EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000008737 (Gene tree)
Gene ID: 103388647
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 10564 bases
Position: chr13:12778691-12789254
Accession: 103388647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013566	POP1	PF06978.11	3.4e-35	1	2
ENSCSEP00000013566	POP1	PF06978.11	3.4e-35	2	2
ENSCSEP00000013566	POPLD	PF08170.12	4.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000013724	POP1-201	5343	XM_008323728	ENSCSEP00000013566	986 (aa)	XP_008321950	UPI000495EF20

Gene Model

Click here to download ENSCSEG00000008737's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008737	POP1	100	46.161	ENSG00000104356	POP1	100	45.877	Homo_sapiens
ENSCSEG00000008737	POP1	100	72.654	ENSAPOG00000008198	pop1	100	72.654	Acanthochromis_polyacanthus
ENSCSEG00000008737	POP1	100	45.853	ENSAMEG00000000556	POP1	100	45.802	Ailuropoda_melanoleuca
ENSCSEG00000008737	POP1	100	65.694	ENSACIG00000004169	POP1	100	65.392	Amphilophus_citrinellus
ENSCSEG00000008737	POP1	100	72.929	ENSAOCG00000010991	pop1	100	72.929	Amphiprion_ocellaris
ENSCSEG00000008737	POP1	100	66.500	ENSAPEG00000007607	pop1	100	66.500	Amphiprion_percula
ENSCSEG00000008737	POP1	100	73.747	ENSATEG00000024814	POP1	100	73.447	Anabas_testudineus
ENSCSEG00000008737	POP1	93	47.664	ENSAPLG00000014418	POP1	99	47.352	Anas_platyrhynchos
ENSCSEG00000008737	POP1	99	45.048	ENSACAG00000016083	POP1	100	45.019	Anolis_carolinensis
ENSCSEG00000008737	POP1	87	52.096	ENSANAG00000026360	POP1	99	51.198	Aotus_nancymaae
ENSCSEG00000008737	POP1	100	70.968	ENSACLG00000010951	pop1	100	71.069	Astatotilapia_calliptera
ENSCSEG00000008737	POP1	100	55.392	ENSAMXG00000014483	POP1	100	55.392	Astyanax_mexicanus
ENSCSEG00000008737	POP1	100	46.125	ENSBTAG00000012596	POP1	100	45.747	Bos_taurus
ENSCSEG00000008737	POP1	60	32.941	WBGene00015486	C05D11.9	66	32.941	Caenorhabditis_elegans
ENSCSEG00000008737	POP1	100	46.161	ENSCJAG00000015567	POP1	100	46.169	Callithrix_jacchus
ENSCSEG00000008737	POP1	100	46.621	ENSCAFG00000000469	POP1	100	46.229	Canis_familiaris
ENSCSEG00000008737	POP1	100	46.044	ENSCAFG00020026765	POP1	100	45.663	Canis_lupus_dingo
ENSCSEG00000008737	POP1	100	45.774	ENSCHIG00000017066	POP1	100	45.290	Capra_hircus
ENSCSEG00000008737	POP1	100	45.841	ENSTSYG00000003097	POP1	100	45.558	Carlito_syrichta
ENSCSEG00000008737	POP1	100	44.350	ENSCAPG00000007251	POP1	100	44.213	Cavia_aperea
ENSCSEG00000008737	POP1	100	45.558	ENSCPOG00000002901	POP1	100	45.429	Cavia_porcellus
ENSCSEG00000008737	POP1	100	46.117	ENSCCAG00000018939	POP1	100	45.925	Cebus_capucinus
