EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008533 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3714 bases
Position: chr16:8614897-8618610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	1	7
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	2	7
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	3	7
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	4	7
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	5	7
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	6	7
ENSCSEP00000013212	zf-C2H2	PF00096.26	7.1e-42	7	7
ENSCSEP00000013212	zf-met	PF12874.7	4.8e-15	1	3
ENSCSEP00000013212	zf-met	PF12874.7	4.8e-15	2	3
ENSCSEP00000013212	zf-met	PF12874.7	4.8e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013371	-	2443	-	ENSCSEP00000013212	579 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000008533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008533	-	70	41.818	ENSCSEG00000019182	-	64	41.633
ENSCSEG00000008533	-	77	47.598	ENSCSEG00000010423	-	99	41.048
ENSCSEG00000008533	-	72	46.396	ENSCSEG00000020730	-	97	47.761
ENSCSEG00000008533	-	63	43.085	ENSCSEG00000008525	-	66	48.571
ENSCSEG00000008533	-	68	53.333	ENSCSEG00000008528	-	83	53.333
ENSCSEG00000008533	-	50	37.591	ENSCSEG00000005935	ZNF319	91	38.340
ENSCSEG00000008533	-	54	37.327	ENSCSEG00000011586	znf236	83	37.156
ENSCSEG00000008533	-	69	48.864	ENSCSEG00000010453	-	89	41.935
ENSCSEG00000008533	-	69	42.273	ENSCSEG00000004265	-	91	41.919
ENSCSEG00000008533	-	74	41.687	ENSCSEG00000003757	-	99	49.701
ENSCSEG00000008533	-	51	44.560	ENSCSEG00000019029	-	94	43.624
ENSCSEG00000008533	-	67	50.417	ENSCSEG00000020696	-	98	50.676
ENSCSEG00000008533	-	80	46.237	ENSCSEG00000008510	-	93	39.406
ENSCSEG00000008533	-	65	46.853	ENSCSEG00000008502	-	95	45.833
ENSCSEG00000008533	-	54	50.769	ENSCSEG00000018815	-	96	49.012
ENSCSEG00000008533	-	54	66.667	ENSCSEG00000019047	-	89	66.667
ENSCSEG00000008533	-	72	50.725	ENSCSEG00000008539	-	91	42.619
ENSCSEG00000008533	-	50	39.322	ENSCSEG00000004721	-	68	41.418
ENSCSEG00000008533	-	60	31.126	ENSCSEG00000018571	-	52	33.803
ENSCSEG00000008533	-	52	39.630	ENSCSEG00000005983	-	96	41.209
ENSCSEG00000008533	-	68	44.203	ENSCSEG00000018822	-	99	44.203
ENSCSEG00000008533	-	55	46.575	ENSCSEG00000018829	-	73	46.575
ENSCSEG00000008533	-	70	51.064	ENSCSEG00000013398	-	94	47.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008533	-	52	46.429	ENSAPOG00000018480	-	65	46.875	Acanthochromis_polyacanthus
ENSCSEG00000008533	-	52	49.660	ENSACIG00000013750	-	86	49.660	Amphilophus_citrinellus
ENSCSEG00000008533	-	70	47.085	ENSACIG00000017050	-	99	48.227	Amphilophus_citrinellus
ENSCSEG00000008533	-	68	48.555	ENSACIG00000000286	-	81	48.454	Amphilophus_citrinellus
ENSCSEG00000008533	-	69	44.681	ENSAOCG00000012823	-	78	45.312	Amphiprion_ocellaris
ENSCSEG00000008533	-	66	39.179	ENSAOCG00000015987	-	66	39.179	Amphiprion_ocellaris
ENSCSEG00000008533	-	58	41.905	ENSAPEG00000018271	-	72	43.750	Amphiprion_percula
