EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000009643 (Gene tree)
Gene ID: 103394662
Gene Symbol: yars
Alias: TyrRS|cb204|wu:fk52b08
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3851 bases
Position: chr18:14093356-14097206
Accession: 103394662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015000	tRNA_bind	PF01588.20	7.9e-31	1	1
ENSCSEP00000015026	tRNA_bind	PF01588.20	8.8e-31	1	1
ENSCSEP00000015000	tRNA-synt_1b	PF00579.25	4.2e-73	1	1
ENSCSEP00000015026	tRNA-synt_1b	PF00579.25	4.8e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015204	-	1825	-	ENSCSEP00000015026	553 (aa)	-	-
ENSCSET00000015180	-	1764	XM_008332070	ENSCSEP00000015000	529 (aa)	XP_008330292	UPI0004975F88

Gene Model

Click here to download ENSCSEG00000009643's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009643	yars	100	78.450	ENSG00000134684	YARS	100	78.261	Homo_sapiens
ENSCSEG00000009643	yars	100	89.869	ENSAPOG00000020788	yars	100	89.681	Acanthochromis_polyacanthus
ENSCSEG00000009643	yars	100	78.828	ENSAMEG00000007476	YARS	100	78.639	Ailuropoda_melanoleuca
ENSCSEG00000009643	yars	100	90.926	ENSACIG00000017504	yars	100	90.926	Amphilophus_citrinellus
ENSCSEG00000009643	yars	100	89.513	ENSAOCG00000009987	yars	100	90.075	Amphiprion_ocellaris
ENSCSEG00000009643	yars	100	89.513	ENSAPEG00000001273	yars	100	90.075	Amphiprion_percula
ENSCSEG00000009643	yars	100	89.139	ENSATEG00000005301	yars	100	89.888	Anabas_testudineus
ENSCSEG00000009643	yars	98	71.567	ENSAPLG00000005739	YARS	98	71.567	Anas_platyrhynchos
ENSCSEG00000009643	yars	99	76.894	ENSACAG00000003568	YARS	99	76.705	Anolis_carolinensis
ENSCSEG00000009643	yars	100	78.639	ENSANAG00000034533	YARS	100	78.450	Aotus_nancymaae
ENSCSEG00000009643	yars	100	89.414	ENSACLG00000004618	yars	100	89.981	Astatotilapia_calliptera
ENSCSEG00000009643	yars	100	85.849	ENSAMXG00000010993	yars	100	85.849	Astyanax_mexicanus
ENSCSEG00000009643	yars	100	77.883	ENSBTAG00000018065	YARS	100	77.694	Bos_taurus
ENSCSEG00000009643	yars	100	78.639	ENSCJAG00000001037	YARS	100	78.450	Callithrix_jacchus
ENSCSEG00000009643	yars	100	78.450	ENSCAFG00000010481	YARS	94	78.261	Canis_familiaris
ENSCSEG00000009643	yars	100	78.261	ENSCAFG00020025379	YARS	100	78.261	Canis_lupus_dingo
ENSCSEG00000009643	yars	100	78.261	ENSCHIG00000014340	YARS	100	78.072	Capra_hircus
ENSCSEG00000009643	yars	100	78.072	ENSTSYG00000005019	YARS	100	77.883	Carlito_syrichta
ENSCSEG00000009643	yars	90	54.832	ENSCAPG00000008627	YARS	100	55.274	Cavia_aperea
ENSCSEG00000009643	yars	100	77.316	ENSCPOG00000009614	YARS	94	77.127	Cavia_porcellus
