EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009349 (Gene tree)
Gene ID: 103379039
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 14963 bases
Position: chr5:11133868-11148830
Accession: 103379039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	1	7
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	2	7
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	3	7
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	4	7
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	5	7
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	6	7
ENSCSEP00000014523	zf-C2H2	PF00096.26	1.1e-34	7	7
ENSCSEP00000014523	zf-met	PF12874.7	1.9e-24	1	5
ENSCSEP00000014523	zf-met	PF12874.7	1.9e-24	2	5
ENSCSEP00000014523	zf-met	PF12874.7	1.9e-24	3	5
ENSCSEP00000014523	zf-met	PF12874.7	1.9e-24	4	5
ENSCSEP00000014523	zf-met	PF12874.7	1.9e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000014697	-	8890	XM_008310452	ENSCSEP00000014523	1310 (aa)	XP_008308674	UPI000495B1DB

Gene Model

Click here to download ENSCSEG00000009349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009349	sall1a	98	57.635	ENSCSEG00000014604	sall4	94	65.385
ENSCSEG00000009349	sall1a	77	59.615	ENSCSEG00000009569	sall3b	99	63.462
ENSCSEG00000009349	sall1a	70	65.306	ENSCSEG00000009058	sall3a	95	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009349	sall1a	100	66.766	ENSG00000103449	SALL1	100	66.642	Homo_sapiens
ENSCSEG00000009349	sall1a	99	90.687	ENSAPOG00000022764	sall1a	99	90.687	Acanthochromis_polyacanthus
ENSCSEG00000009349	sall1a	100	65.522	ENSAMEG00000006817	SALL1	100	65.672	Ailuropoda_melanoleuca
ENSCSEG00000009349	sall1a	99	89.924	ENSACIG00000004231	sall1a	99	89.924	Amphilophus_citrinellus
ENSCSEG00000009349	sall1a	99	90.992	ENSAOCG00000002800	sall1a	99	90.992	Amphiprion_ocellaris
ENSCSEG00000009349	sall1a	99	90.840	ENSAPEG00000010179	sall1a	99	90.840	Amphiprion_percula
ENSCSEG00000009349	sall1a	100	90.618	ENSATEG00000003006	sall1a	100	90.700	Anabas_testudineus
ENSCSEG00000009349	sall1a	99	68.263	ENSAPLG00000003356	SALL1	99	67.964	Anas_platyrhynchos
ENSCSEG00000009349	sall1a	99	66.968	ENSACAG00000014399	SALL1	96	66.566	Anolis_carolinensis
ENSCSEG00000009349	sall1a	100	67.039	ENSANAG00000027238	SALL1	100	67.212	Aotus_nancymaae
ENSCSEG00000009349	sall1a	99	89.847	ENSACLG00000017148	sall1a	99	89.868	Astatotilapia_calliptera
ENSCSEG00000009349	sall1a	99	51.375	ENSAMXG00000017702	sall1b	99	51.212	Astyanax_mexicanus
ENSCSEG00000009349	sall1a	99	79.119	ENSAMXG00000018599	sall1a	99	78.419	Astyanax_mexicanus
ENSCSEG00000009349	sall1a	100	66.295	ENSBTAG00000008544	SALL1	100	66.245	Bos_taurus
ENSCSEG00000009349	sall1a	100	67.411	ENSCJAG00000001740	SALL1	100	67.286	Callithrix_jacchus
ENSCSEG00000009349	sall1a	100	66.145	ENSCAFG00000009755	SALL1	100	66.270	Canis_familiaris
ENSCSEG00000009349	sall1a	100	66.145	ENSCAFG00020002842	SALL1	100	66.270	Canis_lupus_dingo