ENSCSEG00000008533	-	69	44.615	ENSAPEG00000005566	-	73	44.615	Amphiprion_percula
ENSCSEG00000008533	-	76	47.312	ENSATEG00000008771	-	84	45.399	Anabas_testudineus
ENSCSEG00000008533	-	67	54.651	ENSATEG00000011221	-	79	54.651	Anabas_testudineus
ENSCSEG00000008533	-	69	48.571	ENSACLG00000011237	-	97	48.214	Astatotilapia_calliptera
ENSCSEG00000008533	-	52	46.821	ENSACLG00000023979	-	98	44.886	Astatotilapia_calliptera
ENSCSEG00000008533	-	67	50.847	ENSACLG00000024308	-	99	48.018	Astatotilapia_calliptera
ENSCSEG00000008533	-	52	36.792	ENSACLG00000003679	-	86	36.792	Astatotilapia_calliptera
ENSCSEG00000008533	-	52	55.682	ENSAMXG00000017959	-	95	55.682	Astyanax_mexicanus
ENSCSEG00000008533	-	58	44.231	ENSAMXG00000037382	-	73	44.231	Astyanax_mexicanus
ENSCSEG00000008533	-	56	49.455	ENSAMXG00000034402	-	94	49.455	Astyanax_mexicanus
ENSCSEG00000008533	-	50	51.064	ENSAMXG00000035875	-	99	51.064	Astyanax_mexicanus
ENSCSEG00000008533	-	50	44.974	ENSAMXG00000042174	-	91	48.485	Astyanax_mexicanus
ENSCSEG00000008533	-	68	48.315	ENSCVAG00000019705	-	87	48.148	Cyprinodon_variegatus
ENSCSEG00000008533	-	55	42.701	ENSCVAG00000021107	-	97	42.692	Cyprinodon_variegatus
ENSCSEG00000008533	-	81	45.055	ENSCVAG00000007073	-	91	45.055	Cyprinodon_variegatus
ENSCSEG00000008533	-	66	45.228	ENSCVAG00000022991	-	99	40.845	Cyprinodon_variegatus
ENSCSEG00000008533	-	54	40.268	ENSCVAG00000016092	-	75	39.259	Cyprinodon_variegatus
ENSCSEG00000008533	-	50	43.273	ENSEBUG00000008107	-	91	43.273	Eptatretus_burgeri
ENSCSEG00000008533	-	53	43.137	ENSEBUG00000007470	-	84	43.137	Eptatretus_burgeri
ENSCSEG00000008533	-	52	48.162	ENSELUG00000013094	-	100	46.403	Esox_lucius
ENSCSEG00000008533	-	63	46.471	ENSELUG00000013342	-	65	46.471	Esox_lucius
ENSCSEG00000008533	-	65	43.868	ENSELUG00000013245	-	96	45.055	Esox_lucius
ENSCSEG00000008533	-	99	32.110	ENSELUG00000016397	-	51	39.844	Esox_lucius
ENSCSEG00000008533	-	58	39.381	ENSELUG00000017463	-	97	41.455	Esox_lucius
ENSCSEG00000008533	-	55	46.400	ENSELUG00000019204	-	93	45.492	Esox_lucius
ENSCSEG00000008533	-	57	43.382	ENSELUG00000018405	-	94	43.382	Esox_lucius
ENSCSEG00000008533	-	69	46.000	ENSELUG00000021391	-	91	39.726	Esox_lucius
ENSCSEG00000008533	-	55	47.619	ENSELUG00000012597	-	99	45.833	Esox_lucius
ENSCSEG00000008533	-	60	36.916	ENSELUG00000020017	-	71	36.916	Esox_lucius
ENSCSEG00000008533	-	50	44.853	ENSELUG00000005912	-	77	44.853	Esox_lucius
ENSCSEG00000008533	-	69	42.529	ENSFHEG00000016718	-	81	35.340	Fundulus_heteroclitus
ENSCSEG00000008533	-	69	43.005	ENSFHEG00000016640	-	99	42.400	Fundulus_heteroclitus
ENSCSEG00000008533	-	69	44.954	ENSFHEG00000016692	-	94	40.310	Fundulus_heteroclitus
ENSCSEG00000008533	-	65	46.763	ENSFHEG00000013794	-	95	44.599	Fundulus_heteroclitus
ENSCSEG00000008533	-	74	44.706	ENSFHEG00000016663	-	92	44.706	Fundulus_heteroclitus
ENSCSEG00000008533	-	68	33.248	ENSGAFG00000013000	-	94	34.152	Gambusia_affinis
ENSCSEG00000008533	-	80	33.721	ENSGAFG00000013053	-	95	34.409	Gambusia_affinis