ENSCSEG00000008737	POP1	100	45.515	ENSCATG00000040916	POP1	100	45.231	Cercocebus_atys
ENSCSEG00000008737	POP1	100	46.051	ENSCLAG00000007208	POP1	97	45.956	Chinchilla_lanigera
ENSCSEG00000008737	POP1	91	48.164	ENSCSAG00000012340	POP1	99	47.474	Chlorocebus_sabaeus
ENSCSEG00000008737	POP1	93	45.670	ENSCHOG00000011432	POP1	96	45.567	Choloepus_hoffmanni
ENSCSEG00000008737	POP1	100	47.923	ENSCPBG00000006373	POP1	100	48.223	Chrysemys_picta_bellii
ENSCSEG00000008737	POP1	81	36.842	ENSCING00000008323	-	87	36.842	Ciona_intestinalis
ENSCSEG00000008737	POP1	100	45.636	ENSCANG00000001647	POP1	100	45.455	Colobus_angolensis_palliatus
ENSCSEG00000008737	POP1	100	44.712	ENSCGRG00001017308	Pop1	100	45.096	Cricetulus_griseus_chok1gshd
ENSCSEG00000008737	POP1	100	42.244	ENSCGRG00000010824	Pop1	100	42.341	Cricetulus_griseus_crigri
ENSCSEG00000008737	POP1	100	69.425	ENSCVAG00000022248	pop1	100	69.425	Cyprinodon_variegatus
ENSCSEG00000008737	POP1	53	52.863	ENSDARG00000102087	pop1	99	52.481	Danio_rerio
ENSCSEG00000008737	POP1	100	43.135	ENSDNOG00000019974	POP1	100	42.857	Dasypus_novemcinctus
ENSCSEG00000008737	POP1	100	39.829	ENSDORG00000015384	Pop1	100	40.095	Dipodomys_ordii
ENSCSEG00000008737	POP1	88	44.974	ENSETEG00000007839	POP1	88	45.315	Echinops_telfairi
ENSCSEG00000008737	POP1	52	43.654	ENSEBUG00000009897	pop1	96	43.654	Eptatretus_burgeri
ENSCSEG00000008737	POP1	100	45.742	ENSEASG00005003189	POP1	98	45.359	Equus_asinus_asinus
ENSCSEG00000008737	POP1	100	45.472	ENSECAG00000024236	POP1	100	45.263	Equus_caballus
ENSCSEG00000008737	POP1	50	72.368	ENSEEUG00000003050	-	53	75.000	Erinaceus_europaeus
ENSCSEG00000008737	POP1	100	61.623	ENSELUG00000003526	pop1	100	62.325	Esox_lucius
ENSCSEG00000008737	POP1	100	45.636	ENSFCAG00000002168	POP1	100	45.066	Felis_catus
ENSCSEG00000008737	POP1	100	45.524	ENSFALG00000005711	POP1	100	45.480	Ficedula_albicollis
ENSCSEG00000008737	POP1	100	45.249	ENSFDAG00000017068	POP1	100	44.528	Fukomys_damarensis
ENSCSEG00000008737	POP1	100	69.301	ENSFHEG00000019518	pop1	100	69.301	Fundulus_heteroclitus
ENSCSEG00000008737	POP1	100	61.384	ENSGMOG00000000659	POP1	100	60.775	Gadus_morhua
ENSCSEG00000008737	POP1	100	66.531	ENSGAFG00000019770	POP1	100	65.923	Gambusia_affinis
ENSCSEG00000008737	POP1	100	64.695	ENSGACG00000003499	pop1	100	64.577	Gasterosteus_aculeatus
ENSCSEG00000008737	POP1	100	47.546	ENSGAGG00000011737	POP1	98	47.409	Gopherus_agassizii
ENSCSEG00000008737	POP1	100	45.928	ENSGGOG00000003176	POP1	100	45.833	Gorilla_gorilla
ENSCSEG00000008737	POP1	100	71.069	ENSHBUG00000021583	pop1	100	71.069	Haplochromis_burtoni