ENSCSEG00000009643	yars	100	78.450	ENSCCAG00000036757	YARS	98	78.261	Cebus_capucinus
ENSCSEG00000009643	yars	100	78.261	ENSCATG00000044394	YARS	100	78.072	Cercocebus_atys
ENSCSEG00000009643	yars	100	77.505	ENSCLAG00000008977	YARS	93	77.316	Chinchilla_lanigera
ENSCSEG00000009643	yars	100	78.261	ENSCSAG00000001062	YARS	100	78.072	Chlorocebus_sabaeus
ENSCSEG00000009643	yars	96	69.412	ENSCHOG00000003939	YARS	100	69.216	Choloepus_hoffmanni
ENSCSEG00000009643	yars	100	76.749	ENSCPBG00000010998	YARS	100	76.792	Chrysemys_picta_bellii
ENSCSEG00000009643	yars	100	68.972	ENSCING00000005113	-	100	68.972	Ciona_intestinalis
ENSCSEG00000009643	yars	99	65.465	ENSCSAVG00000003706	-	99	65.465	Ciona_savignyi
ENSCSEG00000009643	yars	100	77.883	ENSCANG00000038285	YARS	100	77.694	Colobus_angolensis_palliatus
ENSCSEG00000009643	yars	100	79.017	ENSCGRG00001010863	Yars	100	74.669	Cricetulus_griseus_chok1gshd
ENSCSEG00000009643	yars	100	79.017	ENSCGRG00000007526	Yars	94	78.828	Cricetulus_griseus_crigri
ENSCSEG00000009643	yars	100	91.493	ENSCVAG00000016583	yars	100	91.493	Cyprinodon_variegatus
ENSCSEG00000009643	yars	100	84.688	ENSDARG00000035913	yars	100	92.982	Danio_rerio
ENSCSEG00000009643	yars	100	78.072	ENSDNOG00000000536	YARS	100	77.883	Dasypus_novemcinctus
ENSCSEG00000009643	yars	100	78.639	ENSDORG00000011871	Yars	100	78.450	Dipodomys_ordii
ENSCSEG00000009643	yars	99	66.793	FBgn0027080	TyrRS	99	66.793	Drosophila_melanogaster
ENSCSEG00000009643	yars	87	84.127	ENSETEG00000000215	YARS	87	84.127	Echinops_telfairi
ENSCSEG00000009643	yars	99	66.352	ENSEBUG00000004750	yars	100	65.720	Eptatretus_burgeri
ENSCSEG00000009643	yars	99	78.244	ENSEASG00005011762	YARS	93	77.694	Equus_asinus_asinus
ENSCSEG00000009643	yars	99	78.244	ENSECAG00000010015	YARS	68	77.694	Equus_caballus
ENSCSEG00000009643	yars	77	72.340	ENSEEUG00000005992	-	73	70.199	Erinaceus_europaeus
ENSCSEG00000009643	yars	100	86.604	ENSELUG00000017171	yars	100	86.011	Esox_lucius
ENSCSEG00000009643	yars	100	65.595	ENSFCAG00000000704	YARS	100	65.406	Felis_catus
ENSCSEG00000009643	yars	98	77.159	ENSFALG00000000592	YARS	92	76.392	Ficedula_albicollis
ENSCSEG00000009643	yars	100	77.316	ENSFDAG00000006620	YARS	94	77.316	Fukomys_damarensis
ENSCSEG00000009643	yars	100	89.662	ENSFHEG00000022444	yars	100	90.038	Fundulus_heteroclitus
ENSCSEG00000009643	yars	96	82.941	ENSGMOG00000006555	yars	100	82.941	Gadus_morhua
ENSCSEG00000009643	yars	98	77.351	ENSGALG00000003563	YARS	97	76.967	Gallus_gallus
ENSCSEG00000009643	yars	100	87.382	ENSGACG00000008516	yars	100	87.947	Gasterosteus_aculeatus
ENSCSEG00000009643	yars	100	77.883	ENSGAGG00000024290	YARS	100	77.883	Gopherus_agassizii
