EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009209 (Gene tree)
Gene ID: 103379044
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 58556 bases
Position: chr5:10762315-10820870
Accession: 103379044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000014472	ResIII	PF04851.15	3.1e-06	1	1
ENSCSEP00000014397	ResIII	PF04851.15	3.1e-06	1	1
ENSCSEP00000014472	BRK	PF07533.16	1.5e-30	1	2
ENSCSEP00000014472	BRK	PF07533.16	1.5e-30	2	2
ENSCSEP00000014397	BRK	PF07533.16	2.5e-30	1	2
ENSCSEP00000014397	BRK	PF07533.16	2.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000014642	-	7395	XM_017032514	ENSCSEP00000014472	2464 (aa)	-	-
ENSCSET00000014567	-	14289	XM_008310455	ENSCSEP00000014397	3089 (aa)	XP_008308677	-

Gene Model

Click here to download ENSCSEG00000009209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009209	chd9	87	63.887	ENSCSEG00000017886	chd7	85	65.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009209	chd9	99	66.083	ENSG00000177200	CHD9	97	67.167	Homo_sapiens
ENSCSEG00000009209	chd9	99	85.335	ENSAPOG00000023034	chd9	99	86.704	Acanthochromis_polyacanthus
ENSCSEG00000009209	chd9	67	72.619	ENSAMEG00000016232	CHD9	79	68.461	Ailuropoda_melanoleuca
ENSCSEG00000009209	chd9	97	80.066	ENSACIG00000004097	chd9	99	78.107	Amphilophus_citrinellus
ENSCSEG00000009209	chd9	99	85.697	ENSAOCG00000005487	chd9	99	86.824	Amphiprion_ocellaris
ENSCSEG00000009209	chd9	99	85.496	ENSAPEG00000009859	chd9	99	86.864	Amphiprion_percula
ENSCSEG00000009209	chd9	99	85.553	ENSATEG00000002748	chd9	99	81.908	Anabas_testudineus
ENSCSEG00000009209	chd9	98	68.092	ENSAPLG00000002826	CHD9	80	69.880	Anas_platyrhynchos
ENSCSEG00000009209	chd9	68	72.446	ENSACAG00000016150	CHD9	78	69.401	Anolis_carolinensis
ENSCSEG00000009209	chd9	67	72.245	ENSANAG00000015630	CHD9	93	68.512	Aotus_nancymaae
ENSCSEG00000009209	chd9	98	81.504	ENSACLG00000016899	chd9	94	79.736	Astatotilapia_calliptera
ENSCSEG00000009209	chd9	99	73.747	ENSAMXG00000005652	chd9	99	74.576	Astyanax_mexicanus
ENSCSEG00000009209	chd9	67	72.245	ENSBTAG00000002287	CHD9	79	68.176	Bos_taurus
ENSCSEG00000009209	chd9	98	58.569	ENSCJAG00000001573	CHD9	93	68.858	Callithrix_jacchus
ENSCSEG00000009209	chd9	67	72.543	ENSCAFG00000009699	CHD9	84	68.768	Canis_familiaris
ENSCSEG00000009209	chd9	67	72.543	ENSCAFG00020002879	CHD9	91	69.550	Canis_lupus_dingo
ENSCSEG00000009209	chd9	67	72.285	ENSTSYG00000007693	CHD9	92	69.204	Carlito_syrichta
ENSCSEG00000009209	chd9	72	59.060	ENSCAPG00000011604	CHD9	59	61.898	Cavia_aperea
ENSCSEG00000009209	chd9	67	67.976	ENSCPOG00000036544	CHD9	84	64.577	Cavia_porcellus
ENSCSEG00000009209	chd9	67	72.305	ENSCCAG00000036178	CHD9	93	68.512	Cebus_capucinus
ENSCSEG00000009209	chd9	67	72.424	ENSCATG00000036753	CHD9	92	68.259	Cercocebus_atys
ENSCSEG00000009209	chd9	67	72.143	ENSCLAG00000007137	CHD9	95	78.318	Chinchilla_lanigera
ENSCSEG00000009209	chd9	66	73.601	ENSCSAG00000005311	CHD9	84	68.953	Chlorocebus_sabaeus
ENSCSEG00000009209	chd9	67	90.885	ENSCHOG00000003935	CHD9	53	90.838	Choloepus_hoffmanni