ENSCSEG00000009349	sall1a	100	66.270	ENSCHIG00000026074	SALL1	100	66.046	Capra_hircus
ENSCSEG00000009349	sall1a	100	67.212	ENSTSYG00000029464	SALL1	100	66.840	Carlito_syrichta
ENSCSEG00000009349	sall1a	97	66.972	ENSCPOG00000006564	SALL1	99	66.489	Cavia_porcellus
ENSCSEG00000009349	sall1a	100	65.030	ENSCCAG00000001639	SALL1	100	65.279	Cebus_capucinus
ENSCSEG00000009349	sall1a	100	67.336	ENSCATG00000004982	SALL1	100	67.014	Cercocebus_atys
ENSCSEG00000009349	sall1a	100	65.975	ENSCLAG00000006380	SALL1	100	65.678	Chinchilla_lanigera
ENSCSEG00000009349	sall1a	100	66.592	ENSCSAG00000005319	SALL1	100	66.320	Chlorocebus_sabaeus
ENSCSEG00000009349	sall1a	63	65.504	ENSCHOG00000000800	-	69	64.479	Choloepus_hoffmanni
ENSCSEG00000009349	sall1a	99	68.189	ENSCPBG00000015924	SALL1	99	68.200	Chrysemys_picta_bellii
ENSCSEG00000009349	sall1a	100	66.964	ENSCANG00000036664	SALL1	100	67.014	Colobus_angolensis_palliatus
ENSCSEG00000009349	sall1a	100	65.897	ENSCGRG00001023314	-	100	65.823	Cricetulus_griseus_chok1gshd
ENSCSEG00000009349	sall1a	97	66.131	ENSCGRG00000009496	Sall1	99	66.055	Cricetulus_griseus_crigri
ENSCSEG00000009349	sall1a	90	87.489	ENSCVAG00000020513	sall1a	99	87.489	Cyprinodon_variegatus
ENSCSEG00000009349	sall1a	99	78.376	ENSDARG00000074319	sall1a	99	77.618	Danio_rerio
ENSCSEG00000009349	sall1a	99	47.865	ENSDARG00000075891	sall1b	99	48.090	Danio_rerio
ENSCSEG00000009349	sall1a	100	66.914	ENSDNOG00000016413	SALL1	100	66.691	Dasypus_novemcinctus
ENSCSEG00000009349	sall1a	97	66.692	ENSETEG00000015150	SALL1	99	66.513	Echinops_telfairi
ENSCSEG00000009349	sall1a	62	43.147	ENSEBUG00000008798	SALL1	67	41.629	Eptatretus_burgeri
ENSCSEG00000009349	sall1a	69	52.752	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSCSEG00000009349	sall1a	100	66.393	ENSEASG00005014602	SALL1	100	66.021	Equus_asinus_asinus
ENSCSEG00000009349	sall1a	92	64.368	ENSECAG00000011334	SALL1	99	63.770	Equus_caballus
ENSCSEG00000009349	sall1a	97	66.947	ENSEEUG00000002014	SALL1	99	66.412	Erinaceus_europaeus
ENSCSEG00000009349	sall1a	99	53.529	ENSELUG00000017774	-	99	53.494	Esox_lucius
ENSCSEG00000009349	sall1a	99	76.361	ENSELUG00000006159	sall1a	99	76.341	Esox_lucius
ENSCSEG00000009349	sall1a	100	65.127	ENSFCAG00000024654	SALL1	100	65.811	Felis_catus
ENSCSEG00000009349	sall1a	99	68.263	ENSFALG00000000074	SALL1	99	68.165	Ficedula_albicollis
ENSCSEG00000009349	sall1a	74	63.265	ENSFHEG00000008424	-	99	64.796	Fundulus_heteroclitus
ENSCSEG00000009349	sall1a	99	87.939	ENSFHEG00000012579	sall1a	99	87.939	Fundulus_heteroclitus
ENSCSEG00000009349	sall1a	97	41.282	ENSGMOG00000013383	-	98	41.107	Gadus_morhua
ENSCSEG00000009349	sall1a	99	82.814	ENSGMOG00000006103	sall1a	99	82.814	Gadus_morhua
ENSCSEG00000009349	sall1a	99	68.263	ENSGALG00000039238	SALL1	99	67.814	Gallus_gallus
ENSCSEG00000009349	sall1a	99	88.567	ENSGAFG00000009964	sall1a	99	88.567	Gambusia_affinis
ENSCSEG00000009349	sall1a	100	88.558	ENSGACG00000016702	sall1a	100	88.558	Gasterosteus_aculeatus
