EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009058 (Gene tree)
Gene ID: 103388658
Gene Symbol: sall3a
Alias: sall3
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13103 bases
Position: chr13:13394697-13407799
Accession: 103388658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000014085	zf-C2H2	PF00096.26	5.3e-24	1	5
ENSCSEP00000014085	zf-C2H2	PF00096.26	5.3e-24	2	5
ENSCSEP00000014085	zf-C2H2	PF00096.26	5.3e-24	3	5
ENSCSEP00000014085	zf-C2H2	PF00096.26	5.3e-24	4	5
ENSCSEP00000014085	zf-C2H2	PF00096.26	5.3e-24	5	5
ENSCSEP00000014081	zf-C2H2	PF00096.26	6.2e-24	1	5
ENSCSEP00000014081	zf-C2H2	PF00096.26	6.2e-24	2	5
ENSCSEP00000014081	zf-C2H2	PF00096.26	6.2e-24	3	5
ENSCSEP00000014081	zf-C2H2	PF00096.26	6.2e-24	4	5
ENSCSEP00000014081	zf-C2H2	PF00096.26	6.2e-24	5	5
ENSCSEP00000014085	zf-met	PF12874.7	1.9e-13	1	1
ENSCSEP00000014081	zf-met	PF12874.7	2.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000014246	-	5334	XM_008323743	ENSCSEP00000014081	1357 (aa)	XP_008321965	UPI00049856D5
ENSCSET00000014250	-	5268	XM_008323744	ENSCSEP00000014085	1335 (aa)	XP_008321966	UPI000496FD9A

Gene Model

Click here to download ENSCSEG00000009058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009058	sall3a	64	55.224	ENSCSEG00000014604	sall4	88	65.306
ENSCSEG00000009058	sall3a	80	57.143	ENSCSEG00000009569	sall3b	97	57.143
ENSCSEG00000009058	sall3a	95	65.306	ENSCSEG00000009349	sall1a	70	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009058	sall3a	75	68.235	ENSG00000256463	SALL3	100	67.351	Homo_sapiens
ENSCSEG00000009058	sall3a	98	88.552	ENSAPOG00000020922	sall3a	98	88.275	Acanthochromis_polyacanthus
ENSCSEG00000009058	sall3a	100	51.582	ENSAPOG00000004264	sall3b	70	56.884	Acanthochromis_polyacanthus
ENSCSEG00000009058	sall3a	70	62.948	ENSAMEG00000010206	SALL3	78	61.853	Ailuropoda_melanoleuca
ENSCSEG00000009058	sall3a	76	59.378	ENSACIG00000019407	sall3b	99	58.824	Amphilophus_citrinellus
ENSCSEG00000009058	sall3a	83	88.683	ENSACIG00000014041	sall3a	99	88.683	Amphilophus_citrinellus
ENSCSEG00000009058	sall3a	98	87.706	ENSAOCG00000010863	sall3a	96	89.434	Amphiprion_ocellaris
ENSCSEG00000009058	sall3a	100	91.011	ENSAPEG00000019278	sall3a	100	91.011	Amphiprion_percula
ENSCSEG00000009058	sall3a	100	53.767	ENSATEG00000004914	sall3b	70	57.508	Anabas_testudineus
ENSCSEG00000009058	sall3a	100	90.269	ENSATEG00000024524	sall3a	98	94.872	Anabas_testudineus
ENSCSEG00000009058	sall3a	98	62.632	ENSAPLG00000013214	SALL3	99	62.859	Anas_platyrhynchos
ENSCSEG00000009058	sall3a	100	62.084	ENSACAG00000000478	SALL3	100	62.602	Anolis_carolinensis
ENSCSEG00000009058	sall3a	90	62.488	ENSANAG00000032412	SALL3	91	63.039	Aotus_nancymaae