ENSCSEG00000009209	chd9	88	80.772	ENSCPBG00000012459	CHD9	83	78.134	Chrysemys_picta_bellii
ENSCSEG00000009209	chd9	67	72.365	ENSCANG00000030349	CHD9	92	68.858	Colobus_angolensis_palliatus
ENSCSEG00000009209	chd9	96	67.131	ENSCGRG00001016150	Chd9	84	68.188	Cricetulus_griseus_chok1gshd
ENSCSEG00000009209	chd9	96	67.131	ENSCGRG00000012850	Chd9	94	79.373	Cricetulus_griseus_crigri
ENSCSEG00000009209	chd9	94	83.799	ENSCVAG00000016195	chd9	97	77.515	Cyprinodon_variegatus
ENSCSEG00000009209	chd9	68	78.077	ENSDARG00000074498	chd9	97	75.368	Danio_rerio
ENSCSEG00000009209	chd9	78	67.714	ENSDNOG00000006045	CHD9	97	68.399	Dasypus_novemcinctus
ENSCSEG00000009209	chd9	51	75.234	ENSDORG00000008523	-	96	69.277	Dipodomys_ordii
ENSCSEG00000009209	chd9	63	91.270	ENSETEG00000009565	CHD9	71	91.270	Echinops_telfairi
ENSCSEG00000009209	chd9	85	75.613	ENSEASG00005014832	CHD9	93	78.990	Equus_asinus_asinus
ENSCSEG00000009209	chd9	67	72.258	ENSECAG00000011505	CHD9	80	68.176	Equus_caballus
ENSCSEG00000009209	chd9	78	84.615	ENSEEUG00000014515	CHD9	68	82.873	Erinaceus_europaeus
ENSCSEG00000009209	chd9	91	76.632	ENSELUG00000006031	chd9	99	75.244	Esox_lucius
ENSCSEG00000009209	chd9	98	58.998	ENSFCAG00000022534	CHD9	92	69.896	Felis_catus
ENSCSEG00000009209	chd9	99	67.557	ENSFALG00000013276	CHD9	97	68.958	Ficedula_albicollis
ENSCSEG00000009209	chd9	67	72.447	ENSFDAG00000021037	CHD9	79	68.681	Fukomys_damarensis
ENSCSEG00000009209	chd9	99	82.806	ENSFHEG00000006068	chd9	99	84.698	Fundulus_heteroclitus
ENSCSEG00000009209	chd9	80	83.751	ENSGMOG00000006040	chd9	83	84.558	Gadus_morhua
ENSCSEG00000009209	chd9	67	73.988	ENSGALG00000039178	CHD9	86	70.399	Gallus_gallus
ENSCSEG00000009209	chd9	99	83.340	ENSGAFG00000010014	chd9	99	85.372	Gambusia_affinis
ENSCSEG00000009209	chd9	67	72.500	ENSGGOG00000014816	CHD9	93	69.204	Gorilla_gorilla
ENSCSEG00000009209	chd9	99	84.006	ENSHBUG00000023322	chd9	99	84.307	Haplochromis_burtoni
ENSCSEG00000009209	chd9	67	72.955	ENSHGLG00000014938	CHD9	94	79.493	Heterocephalus_glaber_female
ENSCSEG00000009209	chd9	96	81.217	ENSHCOG00000000937	chd9	96	82.419	Hippocampus_comes
ENSCSEG00000009209	chd9	99	74.929	ENSIPUG00000016448	chd9	97	75.542	Ictalurus_punctatus
ENSCSEG00000009209	chd9	67	72.361	ENSSTOG00000022273	CHD9	94	79.081	Ictidomys_tridecemlineatus
ENSCSEG00000009209	chd9	51	76.554	ENSJJAG00000015741	-	96	69.578	Jaculus_jaculus
ENSCSEG00000009209	chd9	96	85.401	ENSKMAG00000016784	chd9	99	85.646	Kryptolebias_marmoratus
ENSCSEG00000009209	chd9	99	83.713	ENSLBEG00000012077	chd9	99	85.686	Labrus_bergylta
ENSCSEG00000009209	chd9	97	63.968	ENSLACG00000005557	CHD9	80	64.199	Latimeria_chalumnae
ENSCSEG00000009209	chd9	99	72.941	ENSLOCG00000007225	chd9	97	73.203	Lepisosteus_oculatus
ENSCSEG00000009209	chd9	67	72.169	ENSLAFG00000015374	CHD9	84	68.135	Loxodonta_africana
ENSCSEG00000009209	chd9	76	68.176	ENSMFAG00000041354	CHD9	92	69.935	Macaca_fascicularis
ENSCSEG00000009209	chd9	67	72.424	ENSMMUG00000016310	CHD9	92	68.858	Macaca_mulatta
ENSCSEG00000009209	chd9	67	72.424	ENSMNEG00000031494	CHD9	80	70.928	Macaca_nemestrina