ENSCSEG00000009643	yars	100	78.639	ENSGGOG00000014013	YARS	100	78.450	Gorilla_gorilla
ENSCSEG00000009643	yars	100	88.598	ENSHBUG00000018909	yars	100	89.159	Haplochromis_burtoni
ENSCSEG00000009643	yars	100	77.127	ENSHGLG00000013843	YARS	94	76.938	Heterocephalus_glaber_female
ENSCSEG00000009643	yars	70	73.370	ENSHGLG00100020546	-	99	72.826	Heterocephalus_glaber_male
ENSCSEG00000009643	yars	100	75.992	ENSHGLG00100002785	-	100	75.803	Heterocephalus_glaber_male
ENSCSEG00000009643	yars	100	83.919	ENSHCOG00000006672	yars	100	84.288	Hippocampus_comes
ENSCSEG00000009643	yars	99	82.576	ENSIPUG00000021749	yars	99	82.576	Ictalurus_punctatus
ENSCSEG00000009643	yars	100	79.584	ENSSTOG00000012031	YARS	94	79.395	Ictidomys_tridecemlineatus
ENSCSEG00000009643	yars	100	77.505	ENSJJAG00000013281	Yars	93	77.316	Jaculus_jaculus
ENSCSEG00000009643	yars	100	88.158	ENSKMAG00000021752	yars	100	88.534	Kryptolebias_marmoratus
ENSCSEG00000009643	yars	100	89.159	ENSLBEG00000024080	yars	100	89.720	Labrus_bergylta
ENSCSEG00000009643	yars	100	77.401	ENSLACG00000015577	YARS	100	76.749	Latimeria_chalumnae
ENSCSEG00000009643	yars	99	82.955	ENSLOCG00000002165	yars	99	82.765	Lepisosteus_oculatus
ENSCSEG00000009643	yars	100	77.694	ENSLAFG00000003786	YARS	96	77.505	Loxodonta_africana
ENSCSEG00000009643	yars	100	73.346	ENSMFAG00000040933	YARS	100	73.157	Macaca_fascicularis
ENSCSEG00000009643	yars	100	78.450	ENSMMUG00000019746	YARS	100	78.261	Macaca_mulatta
ENSCSEG00000009643	yars	100	71.963	ENSMNEG00000031865	YARS	100	71.776	Macaca_nemestrina
ENSCSEG00000009643	yars	100	78.261	ENSMLEG00000041315	YARS	100	78.072	Mandrillus_leucophaeus
ENSCSEG00000009643	yars	100	90.038	ENSMAMG00000006092	yars	100	90.789	Mastacembelus_armatus
ENSCSEG00000009643	yars	100	89.869	ENSMZEG00005011426	yars	100	89.493	Maylandia_zebra
ENSCSEG00000009643	yars	97	76.712	ENSMGAG00000005063	YARS	97	76.321	Meleagris_gallopavo
ENSCSEG00000009643	yars	97	78.988	ENSMAUG00000021126	Yars	99	78.794	Mesocricetus_auratus
ENSCSEG00000009643	yars	100	79.206	ENSMICG00000011204	YARS	100	79.017	Microcebus_murinus
ENSCSEG00000009643	yars	100	78.828	ENSMOCG00000011342	Yars	94	78.639	Microtus_ochrogaster
ENSCSEG00000009643	yars	100	83.743	ENSMMOG00000021133	yars	100	83.554	Mola_mola
ENSCSEG00000009643	yars	100	76.938	ENSMODG00000017404	YARS	100	76.749	Monodelphis_domestica
ENSCSEG00000009643	yars	62	93.617	ENSMALG00000003648	yars	90	93.617	Monopterus_albus
ENSCSEG00000009643	yars	100	78.639	MGP_CAROLIEiJ_G0026513	Yars	94	78.450	Mus_caroli
ENSCSEG00000009643	yars	100	78.828	ENSMUSG00000028811	Yars	94	78.639	Mus_musculus
