EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009430 (Gene tree)
Gene ID: 103381306
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8299 bases
Position: chr1:15651015-15659313
Accession: 103381306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000014680	RRM_1	PF00076.22	1.6e-08	1	1
ENSCSEP00000014680	PWI	PF01480.17	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000014858	-	2421	XM_008313592	ENSCSEP00000014680	806 (aa)	XP_008311814	-

Gene Model

Click here to download ENSCSEG00000009430's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009430	rbm25a	62	68.588	ENSCSEG00000020737	rbm25b	57	71.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009430	rbm25a	56	89.011	ENSAPOG00000017757	rbm25a	55	88.840	Acanthochromis_polyacanthus
ENSCSEG00000009430	rbm25a	60	66.598	ENSACIG00000014178	rbm25b	55	70.779	Amphilophus_citrinellus
ENSCSEG00000009430	rbm25a	56	86.154	ENSACIG00000019482	rbm25a	55	85.652	Amphilophus_citrinellus
ENSCSEG00000009430	rbm25a	53	87.209	ENSAOCG00000013695	rbm25a	53	87.037	Amphiprion_ocellaris
ENSCSEG00000009430	rbm25a	61	67.485	ENSAOCG00000019308	rbm25b	55	70.259	Amphiprion_ocellaris
ENSCSEG00000009430	rbm25a	56	87.800	ENSAPEG00000007514	rbm25a	56	87.636	Amphiprion_percula
ENSCSEG00000009430	rbm25a	61	67.063	ENSAPEG00000009666	rbm25b	59	72.629	Amphiprion_percula
ENSCSEG00000009430	rbm25a	58	86.596	ENSATEG00000020676	rbm25a	75	77.315	Anabas_testudineus
ENSCSEG00000009430	rbm25a	62	69.339	ENSATEG00000017312	rbm25b	56	73.377	Anabas_testudineus
ENSCSEG00000009430	rbm25a	93	78.831	ENSACLG00000027482	rbm25a	86	82.895	Astatotilapia_calliptera
ENSCSEG00000009430	rbm25a	61	71.313	ENSACLG00000024359	rbm25b	56	74.892	Astatotilapia_calliptera
ENSCSEG00000009430	rbm25a	54	71.136	ENSAMXG00000024525	rbm25b	54	75.546	Astyanax_mexicanus
ENSCSEG00000009430	rbm25a	55	33.996	WBGene00012245	W04D2.6	78	32.723	Caenorhabditis_elegans
ENSCSEG00000009430	rbm25a	58	83.784	ENSCHOG00000008903	RBM25	63	84.286	Choloepus_hoffmanni
ENSCSEG00000009430	rbm25a	71	74.878	ENSCVAG00000005498	rbm25a	99	78.626	Cyprinodon_variegatus
ENSCSEG00000009430	rbm25a	60	69.592	ENSCVAG00000003478	rbm25b	55	73.144	Cyprinodon_variegatus
ENSCSEG00000009430	rbm25a	54	64.465	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSCSEG00000009430	rbm25a	58	70.954	ENSELUG00000007730	rbm25b	51	81.977	Esox_lucius
ENSCSEG00000009430	rbm25a	57	67.532	ENSELUG00000021847	rbm25a	51	67.174	Esox_lucius
ENSCSEG00000009430	rbm25a	56	75.000	ENSFHEG00000005318	rbm25a	59	74.556	Fundulus_heteroclitus