ENSCSEG00000009058	sall3a	100	89.820	ENSACLG00000022451	sall3a	100	89.820	Astatotilapia_calliptera
ENSCSEG00000009058	sall3a	69	58.387	ENSACLG00000001619	sall3b	69	58.906	Astatotilapia_calliptera
ENSCSEG00000009058	sall3a	75	54.063	ENSAMXG00000035442	sall3b	58	63.860	Astyanax_mexicanus
ENSCSEG00000009058	sall3a	100	74.294	ENSAMXG00000011185	sall3a	98	87.097	Astyanax_mexicanus
ENSCSEG00000009058	sall3a	74	74.118	ENSBTAG00000050200	SALL3	99	67.416	Bos_taurus
ENSCSEG00000009058	sall3a	70	66.561	ENSCJAG00000007332	SALL3	73	66.175	Callithrix_jacchus
ENSCSEG00000009058	sall3a	71	68.130	ENSCAFG00000000013	SALL3	80	68.177	Canis_familiaris
ENSCSEG00000009058	sall3a	71	63.609	ENSCAFG00020015092	SALL3	81	63.618	Canis_lupus_dingo
ENSCSEG00000009058	sall3a	70	74.510	ENSCHIG00000000145	SALL3	74	74.510	Capra_hircus
ENSCSEG00000009058	sall3a	72	65.727	ENSTSYG00000028846	SALL3	99	66.269	Carlito_syrichta
ENSCSEG00000009058	sall3a	81	77.165	ENSCAPG00000006496	SALL3	92	77.215	Cavia_aperea
ENSCSEG00000009058	sall3a	71	66.459	ENSCPOG00000008546	SALL3	74	67.545	Cavia_porcellus
ENSCSEG00000009058	sall3a	71	66.423	ENSCCAG00000034863	SALL3	73	66.807	Cebus_capucinus
ENSCSEG00000009058	sall3a	76	64.000	ENSCATG00000029727	SALL3	100	64.541	Cercocebus_atys
ENSCSEG00000009058	sall3a	70	63.380	ENSCSAG00000018244	SALL3	74	62.926	Chlorocebus_sabaeus
ENSCSEG00000009058	sall3a	62	71.937	ENSCHOG00000013939	-	91	71.937	Choloepus_hoffmanni
ENSCSEG00000009058	sall3a	99	79.921	ENSCPBG00000003657	SALL3	99	79.921	Chrysemys_picta_bellii
ENSCSEG00000009058	sall3a	73	69.091	ENSCANG00000030302	SALL3	99	69.091	Colobus_angolensis_palliatus
ENSCSEG00000009058	sall3a	100	75.655	ENSCGRG00001018203	Sall3	100	61.197	Cricetulus_griseus_chok1gshd
ENSCSEG00000009058	sall3a	98	60.666	ENSCGRG00000017127	Sall3	99	60.922	Cricetulus_griseus_crigri
ENSCSEG00000009058	sall3a	84	87.269	ENSCVAG00000009684	sall3a	99	86.942	Cyprinodon_variegatus
ENSCSEG00000009058	sall3a	73	51.241	ENSCVAG00000017005	sall3b	91	71.765	Cyprinodon_variegatus
ENSCSEG00000009058	sall3a	100	51.808	ENSDARG00000057586	sall3b	70	57.375	Danio_rerio
ENSCSEG00000009058	sall3a	100	67.286	ENSDARG00000079613	sall3a	70	72.545	Danio_rerio
ENSCSEG00000009058	sall3a	70	60.682	ENSDNOG00000025483	SALL3	96	60.652	Dasypus_novemcinctus
ENSCSEG00000009058	sall3a	69	60.366	ENSDORG00000002702	Sall3	89	60.102	Dipodomys_ordii
ENSCSEG00000009058	sall3a	72	59.104	ENSETEG00000001481	SALL3	95	59.980	Echinops_telfairi
ENSCSEG00000009058	sall3a	100	60.398	ENSEASG00005002071	SALL3	100	61.391	Equus_asinus_asinus
ENSCSEG00000009058	sall3a	100	60.236	ENSECAG00000015414	SALL3	100	61.538	Equus_caballus
