EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSEG00000008626 (Gene tree)
Gene ID
-
Gene Symbol
rnf17
Alias
TDRD4|im:7147535|wu:fj98c04
Full Name
ring finger protein 17
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
11213 bases
Position
chr16:8766681-8777893
Accession
103391962
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000013626TUDORPF00567.242e-7014
ENSCSEP00000013626TUDORPF00567.242e-7024
ENSCSEP00000013626TUDORPF00567.242e-7034
ENSCSEP00000013626TUDORPF00567.242e-7044
ENSCSEP00000013614TUDORPF00567.243.5e-7014
ENSCSEP00000013614TUDORPF00567.243.5e-7024
ENSCSEP00000013614TUDORPF00567.243.5e-7034
ENSCSEP00000013614TUDORPF00567.243.5e-7044
ENSCSEP00000013688TUDORPF00567.241.3e-5713
ENSCSEP00000013688TUDORPF00567.241.3e-5723
ENSCSEP00000013688TUDORPF00567.241.3e-5733
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000013773-4266XM_008328458ENSCSEP000000136141421 (aa)XP_008326680-
ENSCSET00000013786-3837-ENSCSEP000000136261278 (aa)--
ENSCSET00000013849-4050-ENSCSEP000000136881349 (aa)--
Gene Model
Click here to download ENSCSEG00000008626's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008626's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000008626rnf178131.643ENSG00000132972RNF179833.906Homo_sapiens
ENSCSEG00000008626rnf179755.806ENSAPOG00000017034rnf179355.806Acanthochromis_polyacanthus
ENSCSEG00000008626rnf179632.249ENSAMEG00000017340RNF179232.402Ailuropoda_melanoleuca
ENSCSEG00000008626rnf179655.922ENSAOCG00000018283rnf1710052.872Amphiprion_ocellaris
ENSCSEG00000008626rnf1710052.843ENSAPEG00000022338rnf179953.139Amphiprion_percula
ENSCSEG00000008626rnf179758.580ENSATEG00000002067rnf179658.741Anabas_testudineus
ENSCSEG00000008626rnf177937.097ENSAPLG00000003969RNF177837.097Anas_platyrhynchos
ENSCSEG00000008626rnf177533.333ENSACAG00000001418RNF176633.271Anolis_carolinensis
ENSCSEG00000008626rnf177430.900ENSANAG00000029969RNF179230.795Aotus_nancymaae
ENSCSEG00000008626rnf179955.369ENSACLG00000018279rnf179555.621Astatotilapia_calliptera
ENSCSEG00000008626rnf179243.900ENSAMXG00000011002rnf179843.900Astyanax_mexicanus
ENSCSEG00000008626rnf179630.379ENSCJAG00000018937RNF179834.069Callithrix_jacchus
ENSCSEG00000008626rnf178532.367ENSCAFG00000007418RNF178232.430Canis_familiaris
ENSCSEG00000008626rnf178032.385ENSCHIG00000026716RNF179832.866Capra_hircus
ENSCSEG00000008626rnf179630.099ENSTSYG00000000365RNF179834.062Carlito_syrichta
ENSCSEG00000008626rnf177130.683ENSCAPG00000012908RNF177530.683Cavia_aperea
ENSCSEG00000008626rnf178532.776ENSCCAG00000026725RNF179833.438Cebus_capucinus
ENSCSEG00000008626rnf178131.407ENSCATG00000040352RNF179833.746Cercocebus_atys
ENSCSEG00000008626rnf177533.302ENSCLAG00000004127RNF176533.582Chinchilla_lanigera