ENSCSEG00000009209	chd9	67	72.424	ENSMLEG00000043219	CHD9	92	68.858	Mandrillus_leucophaeus
ENSCSEG00000009209	chd9	99	85.300	ENSMAMG00000003909	chd9	99	82.347	Mastacembelus_armatus
ENSCSEG00000009209	chd9	99	84.762	ENSMZEG00005006581	chd9	99	86.149	Maylandia_zebra
ENSCSEG00000009209	chd9	98	63.995	ENSMGAG00000004642	CHD9	59	71.204	Meleagris_gallopavo
ENSCSEG00000009209	chd9	67	72.305	ENSMICG00000016679	CHD9	92	69.204	Microcebus_murinus
ENSCSEG00000009209	chd9	97	81.826	ENSMMOG00000016406	chd9	94	77.695	Mola_mola
ENSCSEG00000009209	chd9	86	70.324	ENSMODG00000013142	-	96	75.725	Monodelphis_domestica
ENSCSEG00000009209	chd9	97	83.026	ENSMALG00000013306	chd9	94	80.333	Monopterus_albus
ENSCSEG00000009209	chd9	66	72.286	MGP_CAROLIEiJ_G0031364	Chd9	79	67.768	Mus_caroli
ENSCSEG00000009209	chd9	94	67.824	ENSMUSG00000056608	Chd9	94	78.718	Mus_musculus
ENSCSEG00000009209	chd9	94	66.625	MGP_PahariEiJ_G0022964	Chd9	79	66.694	Mus_pahari
ENSCSEG00000009209	chd9	66	72.226	MGP_SPRETEiJ_G0032483	Chd9	79	67.456	Mus_spretus
ENSCSEG00000009209	chd9	67	72.662	ENSMPUG00000003285	CHD9	80	68.502	Mustela_putorius_furo
ENSCSEG00000009209	chd9	66	73.585	ENSMLUG00000004456	CHD9	78	69.902	Myotis_lucifugus
ENSCSEG00000009209	chd9	99	83.641	ENSNBRG00000009423	chd9	99	85.423	Neolamprologus_brichardi
ENSCSEG00000009209	chd9	67	72.484	ENSNLEG00000001026	CHD9	85	70.801	Nomascus_leucogenys
ENSCSEG00000009209	chd9	75	89.241	ENSMEUG00000008222	-	69	88.608	Notamacropus_eugenii
ENSCSEG00000009209	chd9	64	83.149	ENSOPRG00000011168	CHD9	65	84.270	Ochotona_princeps
ENSCSEG00000009209	chd9	67	71.929	ENSODEG00000004466	CHD9	85	67.942	Octodon_degus
ENSCSEG00000009209	chd9	97	83.668	ENSONIG00000002816	chd9	98	85.104	Oreochromis_niloticus
ENSCSEG00000009209	chd9	67	73.325	ENSOANG00000013401	CHD9	80	69.502	Ornithorhynchus_anatinus
ENSCSEG00000009209	chd9	68	71.454	ENSOCUG00000001016	CHD9	96	66.667	Oryctolagus_cuniculus
ENSCSEG00000009209	chd9	96	83.368	ENSORLG00000013810	chd9	96	82.664	Oryzias_latipes
ENSCSEG00000009209	chd9	95	80.000	ENSORLG00020020665	chd9	97	76.129	Oryzias_latipes_hni
ENSCSEG00000009209	chd9	96	83.689	ENSORLG00015019126	chd9	96	85.065	Oryzias_latipes_hsok
ENSCSEG00000009209	chd9	55	86.662	ENSOMEG00000015978	chd9	99	78.078	Oryzias_melastigma
ENSCSEG00000009209	chd9	98	66.249	ENSOGAG00000002110	CHD9	79	67.912	Otolemur_garnettii
ENSCSEG00000009209	chd9	67	72.117	ENSOARG00000017664	CHD9	79	68.140	Ovis_aries
ENSCSEG00000009209	chd9	79	66.990	ENSPPAG00000039388	-	96	68.347	Pan_paniscus
ENSCSEG00000009209	chd9	98	58.966	ENSPPRG00000004801	CHD9	92	69.550	Panthera_pardus
ENSCSEG00000009209	chd9	98	58.158	ENSPTIG00000021854	CHD9	92	60.554	Panthera_tigris_altaica
ENSCSEG00000009209	chd9	67	72.484	ENSPTRG00000008113	CHD9	93	69.204	Pan_troglodytes
ENSCSEG00000009209	chd9	68	71.512	ENSPANG00000019307	CHD9	97	66.924	Papio_anubis
ENSCSEG00000009209	chd9	95	74.499	ENSPKIG00000021876	chd9	96	75.629	Paramormyrops_kingsleyae
ENSCSEG00000009209	chd9	99	69.681	ENSPKIG00000025401	-	98	62.434	Paramormyrops_kingsleyae