ENSCSEG00000009058	sall3a	100	76.410	ENSELUG00000020351	sall3a	100	76.246	Esox_lucius
ENSCSEG00000009058	sall3a	100	52.731	ENSELUG00000009541	sall3b	69	57.867	Esox_lucius
ENSCSEG00000009058	sall3a	99	74.800	ENSFCAG00000028839	SALL3	73	74.800	Felis_catus
ENSCSEG00000009058	sall3a	100	63.267	ENSFALG00000013343	SALL3	100	62.916	Ficedula_albicollis
ENSCSEG00000009058	sall3a	72	66.010	ENSFDAG00000014697	SALL3	73	66.561	Fukomys_damarensis
ENSCSEG00000009058	sall3a	98	78.436	ENSGMOG00000006649	sall3a	100	77.938	Gadus_morhua
ENSCSEG00000009058	sall3a	100	61.155	ENSGALG00000041404	SALL3	100	61.833	Gallus_gallus
ENSCSEG00000009058	sall3a	98	83.370	ENSGAFG00000001581	sall3a	97	91.549	Gambusia_affinis
ENSCSEG00000009058	sall3a	68	48.908	ENSGAFG00000014435	-	80	61.538	Gambusia_affinis
ENSCSEG00000009058	sall3a	100	49.483	ENSGACG00000002533	sall3b	73	52.357	Gasterosteus_aculeatus
ENSCSEG00000009058	sall3a	98	79.209	ENSGACG00000005503	sall3a	100	78.944	Gasterosteus_aculeatus
ENSCSEG00000009058	sall3a	100	63.045	ENSGAGG00000000925	SALL3	100	63.064	Gopherus_agassizii
ENSCSEG00000009058	sall3a	75	66.292	ENSGGOG00000008127	SALL3	100	66.292	Gorilla_gorilla
ENSCSEG00000009058	sall3a	100	89.746	ENSHBUG00000004486	sall3a	100	89.746	Haplochromis_burtoni
ENSCSEG00000009058	sall3a	75	58.647	ENSHBUG00000018127	sall3b	99	59.184	Haplochromis_burtoni
ENSCSEG00000009058	sall3a	88	67.123	ENSHGLG00100008694	SALL3	93	67.334	Heterocephalus_glaber_male
ENSCSEG00000009058	sall3a	95	88.506	ENSHCOG00000010423	sall3a	100	89.272	Hippocampus_comes
ENSCSEG00000009058	sall3a	90	61.538	ENSHCOG00000004745	sall3b	61	78.652	Hippocampus_comes
ENSCSEG00000009058	sall3a	100	73.239	ENSIPUG00000003378	sall3	70	77.848	Ictalurus_punctatus
ENSCSEG00000009058	sall3a	100	47.810	ENSIPUG00000003006	sall3b	58	65.306	Ictalurus_punctatus
ENSCSEG00000009058	sall3a	99	60.133	ENSSTOG00000004145	SALL3	73	67.650	Ictidomys_tridecemlineatus
ENSCSEG00000009058	sall3a	99	78.346	ENSJJAG00000014351	Sall3	74	62.238	Jaculus_jaculus
ENSCSEG00000009058	sall3a	100	88.914	ENSKMAG00000003846	sall3a	99	90.164	Kryptolebias_marmoratus
ENSCSEG00000009058	sall3a	100	89.446	ENSLBEG00000005152	sall3a	100	89.446	Labrus_bergylta
ENSCSEG00000009058	sall3a	77	58.602	ENSLBEG00000015706	sall3b	100	57.527	Labrus_bergylta
ENSCSEG00000009058	sall3a	100	70.214	ENSLOCG00000007831	sall3a	70	76.915	Lepisosteus_oculatus
ENSCSEG00000009058	sall3a	98	58.086	ENSLAFG00000013521	SALL3	99	59.114	Loxodonta_africana
ENSCSEG00000009058	sall3a	69	76.772	ENSMFAG00000031402	SALL3	96	64.432	Macaca_fascicularis
ENSCSEG00000009058	sall3a	77	63.581	ENSMMUG00000000286	SALL3	73	66.913	Macaca_mulatta