ENSCSEG00000008626rnf178131.485ENSCSAG00000018019RNF177431.485Chlorocebus_sabaeus
ENSCSEG00000008626rnf179931.167ENSCPBG00000020920RNF179730.933Chrysemys_picta_bellii
ENSCSEG00000008626rnf178131.240ENSCANG00000032927RNF179833.953Colobus_angolensis_palliatus
ENSCSEG00000008626rnf179032.455ENSCGRG00001022658Rnf178133.393Cricetulus_griseus_chok1gshd
ENSCSEG00000008626rnf179032.455ENSCGRG00000009924Rnf178133.393Cricetulus_griseus_crigri
ENSCSEG00000008626rnf178953.741ENSCVAG00000017008rnf179153.951Cyprinodon_variegatus
ENSCSEG00000008626rnf179940.462ENSDARG00000056387rnf179940.462Danio_rerio
ENSCSEG00000008626rnf178632.385ENSDNOG00000006115RNF178032.477Dasypus_novemcinctus
ENSCSEG00000008626rnf178632.712ENSECAG00000017152RNF178032.712Equus_caballus
ENSCSEG00000008626rnf176830.472ENSEEUG00000000332RNF176530.472Erinaceus_europaeus
ENSCSEG00000008626rnf179645.141ENSELUG00000005626rnf178946.844Esox_lucius
ENSCSEG00000008626rnf178432.249ENSFCAG00000004914RNF179832.441Felis_catus
ENSCSEG00000008626rnf178131.987ENSFALG00000008766RNF177931.987Ficedula_albicollis
ENSCSEG00000008626rnf177532.532ENSFDAG00000017857RNF176432.747Fukomys_damarensis
ENSCSEG00000008626rnf179750.320ENSFHEG00000014822rnf179350.982Fundulus_heteroclitus
ENSCSEG00000008626rnf175930.346ENSGALG00000045414-9830.189Gallus_gallus
ENSCSEG00000008626rnf179153.391ENSGAFG00000004463rnf179953.478Gambusia_affinis
ENSCSEG00000008626rnf177257.885ENSGACG00000001340-10060.000Gasterosteus_aculeatus
ENSCSEG00000008626rnf178131.643ENSGGOG00000014491RNF179833.906Gorilla_gorilla
ENSCSEG00000008626rnf179955.872ENSHBUG00000003554rnf179556.124Haplochromis_burtoni
ENSCSEG00000008626rnf177732.345ENSHGLG00000007270RNF176632.677Heterocephalus_glaber_female
ENSCSEG00000008626rnf177732.255ENSHGLG00100017393RNF176732.587Heterocephalus_glaber_male
ENSCSEG00000008626rnf177665.789ENSHCOG00000017676rnf179465.789Hippocampus_comes
ENSCSEG00000008626rnf179044.719ENSIPUG00000001087rnf179343.766Ictalurus_punctatus
ENSCSEG00000008626rnf179031.927ENSJJAG00000016584Rnf178731.927Jaculus_jaculus
ENSCSEG00000008626rnf179955.164ENSKMAG00000013403rnf179555.080Kryptolebias_marmoratus
ENSCSEG00000008626rnf179356.412ENSLBEG00000014910rnf179256.412Labrus_bergylta
ENSCSEG00000008626rnf176535.653ENSLACG00000000323RNF178135.155Latimeria_chalumnae
ENSCSEG00000008626rnf179634.032ENSLOCG00000010768rnf179135.410Lepisosteus_oculatus
ENSCSEG00000008626rnf178131.323ENSMFAG00000032388RNF179833.746Macaca_fascicularis
ENSCSEG00000008626rnf178131.403ENSMMUG00000014610RNF179833.746Macaca_mulatta
ENSCSEG00000008626rnf178131.403ENSMNEG00000011234RNF179833.746Macaca_nemestrina
ENSCSEG00000008626rnf178131.323ENSMLEG00000030227RNF177831.323Mandrillus_leucophaeus