ENSCSEG00000009643	yars	100	77.505	MGP_PahariEiJ_G0028844	Yars	94	77.316	Mus_pahari
ENSCSEG00000009643	yars	100	78.450	MGP_SPRETEiJ_G0027493	Yars	94	78.261	Mus_spretus
ENSCSEG00000009643	yars	100	78.450	ENSMLUG00000000759	YARS	100	78.261	Myotis_lucifugus
ENSCSEG00000009643	yars	97	78.906	ENSNGAG00000001419	Yars	100	78.824	Nannospalax_galili
ENSCSEG00000009643	yars	100	90.548	ENSNBRG00000020413	yars	100	90.548	Neolamprologus_brichardi
ENSCSEG00000009643	yars	100	78.072	ENSNLEG00000002922	YARS	100	77.883	Nomascus_leucogenys
ENSCSEG00000009643	yars	76	82.353	ENSMEUG00000011824	-	75	82.353	Notamacropus_eugenii
ENSCSEG00000009643	yars	100	73.346	ENSOPRG00000003669	YARS	100	73.157	Ochotona_princeps
ENSCSEG00000009643	yars	100	76.938	ENSODEG00000005363	YARS	94	76.749	Octodon_degus
ENSCSEG00000009643	yars	100	89.533	ENSONIG00000015400	yars	100	90.093	Oreochromis_niloticus
ENSCSEG00000009643	yars	93	73.146	ENSOANG00000011779	YARS	100	72.946	Ornithorhynchus_anatinus
ENSCSEG00000009643	yars	100	79.017	ENSOCUG00000010007	YARS	100	78.828	Oryctolagus_cuniculus
ENSCSEG00000009643	yars	98	87.238	ENSORLG00000013982	yars	96	87.238	Oryzias_latipes
ENSCSEG00000009643	yars	100	87.759	ENSORLG00020020750	yars	100	87.759	Oryzias_latipes_hni
ENSCSEG00000009643	yars	100	86.867	ENSORLG00015008963	yars	100	87.054	Oryzias_latipes_hsok
ENSCSEG00000009643	yars	100	88.701	ENSOMEG00000013016	yars	100	88.324	Oryzias_melastigma
ENSCSEG00000009643	yars	100	78.261	ENSOGAG00000007359	YARS	100	78.072	Otolemur_garnettii
ENSCSEG00000009643	yars	100	78.072	ENSOARG00000020897	YARS	93	77.883	Ovis_aries
ENSCSEG00000009643	yars	100	78.639	ENSPPAG00000035791	YARS	98	78.947	Pan_paniscus
ENSCSEG00000009643	yars	100	78.261	ENSPPRG00000023768	YARS	100	78.072	Panthera_pardus
ENSCSEG00000009643	yars	100	78.261	ENSPTIG00000003438	YARS	100	78.072	Panthera_tigris_altaica
ENSCSEG00000009643	yars	100	78.639	ENSPTRG00000000491	YARS	100	78.450	Pan_troglodytes
ENSCSEG00000009643	yars	100	78.261	ENSPANG00000009804	YARS	100	78.072	Papio_anubis
ENSCSEG00000009643	yars	100	83.176	ENSPKIG00000024596	yars	100	83.176	Paramormyrops_kingsleyae
ENSCSEG00000009643	yars	100	68.362	ENSPSIG00000006945	YARS	100	68.362	Pelodiscus_sinensis
ENSCSEG00000009643	yars	100	88.847	ENSPMGG00000022917	yars	100	88.658	Periophthalmus_magnuspinnatus
ENSCSEG00000009643	yars	100	77.883	ENSPEMG00000010746	Yars	94	77.694	Peromyscus_maniculatus_bairdii
ENSCSEG00000009643	yars	99	78.030	ENSPCIG00000022457	YARS	99	77.841	Phascolarctos_cinereus
ENSCSEG00000009643	yars	100	87.970	ENSPFOG00000014808	yars	100	88.722	Poecilia_formosa