ENSCSEG00000009058	sall3a	62	76.772	ENSMNEG00000029916	SALL3	75	62.826	Macaca_nemestrina
ENSCSEG00000009058	sall3a	98	73.167	ENSMAMG00000001276	sall3a	98	84.306	Mastacembelus_armatus
ENSCSEG00000009058	sall3a	77	57.479	ENSMAMG00000006101	sall3b	100	55.367	Mastacembelus_armatus
ENSCSEG00000009058	sall3a	100	89.820	ENSMZEG00005007586	sall3a	100	89.820	Maylandia_zebra
ENSCSEG00000009058	sall3a	69	58.495	ENSMZEG00005026224	sall3b	69	59.013	Maylandia_zebra
ENSCSEG00000009058	sall3a	100	62.676	ENSMGAG00000002297	SALL3	100	63.146	Meleagris_gallopavo
ENSCSEG00000009058	sall3a	100	60.487	ENSMAUG00000011828	Sall3	100	60.754	Mesocricetus_auratus
ENSCSEG00000009058	sall3a	76	77.075	ENSMICG00000017395	SALL3	92	77.075	Microcebus_murinus
ENSCSEG00000009058	sall3a	100	60.472	ENSMOCG00000013205	Sall3	73	68.632	Microtus_ochrogaster
ENSCSEG00000009058	sall3a	83	87.051	ENSMMOG00000003253	sall3a	99	88.235	Mola_mola
ENSCSEG00000009058	sall3a	75	57.204	ENSMMOG00000014246	sall3b	99	55.864	Mola_mola
ENSCSEG00000009058	sall3a	100	62.324	ENSMODG00000012231	SALL3	72	69.652	Monodelphis_domestica
ENSCSEG00000009058	sall3a	68	57.081	ENSMALG00000015200	sall3b	68	54.904	Monopterus_albus
ENSCSEG00000009058	sall3a	97	88.598	ENSMALG00000003343	sall3a	99	88.521	Monopterus_albus
ENSCSEG00000009058	sall3a	100	61.152	MGP_CAROLIEiJ_G0022442	Sall3	100	61.641	Mus_caroli
ENSCSEG00000009058	sall3a	100	61.004	ENSMUSG00000024565	Sall3	100	61.493	Mus_musculus
ENSCSEG00000009058	sall3a	100	61.004	MGP_PahariEiJ_G0019170	Sall3	100	61.345	Mus_pahari
ENSCSEG00000009058	sall3a	100	61.209	MGP_SPRETEiJ_G0023357	Sall3	100	61.283	Mus_spretus
ENSCSEG00000009058	sall3a	83	62.600	ENSMPUG00000016646	SALL3	97	61.552	Mustela_putorius_furo
ENSCSEG00000009058	sall3a	98	56.318	ENSMLUG00000010582	SALL3	99	76.000	Myotis_lucifugus
ENSCSEG00000009058	sall3a	99	79.134	ENSNGAG00000023772	Sall3	73	68.316	Nannospalax_galili
ENSCSEG00000009058	sall3a	97	86.657	ENSNBRG00000008974	sall3a	100	86.657	Neolamprologus_brichardi
ENSCSEG00000009058	sall3a	77	58.906	ENSNBRG00000016034	sall3b	99	59.227	Neolamprologus_brichardi
ENSCSEG00000009058	sall3a	76	67.061	ENSNLEG00000008217	SALL3	100	66.919	Nomascus_leucogenys
ENSCSEG00000009058	sall3a	68	77.559	ENSODEG00000002692	SALL3	74	77.559	Octodon_degus
ENSCSEG00000009058	sall3a	100	81.150	ENSONIG00000007305	sall3a	100	80.786	Oreochromis_niloticus
ENSCSEG00000009058	sall3a	68	58.613	ENSONIG00000013791	sall3b	100	52.056	Oreochromis_niloticus
ENSCSEG00000009058	sall3a	90	58.974	ENSOCUG00000004364	-	78	76.836	Oryctolagus_cuniculus
ENSCSEG00000009058	sall3a	100	85.778	ENSORLG00000020718	sall3a	100	85.778	Oryzias_latipes
ENSCSEG00000009058	sall3a	60	81.481	ENSORLG00000024765	-	54	81.481	Oryzias_latipes