ENSCSEG00000008626rnf179256.720ENSMAMG00000020403rnf179957.831Mastacembelus_armatus
ENSCSEG00000008626rnf179955.621ENSMZEG00005019166rnf179555.621Maylandia_zebra
ENSCSEG00000008626rnf177940.323ENSMGAG00000015138RNF179040.323Meleagris_gallopavo
ENSCSEG00000008626rnf178433.491ENSMAUG00000004788Rnf177833.776Mesocricetus_auratus
ENSCSEG00000008626rnf178533.520ENSMICG00000010364RNF179833.489Microcebus_murinus
ENSCSEG00000008626rnf175932.683ENSMOCG00000011818-9932.683Microtus_ochrogaster
ENSCSEG00000008626rnf178178.125ENSMMOG00000019514rnf179678.125Mola_mola
ENSCSEG00000008626rnf179037.931ENSMODG00000007827RNF178337.931Monodelphis_domestica
ENSCSEG00000008626rnf179953.987ENSMALG00000016943rnf179954.128Monopterus_albus
ENSCSEG00000008626rnf178434.366MGP_CAROLIEiJ_G0019337Rnf177934.366Mus_caroli
ENSCSEG00000008626rnf177733.363ENSMUSG00000000365Rnf176633.513Mus_musculus
ENSCSEG00000008626rnf178434.305MGP_PahariEiJ_G0030355Rnf177934.305Mus_pahari
ENSCSEG00000008626rnf177733.303MGP_SPRETEiJ_G0020228Rnf176633.453Mus_spretus
ENSCSEG00000008626rnf178432.276ENSMPUG00000013305RNF178132.617Mustela_putorius_furo
ENSCSEG00000008626rnf178031.450ENSMLUG00000003903RNF176532.169Myotis_lucifugus
ENSCSEG00000008626rnf178432.990ENSNGAG00000013553Rnf177933.302Nannospalax_galili
ENSCSEG00000008626rnf179255.017ENSNBRG00000012006rnf179755.017Neolamprologus_brichardi
ENSCSEG00000008626rnf177532.169ENSNLEG00000013780RNF179833.437Nomascus_leucogenys
ENSCSEG00000008626rnf178431.702ENSOPRG00000016743-6731.533Ochotona_princeps
ENSCSEG00000008626rnf179955.109ENSONIG00000015746rnf179855.805Oreochromis_niloticus
ENSCSEG00000008626rnf179031.709ENSOCUG00000007384RNF178831.709Oryctolagus_cuniculus
ENSCSEG00000008626rnf179646.044ENSORLG00000012818rnf179946.375Oryzias_latipes
ENSCSEG00000008626rnf179748.868ENSORLG00020009879-9946.062Oryzias_latipes_hni
ENSCSEG00000008626rnf179748.788ENSORLG00015013027-9946.226Oryzias_latipes_hsok
ENSCSEG00000008626rnf178853.504ENSOMEG00000009891rnf179553.412Oryzias_melastigma
ENSCSEG00000008626rnf178131.609ENSOGAG00000014803RNF177431.609Otolemur_garnettii
ENSCSEG00000008626rnf178732.165ENSOARG00000014641RNF178332.165Ovis_aries
ENSCSEG00000008626rnf178031.721ENSPPAG00000028779RNF179833.906Pan_paniscus
ENSCSEG00000008626rnf178432.528ENSPPRG00000009230RNF179832.756Panthera_pardus
ENSCSEG00000008626rnf178432.435ENSPTIG00000001738RNF179832.598Panthera_tigris_altaica
ENSCSEG00000008626rnf178131.643ENSPTRG00000005713RNF179833.906Pan_troglodytes
ENSCSEG00000008626rnf178131.566ENSPANG00000007640RNF179833.901Papio_anubis
ENSCSEG00000008626rnf178041.759ENSPKIG00000001648rnf179041.759Paramormyrops_kingsleyae
ENSCSEG00000008626rnf177435.747ENSPSIG00000011245RNF179934.368Pelodiscus_sinensis