ENSCSEG00000008737	POP1	100	45.687	ENSHGLG00000006029	POP1	100	45.024	Heterocephalus_glaber_female
ENSCSEG00000008737	POP1	100	45.687	ENSHGLG00100016879	POP1	100	45.024	Heterocephalus_glaber_male
ENSCSEG00000008737	POP1	100	62.622	ENSHCOG00000013888	pop1	100	62.123	Hippocampus_comes
ENSCSEG00000008737	POP1	100	53.314	ENSIPUG00000018336	pop1	100	53.026	Ictalurus_punctatus
ENSCSEG00000008737	POP1	100	45.825	ENSSTOG00000011455	POP1	97	45.143	Ictidomys_tridecemlineatus
ENSCSEG00000008737	POP1	100	44.046	ENSJJAG00000013325	Pop1	100	43.756	Jaculus_jaculus
ENSCSEG00000008737	POP1	100	69.706	ENSKMAG00000001346	POP1	100	70.142	Kryptolebias_marmoratus
ENSCSEG00000008737	POP1	100	64.480	ENSLBEG00000024457	POP1	100	64.279	Labrus_bergylta
ENSCSEG00000008737	POP1	92	51.349	ENSLACG00000012498	POP1	97	50.934	Latimeria_chalumnae
ENSCSEG00000008737	POP1	100	53.119	ENSLOCG00000009817	POP1	100	53.457	Lepisosteus_oculatus
ENSCSEG00000008737	POP1	100	46.730	ENSLAFG00000010770	POP1	100	47.014	Loxodonta_africana
ENSCSEG00000008737	POP1	100	46.270	ENSMFAG00000000347	POP1	100	45.498	Macaca_fascicularis
ENSCSEG00000008737	POP1	100	46.183	ENSMNEG00000036870	POP1	100	45.592	Macaca_nemestrina
ENSCSEG00000008737	POP1	100	46.190	ENSMLEG00000034986	POP1	100	45.703	Mandrillus_leucophaeus
ENSCSEG00000008737	POP1	100	73.966	ENSMAMG00000004040	pop1	100	73.360	Mastacembelus_armatus
ENSCSEG00000008737	POP1	100	70.968	ENSMZEG00005025448	pop1	100	70.968	Maylandia_zebra
ENSCSEG00000008737	POP1	100	44.869	ENSMGAG00000012167	POP1	100	45.140	Meleagris_gallopavo
ENSCSEG00000008737	POP1	100	44.957	ENSMAUG00000017537	Pop1	100	45.149	Mesocricetus_auratus
ENSCSEG00000008737	POP1	100	45.905	ENSMICG00000004361	POP1	100	45.706	Microcebus_murinus
ENSCSEG00000008737	POP1	100	44.287	ENSMOCG00000006356	Pop1	100	44.772	Microtus_ochrogaster
ENSCSEG00000008737	POP1	100	64.909	ENSMMOG00000018242	pop1	100	65.112	Mola_mola
ENSCSEG00000008737	POP1	100	46.371	ENSMODG00000006561	POP1	100	46.660	Monodelphis_domestica
ENSCSEG00000008737	POP1	100	72.452	ENSMALG00000012621	POP1	100	72.452	Monopterus_albus
ENSCSEG00000008737	POP1	100	43.619	MGP_CAROLIEiJ_G0019726	Pop1	100	43.810	Mus_caroli
ENSCSEG00000008737	POP1	100	43.714	ENSMUSG00000022325	Pop1	100	43.905	Mus_musculus
ENSCSEG00000008737	POP1	100	43.487	MGP_PahariEiJ_G0019735	Pop1	100	43.678	Mus_pahari
ENSCSEG00000008737	POP1	100	44.106	MGP_SPRETEiJ_G0020622	Pop1	100	44.392	Mus_spretus
ENSCSEG00000008737	POP1	100	46.000	ENSMPUG00000015250	POP1	100	45.619	Mustela_putorius_furo
ENSCSEG00000008737	POP1	100	44.095	ENSMLUG00000010204	POP1	100	44.106	Myotis_lucifugus