ENSCSEG00000009058	sall3a	93	61.538	ENSORLG00020015105	sall3b	65	63.265	Oryzias_latipes_hni
ENSCSEG00000009058	sall3a	98	83.523	ENSORLG00020001794	sall3a	100	83.827	Oryzias_latipes_hni
ENSCSEG00000009058	sall3a	83	63.265	ENSORLG00015005877	sall3b	83	63.265	Oryzias_latipes_hsok
ENSCSEG00000009058	sall3a	98	83.435	ENSORLG00015018152	sall3a	99	87.473	Oryzias_latipes_hsok
ENSCSEG00000009058	sall3a	100	86.217	ENSOMEG00000011390	sall3a	100	86.217	Oryzias_melastigma
ENSCSEG00000009058	sall3a	69	63.265	ENSOGAG00000031681	SALL3	73	63.469	Otolemur_garnettii
ENSCSEG00000009058	sall3a	76	71.595	ENSOARG00000004353	SALL3	75	71.595	Ovis_aries
ENSCSEG00000009058	sall3a	73	70.492	ENSPPAG00000029586	-	98	70.492	Pan_paniscus
ENSCSEG00000009058	sall3a	76	65.414	ENSPTRG00000010126	SALL3	100	66.292	Pan_troglodytes
ENSCSEG00000009058	sall3a	74	63.784	ENSPANG00000006485	SALL3	100	64.324	Papio_anubis
ENSCSEG00000009058	sall3a	98	85.315	ENSPKIG00000013427	sall3a	100	85.315	Paramormyrops_kingsleyae
ENSCSEG00000009058	sall3a	98	59.882	ENSPKIG00000018271	SALL3	97	72.549	Paramormyrops_kingsleyae
ENSCSEG00000009058	sall3a	98	63.142	ENSPSIG00000008556	SALL3	99	63.993	Pelodiscus_sinensis
ENSCSEG00000009058	sall3a	99	82.340	ENSPMGG00000017042	sall3a	99	81.614	Periophthalmus_magnuspinnatus
ENSCSEG00000009058	sall3a	74	52.298	ENSPMGG00000002913	sall3b	98	51.419	Periophthalmus_magnuspinnatus
ENSCSEG00000009058	sall3a	100	75.655	ENSPEMG00000022799	Sall3	74	63.247	Peromyscus_maniculatus_bairdii
ENSCSEG00000009058	sall3a	99	79.134	ENSPCIG00000002472	SALL3	99	79.134	Phascolarctos_cinereus
ENSCSEG00000009058	sall3a	100	87.537	ENSPFOG00000019127	sall3a	100	87.612	Poecilia_formosa
ENSCSEG00000009058	sall3a	100	87.463	ENSPLAG00000018123	sall3a	99	90.000	Poecilia_latipinna
ENSCSEG00000009058	sall3a	89	87.062	ENSPMEG00000014946	sall3a	95	87.229	Poecilia_mexicana
ENSCSEG00000009058	sall3a	76	47.732	ENSPMEG00000023703	sall3b	51	85.000	Poecilia_mexicana
ENSCSEG00000009058	sall3a	89	86.739	ENSPREG00000014420	sall3a	95	86.739	Poecilia_reticulata
ENSCSEG00000009058	sall3a	69	48.925	ENSPREG00000015079	sall3b	71	48.504	Poecilia_reticulata
ENSCSEG00000009058	sall3a	70	67.619	ENSPPYG00000009253	SALL3	75	66.913	Pongo_abelii
ENSCSEG00000009058	sall3a	98	58.759	ENSPCAG00000006522	SALL3	99	58.819	Procavia_capensis
ENSCSEG00000009058	sall3a	76	77.075	ENSPCOG00000012553	SALL3	99	66.883	Propithecus_coquereli
ENSCSEG00000009058	sall3a	97	65.217	ENSPVAG00000014645	SALL3	99	49.165	Pteropus_vampyrus
ENSCSEG00000009058	sall3a	77	58.754	ENSPNYG00000005353	sall3b	99	59.076	Pundamilia_nyererei
