EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000008530 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10189 bases
Position: chr8:3259306-3269494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013273	PAM2	PF07145.15	1.1e-05	1	1
ENSCSEP00000013252	PAM2	PF07145.15	1.1e-05	1	1
ENSCSEP00000013201	PAM2	PF07145.15	2.8e-05	1	1
ENSCSEP00000013215	PAM2	PF07145.15	2.8e-05	1	1
ENSCSEP00000013235	PAM2	PF07145.15	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013360	-	4897	-	ENSCSEP00000013201	653 (aa)	-	-
ENSCSET00000013432	-	4823	-	ENSCSEP00000013273	599 (aa)	-	-
ENSCSET00000013374	-	4897	-	ENSCSEP00000013215	653 (aa)	-	-
ENSCSET00000013395	-	4897	-	ENSCSEP00000013235	653 (aa)	-	-
ENSCSET00000013410	-	4860	-	ENSCSEP00000013252	623 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000008530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008530	-	96	37.059	ENSG00000168488	ATXN2L	99	40.310	Homo_sapiens
ENSCSEG00000008530	-	96	84.080	ENSAPOG00000021412	-	57	82.753	Acanthochromis_polyacanthus
ENSCSEG00000008530	-	87	46.486	ENSACIG00000024435	atxn2l	55	54.762	Amphilophus_citrinellus
ENSCSEG00000008530	-	96	83.056	ENSAOCG00000002581	-	65	84.411	Amphiprion_ocellaris
ENSCSEG00000008530	-	96	82.890	ENSAPEG00000011038	-	58	84.245	Amphiprion_percula
ENSCSEG00000008530	-	96	84.185	ENSATEG00000019382	-	57	83.361	Anabas_testudineus
ENSCSEG00000008530	-	96	82.149	ENSACLG00000009975	-	58	79.645	Astatotilapia_calliptera
ENSCSEG00000008530	-	99	53.435	ENSAMXG00000003332	atxn2l	69	53.991	Astyanax_mexicanus
ENSCSEG00000008530	-	96	77.944	ENSCVAG00000015825	-	58	77.280	Cyprinodon_variegatus
ENSCSEG00000008530	-	98	54.488	ENSDARG00000011597	atxn2l	60	54.003	Danio_rerio
ENSCSEG00000008530	-	58	61.798	ENSGMOG00000000316	atxn2l	54	52.459	Gadus_morhua
ENSCSEG00000008530	-	96	78.441	ENSGACG00000007446	-	59	78.441	Gasterosteus_aculeatus
ENSCSEG00000008530	-	96	81.818	ENSHBUG00000007997	-	58	80.496	Haplochromis_burtoni
ENSCSEG00000008530	-	96	83.721	ENSKMAG00000021450	-	60	80.897	Kryptolebias_marmoratus
ENSCSEG00000008530	-	96	82.587	ENSLBEG00000022720	-	57	81.095	Labrus_bergylta
ENSCSEG00000008530	-	96	80.066	ENSMAMG00000013005	-	57	79.568	Mastacembelus_armatus
ENSCSEG00000008530	-	96	82.149	ENSMZEG00005013869	-	58	79.645	Maylandia_zebra
ENSCSEG00000008530	-	96	48.649	ENSONIG00000009388	atxn2l	67	45.205	Oreochromis_niloticus
ENSCSEG00000008530	-	96	82.314	ENSONIG00000011478	-	60	79.321	Oreochromis_niloticus
ENSCSEG00000008530	-	98	77.886	ENSORLG00000006059	-	58	76.585	Oryzias_latipes
ENSCSEG00000008530	-	98	77.398	ENSORLG00020000991	-	58	76.260	Oryzias_latipes_hni
ENSCSEG00000008530	-	98	77.398	ENSORLG00015014174	-	58	76.260	Oryzias_latipes_hsok
ENSCSEG00000008530	-	98	77.724	ENSOMEG00000021118	-	58	76.748	Oryzias_melastigma
ENSCSEG00000008530	-	96	58.464	ENSPKIG00000018462	-	59	59.259	Paramormyrops_kingsleyae
ENSCSEG00000008530	-	96	77.409	ENSPFOG00000005935	-	58	75.748	Poecilia_formosa
ENSCSEG00000008530	-	96	77.907	ENSPLAG00000017094	-	59	76.246	Poecilia_latipinna
ENSCSEG00000008530	-	96	77.243	ENSPMEG00000017227	-	59	75.581	Poecilia_mexicana
ENSCSEG00000008530	-	96	78.405	ENSPREG00000023090	-	58	76.744	Poecilia_reticulata
ENSCSEG00000008530	-	96	82.149	ENSPNYG00000017058	-	58	79.645	Pundamilia_nyererei
ENSCSEG00000008530	-	96	58.898	ENSPNAG00000014538	atxn2l	61	60.159	Pygocentrus_nattereri
ENSCSEG00000008530	-	96	55.627	ENSSFOG00015001018	atxn2l	59	53.722	Scleropages_formosus
ENSCSEG00000008530	-	96	86.070	ENSSMAG00000016932	-	57	83.914	Scophthalmus_maximus
ENSCSEG00000008530	-	96	87.562	ENSSDUG00000023014	-	58	85.406	Seriola_dumerili
ENSCSEG00000008530	-	77	90.114	ENSSLDG00000017701	-	54	90.421	Seriola_lalandi_dorsalis
ENSCSEG00000008530	-	96	81.924	ENSSPAG00000008174	-	57	82.947	Stegastes_partitus
ENSCSEG00000008530	-	96	80.763	ENSTRUG00000007132	-	57	79.270	Takifugu_rubripes
ENSCSEG00000008530	-	96	79.373	ENSTNIG00000018942	-	60	77.558	Tetraodon_nigroviridis
ENSCSEG00000008530	-	96	77.243	ENSXMAG00000010133	-	58	75.415	Xiphophorus_maculatus