EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000008903 (Gene tree)
Gene ID: 103378113
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 708-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3713 bases
Position: chr4:11931613-11935325
Accession: 103378113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	1	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	2	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	3	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	4	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	5	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	6	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	7	8
ENSCSEP00000013832	zf-C2H2	PF00096.26	5.9e-53	8	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	1	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	2	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	3	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	4	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	5	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	6	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	7	8
ENSCSEP00000013838	zf-C2H2	PF00096.26	1.5e-52	8	8
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	1	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	2	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	3	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	4	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	5	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	6	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	7	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	8	9
ENSCSEP00000013857	zf-C2H2	PF00096.26	9.1e-50	9	9
ENSCSEP00000013857	zf-met	PF12874.7	2.7e-17	1	4
ENSCSEP00000013857	zf-met	PF12874.7	2.7e-17	2	4
ENSCSEP00000013857	zf-met	PF12874.7	2.7e-17	3	4
ENSCSEP00000013857	zf-met	PF12874.7	2.7e-17	4	4
ENSCSEP00000013832	zf-met	PF12874.7	1.4e-15	1	3
ENSCSEP00000013832	zf-met	PF12874.7	1.4e-15	2	3
ENSCSEP00000013832	zf-met	PF12874.7	1.4e-15	3	3
ENSCSEP00000013838	zf-met	PF12874.7	3.5e-15	1	3
ENSCSEP00000013838	zf-met	PF12874.7	3.5e-15	2	3
ENSCSEP00000013838	zf-met	PF12874.7	3.5e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000014000	-	2354	XM_008309199	ENSCSEP00000013838	749 (aa)	XP_008307421	UPI0004977B52
ENSCSET00000013994	-	2907	XM_017032182	ENSCSEP00000013832	707 (aa)	XP_016887671	UPI0007DC965D
ENSCSET00000014019	-	1776	-	ENSCSEP00000013857	591 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000008903's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000008903	-	72	37.324	ENSCSEG00000008596	scrt1b	56	38.636
ENSCSEG00000008903	-	88	38.187	ENSCSEG00000013398	-	90	39.662
ENSCSEG00000008903	-	84	38.947	ENSCSEG00000000356	znf648	99	38.947
ENSCSEG00000008903	-	84	48.529	ENSCSEG00000019047	-	86	48.529
ENSCSEG00000008903	-	78	35.780	ENSCSEG00000018497	-	55	36.455
ENSCSEG00000008903	-	83	38.739	ENSCSEG00000001771	-	63	38.739
ENSCSEG00000008903	-	83	39.286	ENSCSEG00000011586	znf236	88	36.979