ENSCSEG00000009209	chd9	56	74.514	ENSPSIG00000008099	CHD9	78	77.206	Pelodiscus_sinensis
ENSCSEG00000009209	chd9	86	69.060	ENSPCIG00000017215	CHD9	97	72.183	Phascolarctos_cinereus
ENSCSEG00000009209	chd9	99	82.998	ENSPFOG00000015839	chd9	93	81.323	Poecilia_formosa
ENSCSEG00000009209	chd9	99	84.029	ENSPLAG00000011118	chd9	99	85.572	Poecilia_latipinna
ENSCSEG00000009209	chd9	99	81.225	ENSPMEG00000015106	chd9	99	76.471	Poecilia_mexicana
ENSCSEG00000009209	chd9	96	84.825	ENSPREG00000006473	chd9	96	86.395	Poecilia_reticulata
ENSCSEG00000009209	chd9	67	72.484	ENSPPYG00000007348	CHD9	85	68.538	Pongo_abelii
ENSCSEG00000009209	chd9	71	78.351	ENSPCAG00000007564	CHD9	73	78.731	Procavia_capensis
ENSCSEG00000009209	chd9	67	69.982	ENSPCOG00000028433	CHD9	92	68.858	Propithecus_coquereli
ENSCSEG00000009209	chd9	78	71.965	ENSPVAG00000015617	CHD9	81	71.927	Pteropus_vampyrus
ENSCSEG00000009209	chd9	99	84.643	ENSPNYG00000010947	chd9	99	86.424	Pundamilia_nyererei
ENSCSEG00000009209	chd9	99	75.000	ENSPNAG00000024141	chd9	99	75.771	Pygocentrus_nattereri
ENSCSEG00000009209	chd9	67	69.395	ENSRNOG00000049302	Chd9	76	78.638	Rattus_norvegicus
ENSCSEG00000009209	chd9	67	72.365	ENSRBIG00000035553	CHD9	96	67.998	Rhinopithecus_bieti
ENSCSEG00000009209	chd9	79	67.771	ENSRROG00000033278	CHD9	96	68.647	Rhinopithecus_roxellana
ENSCSEG00000009209	chd9	98	58.846	ENSSBOG00000030240	CHD9	93	68.858	Saimiri_boliviensis_boliviensis
ENSCSEG00000009209	chd9	98	66.333	ENSSHAG00000002719	CHD9	79	68.805	Sarcophilus_harrisii
ENSCSEG00000009209	chd9	99	71.039	ENSSFOG00015001327	chd9	96	72.392	Scleropages_formosus
ENSCSEG00000009209	chd9	96	75.444	ENSSFOG00015020209	chd9	99	74.641	Scleropages_formosus
ENSCSEG00000009209	chd9	96	86.238	ENSSMAG00000008953	chd9	99	87.360	Scophthalmus_maximus
ENSCSEG00000009209	chd9	99	86.761	ENSSDUG00000006139	chd9	99	87.430	Seriola_dumerili
ENSCSEG00000009209	chd9	99	86.511	ENSSLDG00000017818	chd9	99	87.950	Seriola_lalandi_dorsalis
ENSCSEG00000009209	chd9	99	85.468	ENSSPAG00000021649	chd9	99	87.150	Stegastes_partitus
ENSCSEG00000009209	chd9	87	62.001	ENSTGUG00000007476	CHD9	81	72.325	Taeniopygia_guttata
ENSCSEG00000009209	chd9	99	81.855	ENSTRUG00000009125	chd9	99	78.848	Takifugu_rubripes
ENSCSEG00000009209	chd9	67	85.238	ENSTNIG00000003825	chd9	84	98.817	Tetraodon_nigroviridis
ENSCSEG00000009209	chd9	61	94.915	ENSTBEG00000016052	-	59	94.915	Tupaia_belangeri
ENSCSEG00000009209	chd9	82	73.435	ENSTTRG00000012674	CHD9	72	69.374	Tursiops_truncatus
ENSCSEG00000009209	chd9	76	83.054	ENSUMAG00000004043	CHD9	91	84.969	Ursus_maritimus
ENSCSEG00000009209	chd9	69	73.890	ENSVPAG00000001374	CHD9	77	68.644	Vicugna_pacos
ENSCSEG00000009209	chd9	67	72.484	ENSVVUG00000019435	CHD9	84	68.727	Vulpes_vulpes
ENSCSEG00000009209	chd9	94	66.974	ENSXETG00000000349	chd9	78	74.168	Xenopus_tropicalis
ENSCSEG00000009209	chd9	99	83.199	ENSXCOG00000012997	chd9	99	84.812	Xiphophorus_couchianus
ENSCSEG00000009209	chd9	99	83.947	ENSXMAG00000016192	chd9	99	86.198	Xiphophorus_maculatus