ENSCSEG00000008626rnf178733.932ENSPEMG00000008693Rnf178133.932Peromyscus_maniculatus_bairdii
ENSCSEG00000008626rnf177533.971ENSPCIG00000009190-9233.406Phascolarctos_cinereus
ENSCSEG00000008626rnf179752.900ENSPFOG00000007124rnf179155.017Poecilia_formosa
ENSCSEG00000008626rnf179753.753ENSPLAG00000006198rnf179155.753Poecilia_latipinna
ENSCSEG00000008626rnf179755.085ENSPMEG00000022432rnf179555.937Poecilia_mexicana
ENSCSEG00000008626rnf178556.856ENSPREG00000001414rnf179357.298Poecilia_reticulata
ENSCSEG00000008626rnf178131.337ENSPPYG00000005215RNF177431.419Pongo_abelii
ENSCSEG00000008626rnf177742.647ENSPVAG00000013021RNF177242.647Pteropus_vampyrus
ENSCSEG00000008626rnf179145.234ENSPNAG00000027505rnf179946.561Pygocentrus_nattereri
ENSCSEG00000008626rnf178434.023ENSRNOG00000008059Rnf177934.023Rattus_norvegicus
ENSCSEG00000008626rnf178131.040ENSRBIG00000027010RNF177831.124Rhinopithecus_bieti
ENSCSEG00000008626rnf178131.209ENSRROG00000022801RNF179833.901Rhinopithecus_roxellana
ENSCSEG00000008626rnf179630.243ENSSBOG00000021661RNF179833.645Saimiri_boliviensis_boliviensis
ENSCSEG00000008626rnf178734.296ENSSHAG00000005609RNF178134.296Sarcophilus_harrisii
ENSCSEG00000008626rnf178143.102ENSSFOG00015023037rnf178943.102Scleropages_formosus
ENSCSEG00000008626rnf179757.048ENSSMAG00000007429rnf179456.550Scophthalmus_maximus
ENSCSEG00000008626rnf179760.029ENSSDUG00000013530rnf179760.677Seriola_dumerili
ENSCSEG00000008626rnf178359.504ENSSLDG00000019577rnf179660.275Seriola_lalandi_dorsalis
ENSCSEG00000008626rnf176837.063ENSSARG00000003016RNF175437.063Sorex_araneus
ENSCSEG00000008626rnf177636.831ENSSPUG00000008917RNF177036.831Sphenodon_punctatus
ENSCSEG00000008626rnf179061.480ENSSPAG00000001925rnf179756.984Stegastes_partitus
ENSCSEG00000008626rnf178131.111ENSSSCG00000009572RNF178231.142Sus_scrofa
ENSCSEG00000008626rnf176833.094ENSTGUG00000011267-9933.140Taeniopygia_guttata
ENSCSEG00000008626rnf175936.165ENSTGUG00000011272-9936.165Taeniopygia_guttata
ENSCSEG00000008626rnf179943.737ENSTRUG00000015498rnf179942.424Takifugu_rubripes
ENSCSEG00000008626rnf178048.376ENSTNIG00000015681rnf179948.547Tetraodon_nigroviridis
ENSCSEG00000008626rnf176731.425ENSTBEG00000000282RNF175931.425Tupaia_belangeri
ENSCSEG00000008626rnf176734.627ENSTTRG00000012698RNF175835.047Tursiops_truncatus
ENSCSEG00000008626rnf175243.662ENSVPAG00000011388RNF175041.509Vicugna_pacos
ENSCSEG00000008626rnf178732.350ENSVVUG00000006226RNF178532.527Vulpes_vulpes
ENSCSEG00000008626rnf177233.380ENSXETG00000034020RNF179935.109Xenopus_tropicalis
ENSCSEG00000008626rnf179754.808ENSXCOG00000018295rnf179555.292Xiphophorus_couchianus
ENSCSEG00000008626rnf179755.088ENSXMAG00000014747rnf179556.050Xiphophorus_maculatus

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