ENSCSEG00000008533	-	54	43.956	ENSGAFG00000011288	-	96	43.956	Gambusia_affinis
ENSCSEG00000008533	-	52	42.105	ENSGACG00000016248	-	100	50.000	Gasterosteus_aculeatus
ENSCSEG00000008533	-	66	53.023	ENSGACG00000005239	-	99	53.023	Gasterosteus_aculeatus
ENSCSEG00000008533	-	77	46.286	ENSHBUG00000013542	-	95	46.286	Haplochromis_burtoni
ENSCSEG00000008533	-	66	43.434	ENSHBUG00000006977	-	77	40.113	Haplochromis_burtoni
ENSCSEG00000008533	-	53	42.986	ENSHBUG00000003057	-	94	39.768	Haplochromis_burtoni
ENSCSEG00000008533	-	51	46.108	ENSHBUG00000017869	-	72	45.349	Haplochromis_burtoni
ENSCSEG00000008533	-	69	51.724	ENSHCOG00000012592	-	82	51.724	Hippocampus_comes
ENSCSEG00000008533	-	58	40.157	ENSHCOG00000008234	-	75	43.333	Hippocampus_comes
ENSCSEG00000008533	-	51	45.270	ENSHCOG00000002969	-	74	42.073	Hippocampus_comes
ENSCSEG00000008533	-	76	41.818	ENSHCOG00000001942	-	99	47.917	Hippocampus_comes
ENSCSEG00000008533	-	53	42.969	ENSHCOG00000001252	-	96	43.182	Hippocampus_comes
ENSCSEG00000008533	-	69	39.231	ENSHCOG00000001448	-	86	39.231	Hippocampus_comes
ENSCSEG00000008533	-	67	49.000	ENSHCOG00000019465	-	93	48.947	Hippocampus_comes
ENSCSEG00000008533	-	65	50.000	ENSHCOG00000001308	-	87	50.595	Hippocampus_comes
ENSCSEG00000008533	-	68	51.250	ENSHCOG00000014874	-	92	51.250	Hippocampus_comes
ENSCSEG00000008533	-	52	42.361	ENSHCOG00000019481	-	88	45.339	Hippocampus_comes
ENSCSEG00000008533	-	69	47.636	ENSHCOG00000012617	-	97	46.520	Hippocampus_comes
ENSCSEG00000008533	-	70	48.333	ENSHCOG00000001338	-	87	48.333	Hippocampus_comes
ENSCSEG00000008533	-	69	46.154	ENSHCOG00000015414	-	94	39.568	Hippocampus_comes
ENSCSEG00000008533	-	71	47.038	ENSHCOG00000011411	-	98	47.619	Hippocampus_comes
ENSCSEG00000008533	-	70	43.421	ENSHCOG00000000138	-	93	37.557	Hippocampus_comes
ENSCSEG00000008533	-	70	48.175	ENSHCOG00000015463	-	94	47.418	Hippocampus_comes
ENSCSEG00000008533	-	69	52.941	ENSHCOG00000000627	-	82	50.532	Hippocampus_comes
ENSCSEG00000008533	-	78	42.347	ENSHCOG00000014796	-	97	40.611	Hippocampus_comes
ENSCSEG00000008533	-	68	52.500	ENSHCOG00000015459	-	88	52.500	Hippocampus_comes
ENSCSEG00000008533	-	70	48.227	ENSHCOG00000021033	-	94	48.227	Hippocampus_comes
ENSCSEG00000008533	-	50	42.500	ENSHCOG00000010212	-	55	42.500	Hippocampus_comes
ENSCSEG00000008533	-	72	47.059	ENSHCOG00000001631	-	88	45.238	Hippocampus_comes
ENSCSEG00000008533	-	69	46.939	ENSHCOG00000001638	-	99	47.619	Hippocampus_comes
ENSCSEG00000008533	-	57	54.762	ENSIPUG00000023635	-	92	57.831	Ictalurus_punctatus
ENSCSEG00000008533	-	80	41.844	ENSKMAG00000000795	-	99	42.908	Kryptolebias_marmoratus
ENSCSEG00000008533	-	50	37.342	ENSLBEG00000025305	-	85	31.353	Labrus_bergylta
ENSCSEG00000008533	-	56	41.509	ENSLBEG00000010132	-	71	41.509	Labrus_bergylta
ENSCSEG00000008533	-	50	39.781	ENSMAMG00000022502	-	94	39.781	Mastacembelus_armatus
ENSCSEG00000008533	-	68	42.169	ENSMAMG00000022145	-	92	42.169	Mastacembelus_armatus
ENSCSEG00000008533	-	66	45.699	ENSMZEG00005025726	-	98	45.263	Maylandia_zebra