ENSCSEG00000009349	sall1a	99	68.114	ENSGAGG00000013979	SALL1	99	68.119	Gopherus_agassizii
ENSCSEG00000009349	sall1a	100	66.965	ENSGGOG00000000663	SALL1	100	66.816	Gorilla_gorilla
ENSCSEG00000009349	sall1a	99	89.771	ENSHBUG00000022005	sall1a	99	89.786	Haplochromis_burtoni
ENSCSEG00000009349	sall1a	100	66.990	ENSHGLG00000004288	-	100	66.418	Heterocephalus_glaber_female
ENSCSEG00000009349	sall1a	100	66.990	ENSHGLG00100017496	SALL1	100	66.418	Heterocephalus_glaber_male
ENSCSEG00000009349	sall1a	99	83.271	ENSHCOG00000000974	sall1a	99	83.195	Hippocampus_comes
ENSCSEG00000009349	sall1a	99	78.479	ENSIPUG00000016265	SALL1	99	77.778	Ictalurus_punctatus
ENSCSEG00000009349	sall1a	99	50.265	ENSIPUG00000022928	sall1b	99	50.151	Ictalurus_punctatus
ENSCSEG00000009349	sall1a	100	66.053	ENSSTOG00000020885	SALL1	100	66.127	Ictidomys_tridecemlineatus
ENSCSEG00000009349	sall1a	99	89.618	ENSKMAG00000016681	sall1a	99	89.618	Kryptolebias_marmoratus
ENSCSEG00000009349	sall1a	98	88.300	ENSLBEG00000012207	sall1a	96	88.300	Labrus_bergylta
ENSCSEG00000009349	sall1a	99	68.114	ENSLACG00000003556	SALL1	99	67.640	Latimeria_chalumnae
ENSCSEG00000009349	sall1a	97	38.614	ENSLACG00000014018	-	93	39.968	Latimeria_chalumnae
ENSCSEG00000009349	sall1a	99	75.509	ENSLOCG00000007283	sall1b	99	75.019	Lepisosteus_oculatus
ENSCSEG00000009349	sall1a	98	66.768	ENSLAFG00000015251	SALL1	100	66.667	Loxodonta_africana
ENSCSEG00000009349	sall1a	100	67.039	ENSMFAG00000003298	SALL1	100	66.914	Macaca_fascicularis
ENSCSEG00000009349	sall1a	93	66.961	ENSMMUG00000017200	SALL1	100	66.827	Macaca_mulatta
ENSCSEG00000009349	sall1a	93	67.147	ENSMNEG00000034770	SALL1	100	66.907	Macaca_nemestrina
ENSCSEG00000009349	sall1a	100	67.039	ENSMLEG00000036406	SALL1	100	66.840	Mandrillus_leucophaeus
ENSCSEG00000009349	sall1a	100	91.311	ENSMAMG00000004164	sall1a	100	91.447	Mastacembelus_armatus
ENSCSEG00000009349	sall1a	99	89.771	ENSMZEG00005006479	sall1a	99	89.786	Maylandia_zebra
ENSCSEG00000009349	sall1a	98	67.963	ENSMGAG00000004704	SALL1	99	67.429	Meleagris_gallopavo
ENSCSEG00000009349	sall1a	100	64.952	ENSMAUG00000019093	Sall1	100	65.347	Mesocricetus_auratus
ENSCSEG00000009349	sall1a	100	66.592	ENSMICG00000036486	SALL1	100	66.145	Microcebus_murinus
ENSCSEG00000009349	sall1a	100	88.940	ENSMMOG00000016400	sall1a	100	88.940	Mola_mola
ENSCSEG00000009349	sall1a	100	67.737	ENSMODG00000013114	SALL1	100	67.364	Monodelphis_domestica
ENSCSEG00000009349	sall1a	100	89.779	ENSMALG00000013400	sall1a	100	89.779	Monopterus_albus
ENSCSEG00000009349	sall1a	100	65.778	MGP_CAROLIEiJ_G0031362	Sall1	100	65.311	Mus_caroli
ENSCSEG00000009349	sall1a	100	65.877	ENSMUSG00000031665	Sall1	100	65.285	Mus_musculus
ENSCSEG00000009349	sall1a	100	65.504	MGP_PahariEiJ_G0022961	Sall1	100	65.134	Mus_pahari
ENSCSEG00000009349	sall1a	100	65.729	MGP_SPRETEiJ_G0032480	Sall1	100	65.137	Mus_spretus