ENSCSEG00000009430	rbm25a	61	71.630	ENSFHEG00000003513	rbm25b	57	74.837	Fundulus_heteroclitus
ENSCSEG00000009430	rbm25a	84	72.807	ENSGMOG00000014097	rbm25b	63	72.687	Gadus_morhua
ENSCSEG00000009430	rbm25a	59	83.137	ENSGMOG00000014070	rbm25a	87	73.568	Gadus_morhua
ENSCSEG00000009430	rbm25a	97	71.744	ENSGAFG00000001092	rbm25b	50	74.678	Gambusia_affinis
ENSCSEG00000009430	rbm25a	100	76.820	ENSGAFG00000018036	rbm25a	54	78.696	Gambusia_affinis
ENSCSEG00000009430	rbm25a	56	86.123	ENSHBUG00000016908	rbm25a	55	85.965	Haplochromis_burtoni
ENSCSEG00000009430	rbm25a	61	71.515	ENSHBUG00000018499	rbm25b	56	75.108	Haplochromis_burtoni
ENSCSEG00000009430	rbm25a	100	65.909	ENSHCOG00000000142	rbm25b	56	68.009	Hippocampus_comes
ENSCSEG00000009430	rbm25a	96	76.359	ENSKMAG00000016242	rbm25a	56	76.754	Kryptolebias_marmoratus
ENSCSEG00000009430	rbm25a	57	73.810	ENSKMAG00000018826	rbm25b	56	74.026	Kryptolebias_marmoratus
ENSCSEG00000009430	rbm25a	62	69.515	ENSLBEG00000010667	rbm25b	56	74.675	Labrus_bergylta
ENSCSEG00000009430	rbm25a	55	71.202	ENSLACG00000011845	RBM25	52	71.522	Latimeria_chalumnae
ENSCSEG00000009430	rbm25a	54	81.944	ENSMAMG00000000165	rbm25a	51	82.783	Mastacembelus_armatus
ENSCSEG00000009430	rbm25a	61	71.313	ENSMZEG00005001453	rbm25b	56	74.892	Maylandia_zebra
ENSCSEG00000009430	rbm25a	56	86.123	ENSMZEG00005011183	rbm25a	55	85.965	Maylandia_zebra
ENSCSEG00000009430	rbm25a	100	63.436	ENSMMOG00000015545	rbm25b	62	73.377	Mola_mola
ENSCSEG00000009430	rbm25a	58	82.340	ENSMMOG00000009065	rbm25a	55	83.772	Mola_mola
ENSCSEG00000009430	rbm25a	60	72.222	ENSMALG00000020441	rbm25b	88	73.650	Monopterus_albus
ENSCSEG00000009430	rbm25a	56	85.903	ENSNBRG00000003761	rbm25a	55	85.746	Neolamprologus_brichardi
ENSCSEG00000009430	rbm25a	100	59.886	ENSOCUG00000013737	RBM25	84	71.554	Oryctolagus_cuniculus
ENSCSEG00000009430	rbm25a	60	70.782	ENSORLG00000011874	rbm25b	56	73.434	Oryzias_latipes
ENSCSEG00000009430	rbm25a	60	71.458	ENSORLG00020016422	rbm25b	56	73.276	Oryzias_latipes_hni
ENSCSEG00000009430	rbm25a	60	71.399	ENSORLG00015011269	rbm25b	56	74.082	Oryzias_latipes_hsok
ENSCSEG00000009430	rbm25a	60	71.869	ENSOMEG00000023172	rbm25b	56	72.747	Oryzias_melastigma
ENSCSEG00000009430	rbm25a	53	80.444	ENSOMEG00000022138	rbm25a	57	78.992	Oryzias_melastigma
ENSCSEG00000009430	rbm25a	59	73.069	ENSPKIG00000003203	rbm25b	56	75.546	Paramormyrops_kingsleyae
ENSCSEG00000009430	rbm25a	60	70.876	ENSPMGG00000015740	rbm25b	57	73.820	Periophthalmus_magnuspinnatus
ENSCSEG00000009430	rbm25a	55	69.683	ENSPMGG00000001791	rbm25a	100	69.231	Periophthalmus_magnuspinnatus