ENSCSEG00000009058	sall3a	97	86.581	ENSPNYG00000012783	sall3a	100	86.581	Pundamilia_nyererei
ENSCSEG00000009058	sall3a	100	50.146	ENSPNAG00000017141	sall3b	100	49.488	Pygocentrus_nattereri
ENSCSEG00000009058	sall3a	86	55.186	ENSRNOG00000026116	Sall3	97	58.717	Rattus_norvegicus
ENSCSEG00000009058	sall3a	71	67.259	ENSRBIG00000036190	SALL3	74	66.702	Rhinopithecus_bieti
ENSCSEG00000009058	sall3a	75	67.330	ENSRROG00000034130	SALL3	98	66.807	Rhinopithecus_roxellana
ENSCSEG00000009058	sall3a	72	67.206	ENSSBOG00000023380	SALL3	100	66.629	Saimiri_boliviensis_boliviensis
ENSCSEG00000009058	sall3a	100	62.546	ENSSHAG00000015872	SALL3	100	62.916	Sarcophilus_harrisii
ENSCSEG00000009058	sall3a	97	69.148	ENSSFOG00015012223	sall3a	99	90.476	Scleropages_formosus
ENSCSEG00000009058	sall3a	99	56.978	ENSSFOG00015009159	SALL3	99	67.573	Scleropages_formosus
ENSCSEG00000009058	sall3a	100	52.212	ENSSMAG00000019762	sall3b	70	58.013	Scophthalmus_maximus
ENSCSEG00000009058	sall3a	100	90.299	ENSSMAG00000007674	sall3a	100	90.299	Scophthalmus_maximus
ENSCSEG00000009058	sall3a	100	87.369	ENSSDUG00000011099	sall3a	100	86.697	Seriola_dumerili
ENSCSEG00000009058	sall3a	75	60.064	ENSSDUG00000010584	sall3b	99	57.794	Seriola_dumerili
ENSCSEG00000009058	sall3a	100	52.975	ENSSLDG00000016800	sall3b	70	58.023	Seriola_lalandi_dorsalis
ENSCSEG00000009058	sall3a	100	87.369	ENSSLDG00000012706	sall3a	100	86.697	Seriola_lalandi_dorsalis
ENSCSEG00000009058	sall3a	75	58.370	ENSSPAG00000003172	sall3b	100	57.020	Stegastes_partitus
ENSCSEG00000009058	sall3a	94	93.976	ENSSPAG00000013114	sall3a	99	89.552	Stegastes_partitus
ENSCSEG00000009058	sall3a	99	74.000	ENSSSCG00000004858	SALL3	100	74.000	Sus_scrofa
ENSCSEG00000009058	sall3a	98	60.617	ENSTGUG00000006541	SALL3	71	66.595	Taeniopygia_guttata
ENSCSEG00000009058	sall3a	72	92.857	ENSTRUG00000017423	sall3a	99	92.857	Takifugu_rubripes
ENSCSEG00000009058	sall3a	61	62.745	ENSTBEG00000008964	SALL3	55	62.745	Tupaia_belangeri
ENSCSEG00000009058	sall3a	77	60.661	ENSTTRG00000004958	SALL3	89	59.095	Tursiops_truncatus
ENSCSEG00000009058	sall3a	100	56.476	ENSUAMG00000016908	SALL3	99	69.663	Ursus_americanus
ENSCSEG00000009058	sall3a	70	85.714	ENSVVUG00000018838	SALL3	99	80.645	Vulpes_vulpes
ENSCSEG00000009058	sall3a	100	61.127	ENSXETG00000000845	sall3	72	69.684	Xenopus_tropicalis
ENSCSEG00000009058	sall3a	98	79.375	ENSXCOG00000016907	sall3a	95	86.940	Xiphophorus_couchianus
ENSCSEG00000009058	sall3a	64	66.667	ENSXCOG00000018799	sall3b	92	50.863	Xiphophorus_couchianus
ENSCSEG00000009058	sall3a	90	56.452	ENSXMAG00000000798	sall3b	97	50.634	Xiphophorus_maculatus
ENSCSEG00000009058	sall3a	100	86.950	ENSXMAG00000023447	sall3a	100	87.025	Xiphophorus_maculatus