ENSCSEG00000008737	POP1	100	45.385	ENSNGAG00000001582	Pop1	100	45.385	Nannospalax_galili
ENSCSEG00000008737	POP1	100	65.524	ENSNBRG00000002356	pop1	100	65.524	Neolamprologus_brichardi
ENSCSEG00000008737	POP1	100	46.300	ENSNLEG00000002541	POP1	100	46.015	Nomascus_leucogenys
ENSCSEG00000008737	POP1	90	52.128	ENSMEUG00000003118	POP1	93	52.128	Notamacropus_eugenii
ENSCSEG00000008737	POP1	100	45.925	ENSOPRG00000007667	POP1	100	45.969	Ochotona_princeps
ENSCSEG00000008737	POP1	100	44.911	ENSODEG00000003984	POP1	100	45.489	Octodon_degus
ENSCSEG00000008737	POP1	100	71.501	ENSONIG00000016445	pop1	100	71.501	Oreochromis_niloticus
ENSCSEG00000008737	POP1	60	47.140	ENSOANG00000001278	-	94	47.140	Ornithorhynchus_anatinus
ENSCSEG00000008737	POP1	100	44.747	ENSOCUG00000017400	POP1	100	44.844	Oryctolagus_cuniculus
ENSCSEG00000008737	POP1	100	70.010	ENSORLG00000002839	pop1	100	70.204	Oryzias_latipes
ENSCSEG00000008737	POP1	100	63.547	ENSORLG00020022450	POP1	96	67.742	Oryzias_latipes_hni
ENSCSEG00000008737	POP1	100	70.071	ENSORLG00015012746	POP1	100	70.071	Oryzias_latipes_hsok
ENSCSEG00000008737	POP1	100	67.748	ENSOMEG00000006915	pop1	99	67.647	Oryzias_melastigma
ENSCSEG00000008737	POP1	100	45.913	ENSOGAG00000001466	POP1	100	45.913	Otolemur_garnettii
ENSCSEG00000008737	POP1	100	46.351	ENSPPAG00000018410	POP1	100	46.066	Pan_paniscus
ENSCSEG00000008737	POP1	100	45.272	ENSPPRG00000005002	POP1	100	44.795	Panthera_pardus
ENSCSEG00000008737	POP1	100	45.213	ENSPTIG00000016527	POP1	100	44.645	Panthera_tigris_altaica
ENSCSEG00000008737	POP1	100	46.445	ENSPTRG00000020458	POP1	100	46.161	Pan_troglodytes
ENSCSEG00000008737	POP1	100	46.219	ENSPANG00000009704	POP1	100	45.446	Papio_anubis
ENSCSEG00000008737	POP1	100	56.052	ENSPKIG00000016325	POP1	100	56.548	Paramormyrops_kingsleyae
ENSCSEG00000008737	POP1	100	46.351	ENSPSIG00000012343	POP1	100	46.344	Pelodiscus_sinensis
ENSCSEG00000008737	POP1	100	59.770	ENSPMGG00000022253	POP1	100	59.195	Periophthalmus_magnuspinnatus
ENSCSEG00000008737	POP1	99	44.737	ENSPEMG00000023633	Pop1	100	45.019	Peromyscus_maniculatus_bairdii
ENSCSEG00000008737	POP1	91	43.487	ENSPMAG00000003209	POP1	99	43.487	Petromyzon_marinus
ENSCSEG00000008737	POP1	100	46.045	ENSPCIG00000012216	POP1	100	46.328	Phascolarctos_cinereus
ENSCSEG00000008737	POP1	100	66.902	ENSPFOG00000012490	POP1	100	66.902	Poecilia_formosa
ENSCSEG00000008737	POP1	100	67.003	ENSPLAG00000004646	POP1	100	67.003	Poecilia_latipinna
ENSCSEG00000008737	POP1	100	67.003	ENSPMEG00000019592	POP1	100	67.003	Poecilia_mexicana
ENSCSEG00000008737	POP1	100	66.734	ENSPREG00000020951	POP1	100	66.230	Poecilia_reticulata