ENSCSEG00000008903	-	91	39.914	ENSCSEG00000020730	-	87	39.914
ENSCSEG00000008903	-	83	42.500	ENSCSEG00000008525	-	50	42.500
ENSCSEG00000008903	-	77	36.066	ENSCSEG00000010311	snai2	54	35.507
ENSCSEG00000008903	-	87	31.915	ENSCSEG00000013879	znf319b	95	31.890
ENSCSEG00000008903	-	77	37.333	ENSCSEG00000010264	-	79	37.333
ENSCSEG00000008903	-	80	41.818	ENSCSEG00000005456	si:ch211-79k12.2	52	40.909
ENSCSEG00000008903	-	92	35.431	ENSCSEG00000004348	-	82	36.277
ENSCSEG00000008903	-	83	35.270	ENSCSEG00000014637	-	96	35.270
ENSCSEG00000008903	-	85	38.017	ENSCSEG00000018535	-	83	38.017
ENSCSEG00000008903	-	89	38.760	ENSCSEG00000020696	-	96	40.217
ENSCSEG00000008903	-	84	36.861	ENSCSEG00000008502	-	71	37.879
ENSCSEG00000008903	-	91	42.254	ENSCSEG00000004210	-	98	37.176
ENSCSEG00000008903	-	85	30.702	ENSCSEG00000012389	znf646	84	33.333
ENSCSEG00000008903	-	81	38.095	ENSCSEG00000019979	prdm5	72	39.394
ENSCSEG00000008903	-	83	35.616	ENSCSEG00000001748	-	97	43.919
ENSCSEG00000008903	-	93	39.487	ENSCSEG00000004265	-	65	37.073
ENSCSEG00000008903	-	84	40.397	ENSCSEG00000001315	gfi1b	62	40.397
ENSCSEG00000008903	-	61	38.636	ENSCSEG00000019599	-	82	38.636
ENSCSEG00000008903	-	85	38.323	ENSCSEG00000010423	-	61	38.323
ENSCSEG00000008903	-	81	41.333	ENSCSEG00000019134	znf384l	51	38.356
ENSCSEG00000008903	-	77	35.000	ENSCSEG00000021022	-	66	35.065
ENSCSEG00000008903	-	94	36.534	ENSCSEG00000004273	-	94	35.506
ENSCSEG00000008903	-	73	51.250	ENSCSEG00000015593	-	75	51.250
ENSCSEG00000008903	-	72	38.636	ENSCSEG00000014892	-	67	38.636
ENSCSEG00000008903	-	97	37.849	ENSCSEG00000005974	-	87	44.884
ENSCSEG00000008903	-	87	31.606	ENSCSEG00000005491	-	88	32.653
ENSCSEG00000008903	-	81	41.322	ENSCSEG00000008539	-	72	41.322
ENSCSEG00000008903	-	83	40.260	ENSCSEG00000019182	-	50	45.000
ENSCSEG00000008903	-	72	38.636	ENSCSEG00000021542	scrt2	54	38.636
ENSCSEG00000008903	-	80	39.574	ENSCSEG00000018829	-	65	40.000
ENSCSEG00000008903	-	86	36.522	ENSCSEG00000019029	-	98	36.531
ENSCSEG00000008903	-	80	36.905	ENSCSEG00000001168	-	83	40.541
ENSCSEG00000008903	-	78	35.052	ENSCSEG00000005935	ZNF319	86	33.811
ENSCSEG00000008903	-	90	40.909	ENSCSEG00000019848	-	58	43.373
ENSCSEG00000008903	-	86	36.667	ENSCSEG00000003757	-	99	37.154
ENSCSEG00000008903	-	81	40.260	ENSCSEG00000015852	e4f1	71	40.123
ENSCSEG00000008903	-	87	41.525	ENSCSEG00000018815	-	87	39.855
ENSCSEG00000008903	-	78	43.558	ENSCSEG00000010453	-	57	45.513
ENSCSEG00000008903	-	78	38.462	ENSCSEG00000017606	zbtb47b	69	41.104
ENSCSEG00000008903	-	78	46.512	ENSCSEG00000007055	-	99	46.512
ENSCSEG00000008903	-	85	38.286	ENSCSEG00000018822	-	90	38.947
ENSCSEG00000008903	-	79	38.095	ENSCSEG00000009915	-	56	38.095
ENSCSEG00000008903	-	79	40.580	ENSCSEG00000008510	-	59	40.580
ENSCSEG00000008903	-	88	36.676	ENSCSEG00000005983	-	93	37.634
ENSCSEG00000008903	-	78	35.036	ENSCSEG00000015585	-	82	36.527
ENSCSEG00000008903	-	78	38.290	ENSCSEG00000004721	-	69	36.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000008903	-	96	64.007	ENSAPOG00000001563	-	99	64.007	Acanthochromis_polyacanthus