ENSCSEG00000009430	rbm25a	56	76.400	ENSPFOG00000017931	rbm25a	58	76.143	Poecilia_formosa
ENSCSEG00000009430	rbm25a	55	74.179	ENSPFOG00000018808	rbm25b	55	74.242	Poecilia_formosa
ENSCSEG00000009430	rbm25a	100	76.471	ENSPLAG00000018338	rbm25a	58	76.342	Poecilia_latipinna
ENSCSEG00000009430	rbm25a	100	76.168	ENSPMEG00000024470	rbm25a	61	76.143	Poecilia_mexicana
ENSCSEG00000009430	rbm25a	55	74.179	ENSPMEG00000019161	rbm25b	55	74.242	Poecilia_mexicana
ENSCSEG00000009430	rbm25a	56	80.659	ENSPREG00000009228	rbm25a	55	80.131	Poecilia_reticulata
ENSCSEG00000009430	rbm25a	55	74.292	ENSPREG00000008522	rbm25b	56	74.409	Poecilia_reticulata
ENSCSEG00000009430	rbm25a	57	83.333	ENSPNYG00000022596	rbm25a	53	82.895	Pundamilia_nyererei
ENSCSEG00000009430	rbm25a	54	70.379	ENSPNAG00000012024	rbm25b	55	75.055	Pygocentrus_nattereri
ENSCSEG00000009430	rbm25a	62	78.750	ENSSBOG00000034153	RBM25	52	56.047	Saimiri_boliviensis_boliviensis
ENSCSEG00000009430	rbm25a	54	75.792	ENSSFOG00015007093	rbm25	56	74.946	Scleropages_formosus
ENSCSEG00000009430	rbm25a	58	87.924	ENSSMAG00000009745	rbm25a	56	89.520	Scophthalmus_maximus
ENSCSEG00000009430	rbm25a	60	69.919	ENSSMAG00000002520	rbm25b	58	72.458	Scophthalmus_maximus
ENSCSEG00000009430	rbm25a	56	89.427	ENSSDUG00000017984	rbm25a	57	89.254	Seriola_dumerili
ENSCSEG00000009430	rbm25a	57	74.026	ENSSLDG00000024573	rbm25b	100	74.892	Seriola_lalandi_dorsalis
ENSCSEG00000009430	rbm25a	56	89.427	ENSSLDG00000010342	rbm25a	56	89.254	Seriola_lalandi_dorsalis
ENSCSEG00000009430	rbm25a	56	86.938	ENSSPAG00000011114	rbm25a	56	86.141	Stegastes_partitus
ENSCSEG00000009430	rbm25a	61	68.317	ENSSPAG00000016168	rbm25b	56	73.060	Stegastes_partitus
ENSCSEG00000009430	rbm25a	61	68.600	ENSTRUG00000017964	rbm25b	57	73.218	Takifugu_rubripes
ENSCSEG00000009430	rbm25a	57	79.212	ENSTRUG00000003076	rbm25a	59	79.212	Takifugu_rubripes
ENSCSEG00000009430	rbm25a	56	78.571	ENSTBEG00000010538	-	67	77.404	Tupaia_belangeri
ENSCSEG00000009430	rbm25a	51	63.285	ENSVPAG00000009052	RBM25	77	72.308	Vicugna_pacos
ENSCSEG00000009430	rbm25a	56	58.502	ENSXETG00000021857	rbm25	54	71.991	Xenopus_tropicalis
ENSCSEG00000009430	rbm25a	100	66.667	ENSXCOG00000002222	rbm25b	53	66.958	Xiphophorus_couchianus
ENSCSEG00000009430	rbm25a	57	79.565	ENSXCOG00000004043	RBM25	54	78.478	Xiphophorus_couchianus
ENSCSEG00000009430	rbm25a	100	70.700	ENSXMAG00000017290	rbm25b	56	74.034	Xiphophorus_maculatus
ENSCSEG00000009430	rbm25a	100	73.866	ENSXMAG00000009077	RBM25	58	77.485	Xiphophorus_maculatus