ENSCSEG00000008533	-	53	45.679	ENSMZEG00005025345	-	89	46.203	Maylandia_zebra
ENSCSEG00000008533	-	69	36.047	ENSMALG00000012043	-	98	45.914	Monopterus_albus
ENSCSEG00000008533	-	54	45.070	ENSNGAG00000016559	-	68	45.070	Nannospalax_galili
ENSCSEG00000008533	-	50	35.556	ENSNBRG00000009811	-	87	37.805	Neolamprologus_brichardi
ENSCSEG00000008533	-	52	48.889	ENSONIG00000007810	-	100	49.242	Oreochromis_niloticus
ENSCSEG00000008533	-	54	46.703	ENSONIG00000007811	-	99	45.645	Oreochromis_niloticus
ENSCSEG00000008533	-	52	55.422	ENSONIG00000017387	-	99	40.449	Oreochromis_niloticus
ENSCSEG00000008533	-	55	47.656	ENSONIG00000020719	-	89	47.656	Oreochromis_niloticus
ENSCSEG00000008533	-	80	48.913	ENSONIG00000016734	-	96	48.913	Oreochromis_niloticus
ENSCSEG00000008533	-	51	56.164	ENSONIG00000008188	-	100	41.697	Oreochromis_niloticus
ENSCSEG00000008533	-	51	40.755	ENSONIG00000014850	-	98	40.755	Oreochromis_niloticus
ENSCSEG00000008533	-	73	48.023	ENSORLG00000024174	-	96	47.853	Oryzias_latipes
ENSCSEG00000008533	-	53	46.947	ENSORLG00020009180	-	87	46.809	Oryzias_latipes_hni
ENSCSEG00000008533	-	72	45.387	ENSORLG00015011871	-	98	47.584	Oryzias_latipes_hsok
ENSCSEG00000008533	-	54	44.161	ENSPSIG00000005128	-	100	44.922	Pelodiscus_sinensis
ENSCSEG00000008533	-	69	42.471	ENSPSIG00000000760	-	84	41.923	Pelodiscus_sinensis
ENSCSEG00000008533	-	66	46.774	ENSPMGG00000010453	-	95	44.867	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	66	43.902	ENSPMGG00000014788	-	97	43.902	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	69	38.624	ENSPMGG00000001270	-	76	36.279	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	65	47.083	ENSPMGG00000018639	-	98	53.333	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	69	42.473	ENSPMGG00000006845	-	85	42.473	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	54	46.154	ENSPMGG00000005348	-	75	41.897	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	66	46.847	ENSPMGG00000005349	-	90	46.847	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	66	45.662	ENSPMGG00000011473	-	94	45.878	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	67	44.706	ENSPMGG00000001543	-	91	45.413	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	54	44.654	ENSPMGG00000023303	-	98	44.654	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	80	47.111	ENSPMGG00000000636	-	92	47.222	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	58	41.954	ENSPMGG00000022779	-	89	43.525	Periophthalmus_magnuspinnatus
ENSCSEG00000008533	-	55	46.552	ENSPFOG00000004414	-	100	46.552	Poecilia_formosa
ENSCSEG00000008533	-	54	49.635	ENSPFOG00000007919	-	100	49.635	Poecilia_formosa
ENSCSEG00000008533	-	65	44.177	ENSPFOG00000001339	-	100	46.825	Poecilia_formosa
ENSCSEG00000008533	-	71	42.439	ENSPFOG00000024470	-	99	42.135	Poecilia_formosa
ENSCSEG00000008533	-	69	46.595	ENSPLAG00000011798	-	99	46.595	Poecilia_latipinna
ENSCSEG00000008533	-	69	46.595	ENSPLAG00000021050	-	99	46.595	Poecilia_latipinna
