EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008542 (Gene tree)
Gene ID: 103391980
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4475 bases
Position: chr16:8638984-8643458
Accession: 103391980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013224	RNase_Zc3h12a	PF11977.8	1.7e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013383	-	2806	XM_017040013	ENSCSEP00000013224	901 (aa)	XP_016895502	UPI0007DC9FD4

Gene Model

Click here to download ENSCSEG00000008542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008542	-	58	61.895	ENSCSEG00000010073	-	81	76.793

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008542	-	99	55.847	ENSAPOG00000001632	-	93	73.604	Acanthochromis_polyacanthus
ENSCSEG00000008542	-	67	54.167	ENSAPOG00000015355	-	67	53.670	Acanthochromis_polyacanthus
ENSCSEG00000008542	-	72	56.250	ENSACIG00000001362	-	80	54.834	Amphilophus_citrinellus
ENSCSEG00000008542	-	66	52.859	ENSAOCG00000003866	-	87	76.250	Amphiprion_ocellaris
ENSCSEG00000008542	-	80	52.786	ENSAPEG00000005727	-	94	60.736	Amphiprion_percula
ENSCSEG00000008542	-	100	62.028	ENSATEG00000002260	-	96	78.388	Anabas_testudineus
ENSCSEG00000008542	-	99	59.765	ENSACLG00000018493	-	100	59.531	Astatotilapia_calliptera
ENSCSEG00000008542	-	99	43.652	ENSACLG00000027924	-	83	47.738	Astatotilapia_calliptera
ENSCSEG00000008542	-	99	43.461	ENSCVAG00000002328	-	50	62.603	Cyprinodon_variegatus
ENSCSEG00000008542	-	99	52.306	ENSELUG00000005470	-	99	54.671	Esox_lucius
ENSCSEG00000008542	-	68	60.041	ENSELUG00000009319	-	75	60.738	Esox_lucius
ENSCSEG00000008542	-	71	63.043	ENSFHEG00000021225	-	85	61.212	Fundulus_heteroclitus
ENSCSEG00000008542	-	71	52.227	ENSGMOG00000017975	-	99	51.677	Gadus_morhua
ENSCSEG00000008542	-	68	51.491	ENSGAFG00000005290	-	52	57.600	Gambusia_affinis
ENSCSEG00000008542	-	72	56.049	ENSGACG00000001339	-	100	56.031	Gasterosteus_aculeatus
ENSCSEG00000008542	-	99	43.542	ENSHBUG00000006831	-	83	47.738	Haplochromis_burtoni
ENSCSEG00000008542	-	67	52.358	ENSHCOG00000008878	-	66	61.272	Hippocampus_comes
ENSCSEG00000008542	-	67	52.006	ENSKMAG00000011694	-	52	58.517	Kryptolebias_marmoratus
ENSCSEG00000008542	-	99	61.809	ENSLBEG00000012710	-	99	62.979	Labrus_bergylta
ENSCSEG00000008542	-	50	63.362	ENSLBEG00000012554	-	86	64.815	Labrus_bergylta
ENSCSEG00000008542	-	83	48.315	ENSMAMG00000021794	-	88	72.266	Mastacembelus_armatus
ENSCSEG00000008542	-	100	60.718	ENSMAMG00000020372	-	100	61.352	Mastacembelus_armatus
ENSCSEG00000008542	-	99	59.658	ENSMZEG00005019137	-	90	76.129	Maylandia_zebra
ENSCSEG00000008542	-	99	44.161	ENSMZEG00005007718	-	83	47.872	Maylandia_zebra
ENSCSEG00000008542	-	86	47.009	ENSMMOG00000005728	-	88	63.694	Mola_mola
ENSCSEG00000008542	-	99	58.180	ENSMMOG00000019526	-	93	58.180	Mola_mola
ENSCSEG00000008542	-	99	58.805	ENSNBRG00000012175	-	90	76.774	Neolamprologus_brichardi
ENSCSEG00000008542	-	99	43.762	ENSNBRG00000006978	-	83	47.557	Neolamprologus_brichardi
ENSCSEG00000008542	-	99	43.504	ENSONIG00000012268	-	65	62.370	Oreochromis_niloticus
ENSCSEG00000008542	-	83	46.416	ENSORLG00000029243	-	96	45.930	Oryzias_latipes
ENSCSEG00000008542	-	99	42.594	ENSORLG00020017005	-	99	43.182	Oryzias_latipes_hni
ENSCSEG00000008542	-	99	42.667	ENSORLG00015015211	-	99	42.872	Oryzias_latipes_hsok
ENSCSEG00000008542	-	99	43.769	ENSOMEG00000006666	-	99	43.603	Oryzias_melastigma
ENSCSEG00000008542	-	60	64.969	ENSPMGG00000020126	-	71	65.864	Periophthalmus_magnuspinnatus
ENSCSEG00000008542	-	66	51.917	ENSPLAG00000009867	-	64	50.784	Poecilia_latipinna
ENSCSEG00000008542	-	68	51.562	ENSPMEG00000006624	-	65	50.078	Poecilia_mexicana
ENSCSEG00000008542	-	99	54.821	ENSPMEG00000011676	-	99	55.471	Poecilia_mexicana
ENSCSEG00000008542	-	98	54.039	ENSPREG00000001607	-	78	80.992	Poecilia_reticulata
ENSCSEG00000008542	-	68	52.100	ENSPREG00000010838	-	65	51.567	Poecilia_reticulata
ENSCSEG00000008542	-	100	65.742	ENSSMAG00000007258	-	100	66.631	Scophthalmus_maximus
ENSCSEG00000008542	-	99	44.256	ENSSMAG00000007545	-	83	48.086	Scophthalmus_maximus
ENSCSEG00000008542	-	99	64.973	ENSSDUG00000013237	-	99	68.935	Seriola_dumerili
ENSCSEG00000008542	-	99	43.285	ENSSDUG00000021864	-	83	47.529	Seriola_dumerili
ENSCSEG00000008542	-	99	43.109	ENSSLDG00000012268	-	83	47.288	Seriola_lalandi_dorsalis
ENSCSEG00000008542	-	99	67.129	ENSSLDG00000004886	-	99	67.910	Seriola_lalandi_dorsalis
ENSCSEG00000008542	-	99	62.621	ENSSPAG00000001850	-	99	62.513	Stegastes_partitus
ENSCSEG00000008542	-	67	52.769	ENSSPAG00000009485	-	99	44.400	Stegastes_partitus
ENSCSEG00000008542	-	67	52.352	ENSTRUG00000022519	-	50	61.010	Takifugu_rubripes
ENSCSEG00000008542	-	73	47.246	ENSTNIG00000014519	-	92	76.829	Tetraodon_nigroviridis
ENSCSEG00000008542	-	99	53.788	ENSXMAG00000014715	-	89	81.148	Xiphophorus_maculatus
ENSCSEG00000008542	-	68	52.696	ENSXMAG00000027171	-	65	52.598	Xiphophorus_maculatus