ENSCSEG00000009349	sall1a	99	65.911	ENSMPUG00000003265	SALL1	96	65.608	Mustela_putorius_furo
ENSCSEG00000009349	sall1a	97	64.867	ENSMLUG00000015541	SALL1	99	64.715	Myotis_lucifugus
ENSCSEG00000009349	sall1a	99	89.924	ENSNBRG00000009307	sall1a	99	89.951	Neolamprologus_brichardi
ENSCSEG00000009349	sall1a	94	80.000	ENSNLEG00000001008	SALL1	99	80.000	Nomascus_leucogenys
ENSCSEG00000009349	sall1a	100	67.764	ENSMEUG00000012206	SALL1	100	67.390	Notamacropus_eugenii
ENSCSEG00000009349	sall1a	85	71.261	ENSOPRG00000005645	SALL1	71	70.614	Ochotona_princeps
ENSCSEG00000009349	sall1a	100	66.518	ENSODEG00000003685	SALL1	100	65.972	Octodon_degus
ENSCSEG00000009349	sall1a	99	90.076	ENSONIG00000002831	sall1a	99	90.076	Oreochromis_niloticus
ENSCSEG00000009349	sall1a	95	74.678	ENSOANG00000013399	SALL1	96	77.311	Ornithorhynchus_anatinus
ENSCSEG00000009349	sall1a	99	88.092	ENSORLG00000013827	sall1a	99	88.964	Oryzias_latipes
ENSCSEG00000009349	sall1a	99	88.015	ENSORLG00020020570	sall1a	99	88.015	Oryzias_latipes_hni
ENSCSEG00000009349	sall1a	99	88.015	ENSORLG00015018830	sall1a	99	88.964	Oryzias_latipes_hsok
ENSCSEG00000009349	sall1a	99	88.168	ENSOMEG00000016043	sall1a	99	88.633	Oryzias_melastigma
ENSCSEG00000009349	sall1a	100	66.766	ENSOGAG00000027316	SALL1	100	66.320	Otolemur_garnettii
ENSCSEG00000009349	sall1a	100	62.389	ENSOARG00000017583	SALL1	100	61.738	Ovis_aries
ENSCSEG00000009349	sall1a	100	49.438	ENSPPAG00000035136	-	100	49.513	Pan_paniscus
ENSCSEG00000009349	sall1a	99	66.867	ENSPPAG00000035657	SALL1	100	67.020	Pan_paniscus
ENSCSEG00000009349	sall1a	100	65.127	ENSPPRG00000023283	SALL1	100	65.811	Panthera_pardus
ENSCSEG00000009349	sall1a	81	81.143	ENSPTIG00000013539	-	94	70.169	Panthera_tigris_altaica
ENSCSEG00000009349	sall1a	99	49.506	ENSPTRG00000045256	-	99	49.924	Pan_troglodytes
ENSCSEG00000009349	sall1a	100	67.039	ENSPTRG00000008108	SALL1	100	66.914	Pan_troglodytes
ENSCSEG00000009349	sall1a	100	66.964	ENSPANG00000024176	SALL1	100	66.766	Papio_anubis
ENSCSEG00000009349	sall1a	99	71.245	ENSPKIG00000022251	sall1a	99	70.975	Paramormyrops_kingsleyae
ENSCSEG00000009349	sall1a	99	68.381	ENSPKIG00000005383	-	99	68.939	Paramormyrops_kingsleyae
ENSCSEG00000009349	sall1a	99	68.464	ENSPSIG00000008582	SALL1	99	68.189	Pelodiscus_sinensis
ENSCSEG00000009349	sall1a	100	82.318	ENSPMGG00000021788	sall1a	100	82.694	Periophthalmus_magnuspinnatus
ENSCSEG00000009349	sall1a	97	48.112	ENSPMAG00000008148	sall1b	96	47.875	Petromyzon_marinus
ENSCSEG00000009349	sall1a	100	67.689	ENSPCIG00000017840	SALL1	100	67.315	Phascolarctos_cinereus
ENSCSEG00000009349	sall1a	98	88.837	ENSPFOG00000015799	sall1a	96	88.837	Poecilia_formosa
ENSCSEG00000009349	sall1a	99	89.024	ENSPLAG00000022539	sall1a	99	89.024	Poecilia_latipinna
ENSCSEG00000009349	sall1a	99	89.101	ENSPMEG00000020894	sall1a	99	89.101	Poecilia_mexicana
ENSCSEG00000009349	sall1a	99	88.567	ENSPREG00000006802	sall1a	99	88.567	Poecilia_reticulata
