 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3443 bases
Position: chr16:8610271-8613713
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013198	zf-C2H2	PF00096.26	7e-30	1	5
ENSCSEP00000013198	zf-C2H2	PF00096.26	7e-30	2	5
ENSCSEP00000013198	zf-C2H2	PF00096.26	7e-30	3	5
ENSCSEP00000013198	zf-C2H2	PF00096.26	7e-30	4	5
ENSCSEP00000013198	zf-C2H2	PF00096.26	7e-30	5	5
ENSCSEP00000013198	zf-met	PF12874.7	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013357	-	2115	-	ENSCSEP00000013198	455 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000008528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008528	-	73	45.055	ENSCSEG00000001748	-	97	44.920
ENSCSEG00000008528	-	73	56.489	ENSCSEG00000019047	-	97	58.537
ENSCSEG00000008528	-	99	53.947	ENSCSEG00000008525	-	96	53.947
ENSCSEG00000008528	-	54	41.935	ENSCSEG00000005935	ZNF319	97	43.023
ENSCSEG00000008528	-	58	52.941	ENSCSEG00000011586	znf236	61	52.941
ENSCSEG00000008528	-	62	48.555	ENSCSEG00000004210	-	96	50.311
ENSCSEG00000008528	-	57	41.071	ENSCSEG00000005491	-	84	41.071
ENSCSEG00000008528	-	92	55.102	ENSCSEG00000010423	-	99	51.648
ENSCSEG00000008528	-	68	53.763	ENSCSEG00000003757	-	99	54.070
ENSCSEG00000008528	-	86	52.486	ENSCSEG00000008502	-	96	52.486
ENSCSEG00000008528	-	73	54.335	ENSCSEG00000013398	-	94	54.335
ENSCSEG00000008528	-	71	53.333	ENSCSEG00000010453	-	91	53.333
ENSCSEG00000008528	-	74	48.630	ENSCSEG00000004273	-	97	48.630
ENSCSEG00000008528	-	91	39.198	ENSCSEG00000013737	-	51	39.198
ENSCSEG00000008528	-	83	53.333	ENSCSEG00000008533	-	68	53.333
ENSCSEG00000008528	-	99	46.939	ENSCSEG00000008539	-	97	47.929
ENSCSEG00000008528	-	100	55.135	ENSCSEG00000008510	-	100	55.135
ENSCSEG00000008528	-	64	46.154	ENSCSEG00000004265	-	75	46.154
ENSCSEG00000008528	-	72	43.511	ENSCSEG00000019182	-	65	43.511
ENSCSEG00000008528	-	73	50.000	ENSCSEG00000020730	-	97	50.000
ENSCSEG00000008528	-	70	45.810	ENSCSEG00000001771	-	74	45.810
ENSCSEG00000008528	-	66	50.262	ENSCSEG00000020696	-	98	56.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008528	-	67	50.400	ENSAPOG00000019138	-	80	50.400	Acanthochromis_polyacanthus
ENSCSEG00000008528	-	54	44.068	ENSACIG00000006826	-	60	44.068	Amphilophus_citrinellus
ENSCSEG00000008528	-	66	52.482	ENSACIG00000007464	-	74	46.552	Amphilophus_citrinellus
ENSCSEG00000008528	-	70	48.905	ENSAOCG00000016897	-	86	48.905	Amphiprion_ocellaris
ENSCSEG00000008528	-	70	48.905	ENSAPEG00000001556	-	86	48.905	Amphiprion_percula
ENSCSEG00000008528	-	92	45.902	ENSAPEG00000018762	-	86	45.902	Amphiprion_percula
ENSCSEG00000008528	-	74	49.635	ENSCVAG00000006484	-	76	49.635	Cyprinodon_variegatus
ENSCSEG00000008528	-	56	40.824	ENSCVAG00000006653	-	86	40.824	Cyprinodon_variegatus
ENSCSEG00000008528	-	70	43.243	ENSFHEG00000023184	-	79	45.333	Fundulus_heteroclitus
ENSCSEG00000008528	-	69	30.476	ENSGAFG00000012545	-	80	30.476	Gambusia_affinis
ENSCSEG00000008528	-	68	42.308	ENSGAFG00000011998	-	65	42.308	Gambusia_affinis
ENSCSEG00000008528	-	87	42.424	ENSHCOG00000013489	-	88	49.425	Hippocampus_comes
ENSCSEG00000008528	-	68	50.299	ENSHCOG00000008213	-	72	50.299	Hippocampus_comes
ENSCSEG00000008528	-	62	43.103	ENSIPUG00000013083	-	62	43.103	Ictalurus_punctatus
ENSCSEG00000008528	-	71	40.217	ENSKMAG00000021873	-	75	36.207	Kryptolebias_marmoratus
ENSCSEG00000008528	-	54	44.706	ENSLBEG00000007106	-	74	44.706	Labrus_bergylta
ENSCSEG00000008528	-	67	43.836	ENSLBEG00000011210	-	71	43.836	Labrus_bergylta
ENSCSEG00000008528	-	71	47.015	ENSMAMG00000017939	-	91	47.015	Mastacembelus_armatus
ENSCSEG00000008528	-	72	55.556	ENSMMOG00000017592	-	72	58.427	Mola_mola
ENSCSEG00000008528	-	57	41.096	ENSOMEG00000005578	-	63	41.096	Oryzias_melastigma
ENSCSEG00000008528	-	57	52.941	ENSPMGG00000002659	-	85	50.476	Periophthalmus_magnuspinnatus
ENSCSEG00000008528	-	50	46.309	ENSPMGG00000007051	-	55	38.922	Periophthalmus_magnuspinnatus
ENSCSEG00000008528	-	78	32.687	ENSPFOG00000009491	-	85	32.687	Poecilia_formosa
ENSCSEG00000008528	-	73	49.133	ENSPLAG00000010067	-	91	49.133	Poecilia_latipinna
ENSCSEG00000008528	-	78	32.687	ENSPMEG00000024117	-	85	32.687	Poecilia_mexicana
ENSCSEG00000008528	-	59	50.467	ENSPNYG00000017888	-	61	50.467	Pundamilia_nyererei
ENSCSEG00000008528	-	63	53.165	ENSSMAG00000004259	-	85	53.165	Scophthalmus_maximus
ENSCSEG00000008528	-	72	52.326	ENSSDUG00000020774	-	83	52.326	Seriola_dumerili
ENSCSEG00000008528	-	56	44.737	ENSSDUG00000000905	-	71	43.590	Seriola_dumerili
ENSCSEG00000008528	-	70	49.367	ENSSPAG00000005770	-	76	49.367	Stegastes_partitus
ENSCSEG00000008528	-	87	40.506	ENSXCOG00000014360	-	95	40.506	Xiphophorus_couchianus
ENSCSEG00000008528	-	89	40.678	ENSXCOG00000003441	-	90	42.478	Xiphophorus_couchianus