ENSCSEG00000008533	-	52	45.312	ENSPLAG00000020794	-	78	45.312	Poecilia_latipinna
ENSCSEG00000008533	-	50	34.164	ENSPLAG00000021238	-	66	34.164	Poecilia_latipinna
ENSCSEG00000008533	-	71	47.407	ENSPMEG00000023808	-	98	47.407	Poecilia_mexicana
ENSCSEG00000008533	-	69	47.059	ENSPMEG00000014744	-	91	47.059	Poecilia_mexicana
ENSCSEG00000008533	-	53	45.675	ENSPMEG00000003131	-	98	46.707	Poecilia_mexicana
ENSCSEG00000008533	-	68	44.840	ENSPREG00000020014	-	99	46.094	Poecilia_reticulata
ENSCSEG00000008533	-	73	41.176	ENSPNYG00000000700	-	55	41.176	Pundamilia_nyererei
ENSCSEG00000008533	-	52	36.792	ENSPNYG00000012188	-	86	36.792	Pundamilia_nyererei
ENSCSEG00000008533	-	50	50.549	ENSPNYG00000021217	-	82	50.549	Pundamilia_nyererei
ENSCSEG00000008533	-	70	45.263	ENSPNYG00000018372	-	84	38.830	Pundamilia_nyererei
ENSCSEG00000008533	-	70	49.821	ENSPNYG00000018920	-	99	49.821	Pundamilia_nyererei
ENSCSEG00000008533	-	55	50.545	ENSPNAG00000019534	-	86	50.545	Pygocentrus_nattereri
ENSCSEG00000008533	-	55	51.765	ENSPNAG00000021765	-	92	51.765	Pygocentrus_nattereri
ENSCSEG00000008533	-	52	46.619	ENSRNOG00000024056	Zfp17	73	46.619	Rattus_norvegicus
ENSCSEG00000008533	-	72	44.948	ENSSMAG00000015347	-	97	44.948	Scophthalmus_maximus
ENSCSEG00000008533	-	56	49.153	ENSSDUG00000020805	-	89	49.153	Seriola_dumerili
ENSCSEG00000008533	-	67	39.109	ENSSDUG00000015622	-	99	39.109	Seriola_dumerili
ENSCSEG00000008533	-	68	43.500	ENSSDUG00000009425	-	78	43.500	Seriola_dumerili
ENSCSEG00000008533	-	52	47.500	ENSSDUG00000004650	-	97	47.500	Seriola_dumerili
ENSCSEG00000008533	-	69	44.251	ENSSDUG00000007336	-	99	44.251	Seriola_dumerili
ENSCSEG00000008533	-	56	43.415	ENSSLDG00000002756	-	88	43.415	Seriola_lalandi_dorsalis
ENSCSEG00000008533	-	65	44.521	ENSSLDG00000016317	-	75	44.444	Seriola_lalandi_dorsalis
ENSCSEG00000008533	-	65	46.930	ENSSLDG00000005850	-	92	49.206	Seriola_lalandi_dorsalis
ENSCSEG00000008533	-	67	41.711	ENSSPAG00000005739	-	64	41.711	Stegastes_partitus
ENSCSEG00000008533	-	54	45.390	ENSXETG00000027149	-	100	45.390	Xenopus_tropicalis
ENSCSEG00000008533	-	69	43.575	ENSXCOG00000007406	-	99	44.086	Xiphophorus_couchianus
ENSCSEG00000008533	-	70	50.000	ENSXCOG00000009777	-	86	50.000	Xiphophorus_couchianus
ENSCSEG00000008533	-	67	44.526	ENSXCOG00000007957	-	94	44.526	Xiphophorus_couchianus
ENSCSEG00000008533	-	69	43.750	ENSXCOG00000016860	-	97	47.598	Xiphophorus_couchianus
ENSCSEG00000008533	-	53	42.391	ENSXCOG00000001200	-	90	44.615	Xiphophorus_couchianus
ENSCSEG00000008533	-	70	46.468	ENSXMAG00000026477	-	97	44.134	Xiphophorus_maculatus
ENSCSEG00000008533	-	53	45.627	ENSXMAG00000025344	-	86	43.223	Xiphophorus_maculatus
ENSCSEG00000008533	-	69	44.322	ENSXMAG00000026679	-	99	44.322	Xiphophorus_maculatus
ENSCSEG00000008533	-	65	44.891	ENSXMAG00000027906	-	99	44.948	Xiphophorus_maculatus
ENSCSEG00000008533	-	71	45.503	ENSXMAG00000024641	-	98	44.565	Xiphophorus_maculatus
ENSCSEG00000008533	-	51	46.939	ENSXMAG00000020039	-	96	43.825	Xiphophorus_maculatus