ENSCSEG00000008903	-	93	47.582	ENSACIG00000015411	-	88	64.242	Amphilophus_citrinellus
ENSCSEG00000008903	-	82	81.933	ENSAOCG00000013505	-	99	55.110	Amphiprion_ocellaris
ENSCSEG00000008903	-	90	73.585	ENSAOCG00000013589	-	95	73.750	Amphiprion_ocellaris
ENSCSEG00000008903	-	83	72.727	ENSAPEG00000022774	-	95	73.009	Amphiprion_percula
ENSCSEG00000008903	-	82	81.933	ENSAPEG00000022756	-	99	55.870	Amphiprion_percula
ENSCSEG00000008903	-	83	82.609	ENSATEG00000019261	-	83	80.690	Anabas_testudineus
ENSCSEG00000008903	-	90	75.636	ENSATEG00000019284	-	93	58.135	Anabas_testudineus
ENSCSEG00000008903	-	87	74.534	ENSACLG00000008606	-	94	78.033	Astatotilapia_calliptera
ENSCSEG00000008903	-	84	75.658	ENSACLG00000008624	-	90	71.498	Astatotilapia_calliptera
ENSCSEG00000008903	-	97	68.454	ENSCVAG00000016534	-	68	68.454	Cyprinodon_variegatus
ENSCSEG00000008903	-	85	57.310	ENSGMOG00000000494	-	99	60.221	Gadus_morhua
ENSCSEG00000008903	-	99	59.586	ENSGAFG00000002659	-	99	54.738	Gambusia_affinis
ENSCSEG00000008903	-	83	75.109	ENSGACG00000001377	-	92	76.695	Gasterosteus_aculeatus
ENSCSEG00000008903	-	83	67.773	ENSHBUG00000008502	-	94	65.283	Haplochromis_burtoni
ENSCSEG00000008903	-	99	58.654	ENSHCOG00000000511	-	92	74.892	Hippocampus_comes
ENSCSEG00000008903	-	99	71.032	ENSLBEG00000018509	-	100	71.858	Labrus_bergylta
ENSCSEG00000008903	-	92	76.411	ENSMAMG00000018137	-	91	77.823	Mastacembelus_armatus
ENSCSEG00000008903	-	83	68.246	ENSMZEG00005002583	-	89	67.717	Maylandia_zebra
ENSCSEG00000008903	-	97	62.376	ENSMMOG00000009733	-	95	66.007	Mola_mola
ENSCSEG00000008903	-	84	56.277	ENSMALG00000019991	-	96	58.371	Monopterus_albus
ENSCSEG00000008903	-	87	78.146	ENSNBRG00000008223	-	79	88.462	Neolamprologus_brichardi
ENSCSEG00000008903	-	84	76.586	ENSONIG00000017233	-	99	77.941	Oreochromis_niloticus
ENSCSEG00000008903	-	97	62.840	ENSOMEG00000016463	-	77	73.222	Oryzias_melastigma
ENSCSEG00000008903	-	79	44.203	ENSPMGG00000002384	-	87	49.880	Periophthalmus_magnuspinnatus
ENSCSEG00000008903	-	99	59.234	ENSPFOG00000006287	-	99	59.336	Poecilia_formosa
ENSCSEG00000008903	-	78	74.089	ENSPLAG00000003412	-	98	50.103	Poecilia_latipinna
ENSCSEG00000008903	-	99	59.371	ENSPMEG00000005897	-	99	57.198	Poecilia_mexicana
ENSCSEG00000008903	-	83	62.284	ENSPREG00000021246	-	97	68.924	Poecilia_reticulata
ENSCSEG00000008903	-	96	60.556	ENSPNYG00000023088	-	94	65.660	Pundamilia_nyererei
ENSCSEG00000008903	-	92	74.397	ENSSDUG00000004892	-	100	64.338	Seriola_dumerili
ENSCSEG00000008903	-	85	78.602	ENSSLDG00000005670	-	90	79.085	Seriola_lalandi_dorsalis
ENSCSEG00000008903	-	83	72.619	ENSSPAG00000022219	-	87	72.619	Stegastes_partitus
ENSCSEG00000008903	-	83	73.638	ENSTNIG00000011188	-	99	74.792	Tetraodon_nigroviridis
ENSCSEG00000008903	-	90	69.421	ENSXCOG00000012645	-	62	69.421	Xiphophorus_couchianus
ENSCSEG00000008903	-	99	59.560	ENSXMAG00000000866	-	83	59.229	Xiphophorus_maculatus