ENSCSEG00000008737	POP1	100	45.869	ENSPPYG00000018777	POP1	100	45.584	Pongo_abelii
ENSCSEG00000008737	POP1	100	43.726	ENSPCAG00000016662	POP1	100	43.251	Procavia_capensis
ENSCSEG00000008737	POP1	100	45.472	ENSPCOG00000019420	POP1	100	45.186	Propithecus_coquereli
ENSCSEG00000008737	POP1	100	45.307	ENSPVAG00000014468	POP1	100	45.359	Pteropus_vampyrus
ENSCSEG00000008737	POP1	100	66.263	ENSPNYG00000004476	pop1	100	66.162	Pundamilia_nyererei
ENSCSEG00000008737	POP1	100	54.396	ENSPNAG00000000265	pop1	100	54.300	Pygocentrus_nattereri
ENSCSEG00000008737	POP1	100	43.935	ENSRNOG00000005243	Pop1	100	44.233	Rattus_norvegicus
ENSCSEG00000008737	POP1	100	45.928	ENSRBIG00000007996	POP1	100	45.644	Rhinopithecus_bieti
ENSCSEG00000008737	POP1	100	45.928	ENSRROG00000012334	POP1	100	45.644	Rhinopithecus_roxellana
ENSCSEG00000008737	POP1	99	46.250	ENSSBOG00000020830	POP1	100	46.058	Saimiri_boliviensis_boliviensis
ENSCSEG00000008737	POP1	100	46.887	ENSSHAG00000000296	POP1	100	46.887	Sarcophilus_harrisii
ENSCSEG00000008737	POP1	100	57.157	ENSSFOG00015007429	pop1	99	57.157	Scleropages_formosus
ENSCSEG00000008737	POP1	100	70.081	ENSSMAG00000010467	POP1	100	70.719	Scophthalmus_maximus
ENSCSEG00000008737	POP1	100	76.915	ENSSDUG00000007817	POP1	100	76.915	Seriola_dumerili
ENSCSEG00000008737	POP1	100	76.714	ENSSLDG00000012565	POP1	100	76.714	Seriola_lalandi_dorsalis
ENSCSEG00000008737	POP1	100	44.050	ENSSPUG00000003550	-	100	43.954	Sphenodon_punctatus
ENSCSEG00000008737	POP1	100	67.568	ENSSPAG00000014955	pop1	100	67.100	Stegastes_partitus
ENSCSEG00000008737	POP1	100	45.717	ENSSSCG00000006078	POP1	100	45.813	Sus_scrofa
ENSCSEG00000008737	POP1	93	43.288	ENSTGUG00000012011	-	100	43.392	Taeniopygia_guttata
ENSCSEG00000008737	POP1	100	64.889	ENSTRUG00000010856	pop1	100	64.493	Takifugu_rubripes
ENSCSEG00000008737	POP1	95	66.084	ENSTNIG00000013297	pop1	100	66.084	Tetraodon_nigroviridis
ENSCSEG00000008737	POP1	93	45.361	ENSTBEG00000014214	POP1	97	45.052	Tupaia_belangeri
ENSCSEG00000008737	POP1	100	44.742	ENSTTRG00000016071	POP1	100	44.359	Tursiops_truncatus
ENSCSEG00000008737	POP1	99	46.863	ENSUAMG00000017309	POP1	100	46.516	Ursus_americanus
ENSCSEG00000008737	POP1	100	45.317	ENSUMAG00000016952	POP1	100	45.489	Ursus_maritimus
ENSCSEG00000008737	POP1	86	50.000	ENSVPAG00000008278	POP1	82	50.000	Vicugna_pacos
ENSCSEG00000008737	POP1	100	45.750	ENSVVUG00000010994	POP1	100	45.368	Vulpes_vulpes
ENSCSEG00000008737	POP1	100	59.023	ENSXCOG00000017043	POP1	100	58.425	Xiphophorus_couchianus
ENSCSEG00000008737	POP1	100	66.599	ENSXMAG00000002472	POP1	100	66.093	Xiphophorus_maculatus