ENSCSEG00000009349	sall1a	90	65.779	ENSPPYG00000007345	SALL1	96	65.724	Pongo_abelii
ENSCSEG00000009349	sall1a	84	68.182	ENSPCAG00000008162	SALL1	93	67.698	Procavia_capensis
ENSCSEG00000009349	sall1a	100	66.642	ENSPCOG00000028192	SALL1	100	66.295	Propithecus_coquereli
ENSCSEG00000009349	sall1a	66	68.894	ENSPVAG00000015374	SALL1	100	69.124	Pteropus_vampyrus
ENSCSEG00000009349	sall1a	99	89.924	ENSPNYG00000010865	sall1a	99	89.951	Pundamilia_nyererei
ENSCSEG00000009349	sall1a	99	53.418	ENSPNAG00000007442	sall1b	99	53.047	Pygocentrus_nattereri
ENSCSEG00000009349	sall1a	75	43.744	ENSPNAG00000028248	-	81	44.323	Pygocentrus_nattereri
ENSCSEG00000009349	sall1a	99	78.056	ENSPNAG00000023644	sall1a	99	77.052	Pygocentrus_nattereri
ENSCSEG00000009349	sall1a	100	65.648	ENSRNOG00000013907	Sall1	100	65.302	Rattus_norvegicus
ENSCSEG00000009349	sall1a	93	67.121	ENSRBIG00000015707	SALL1	100	66.827	Rhinopithecus_bieti
ENSCSEG00000009349	sall1a	99	66.692	ENSRROG00000035777	SALL1	100	66.667	Rhinopithecus_roxellana
ENSCSEG00000009349	sall1a	100	67.113	ENSSBOG00000032186	SALL1	100	67.212	Saimiri_boliviensis_boliviensis
ENSCSEG00000009349	sall1a	100	67.315	ENSSHAG00000009477	SALL1	100	66.717	Sarcophilus_harrisii
ENSCSEG00000009349	sall1a	98	70.453	ENSSFOG00015001590	sall1a	99	70.308	Scleropages_formosus
ENSCSEG00000009349	sall1a	99	71.805	ENSSFOG00015020020	sall1a	99	71.654	Scleropages_formosus
ENSCSEG00000009349	sall1a	100	92.061	ENSSMAG00000009160	sall1a	100	92.061	Scophthalmus_maximus
ENSCSEG00000009349	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSCSEG00000009349	sall1a	100	92.901	ENSSDUG00000006507	sall1a	100	93.163	Seriola_dumerili
ENSCSEG00000009349	sall1a	100	92.901	ENSSLDG00000017721	sall1a	100	92.901	Seriola_lalandi_dorsalis
ENSCSEG00000009349	sall1a	97	65.551	ENSSARG00000000661	SALL1	99	65.982	Sorex_araneus
ENSCSEG00000009349	sall1a	99	67.440	ENSSPUG00000000156	SALL1	99	67.290	Sphenodon_punctatus
ENSCSEG00000009349	sall1a	99	90.923	ENSSPAG00000021615	sall1a	99	90.923	Stegastes_partitus
ENSCSEG00000009349	sall1a	100	65.502	ENSSSCG00000002836	SALL1	100	65.625	Sus_scrofa
ENSCSEG00000009349	sall1a	99	68.063	ENSTGUG00000007514	SALL1	99	67.790	Taeniopygia_guttata
ENSCSEG00000009349	sall1a	91	85.822	ENSTRUG00000008950	sall1a	100	85.822	Takifugu_rubripes
ENSCSEG00000009349	sall1a	92	84.149	ENSTNIG00000004257	sall1a	100	84.149	Tetraodon_nigroviridis
ENSCSEG00000009349	sall1a	62	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSCSEG00000009349	sall1a	90	64.405	ENSUAMG00000023379	-	92	64.209	Ursus_americanus
ENSCSEG00000009349	sall1a	90	64.554	ENSVVUG00000019383	-	99	64.892	Vulpes_vulpes
ENSCSEG00000009349	sall1a	83	61.538	ENSXETG00000017176	sall2	80	61.538	Xenopus_tropicalis
ENSCSEG00000009349	sall1a	99	64.942	ENSXETG00000018417	sall1	99	63.921	Xenopus_tropicalis
ENSCSEG00000009349	sall1a	99	88.872	ENSXMAG00000016273	sall1a	99	88.872	Xiphophorus_maculatus