ENSCSEG00000009643	yars	100	88.346	ENSPLAG00000020075	yars	100	89.098	Poecilia_latipinna
ENSCSEG00000009643	yars	100	88.158	ENSPMEG00000002803	yars	100	88.910	Poecilia_mexicana
ENSCSEG00000009643	yars	100	88.847	ENSPREG00000018280	yars	100	88.847	Poecilia_reticulata
ENSCSEG00000009643	yars	100	76.316	ENSPPYG00000001585	YARS	100	76.128	Pongo_abelii
ENSCSEG00000009643	yars	76	76.119	ENSPCAG00000011170	YARS	76	75.871	Procavia_capensis
ENSCSEG00000009643	yars	100	78.450	ENSPCOG00000021026	YARS	100	78.261	Propithecus_coquereli
ENSCSEG00000009643	yars	100	78.639	ENSPVAG00000010984	YARS	100	78.450	Pteropus_vampyrus
ENSCSEG00000009643	yars	100	89.603	ENSPNYG00000000860	yars	100	89.981	Pundamilia_nyererei
ENSCSEG00000009643	yars	100	84.688	ENSPNAG00000009622	yars	100	84.688	Pygocentrus_nattereri
ENSCSEG00000009643	yars	100	78.639	ENSRNOG00000007213	Yars	94	78.450	Rattus_norvegicus
ENSCSEG00000009643	yars	54	66.319	ENSRBIG00000044271	-	83	68.478	Rhinopithecus_bieti
ENSCSEG00000009643	yars	100	78.261	ENSRROG00000039913	YARS	100	78.072	Rhinopithecus_roxellana
ENSCSEG00000009643	yars	100	78.261	ENSSBOG00000030205	YARS	100	78.168	Saimiri_boliviensis_boliviensis
ENSCSEG00000009643	yars	100	77.883	ENSSHAG00000011851	YARS	100	77.694	Sarcophilus_harrisii
ENSCSEG00000009643	yars	100	82.609	ENSSFOG00015007179	yars	100	82.420	Scleropages_formosus
ENSCSEG00000009643	yars	100	86.957	ENSSMAG00000020736	yars	100	86.957	Scophthalmus_maximus
ENSCSEG00000009643	yars	100	91.887	ENSSDUG00000001782	yars	100	91.698	Seriola_dumerili
ENSCSEG00000009643	yars	100	91.493	ENSSLDG00000008268	yars	100	91.493	Seriola_lalandi_dorsalis
ENSCSEG00000009643	yars	86	71.691	ENSSARG00000012227	-	84	71.691	Sorex_araneus
ENSCSEG00000009643	yars	100	77.736	ENSSPUG00000000333	YARS	100	77.316	Sphenodon_punctatus
ENSCSEG00000009643	yars	100	89.139	ENSSPAG00000020632	yars	100	85.687	Stegastes_partitus
ENSCSEG00000009643	yars	100	78.450	ENSSSCG00000030369	YARS	100	78.261	Sus_scrofa
ENSCSEG00000009643	yars	98	77.543	ENSTGUG00000001342	YARS	98	76.775	Taeniopygia_guttata
ENSCSEG00000009643	yars	99	87.713	ENSTRUG00000014099	yars	99	87.121	Takifugu_rubripes
ENSCSEG00000009643	yars	99	85.417	ENSTNIG00000009237	yars	99	85.606	Tetraodon_nigroviridis
ENSCSEG00000009643	yars	96	71.176	ENSTBEG00000014374	YARS	100	71.176	Tupaia_belangeri
ENSCSEG00000009643	yars	100	77.883	ENSTTRG00000014987	YARS	100	77.694	Tursiops_truncatus
ENSCSEG00000009643	yars	100	75.992	ENSUAMG00000000392	YARS	100	73.823	Ursus_americanus
ENSCSEG00000009643	yars	100	71.215	ENSUMAG00000008312	YARS	93	70.841	Ursus_maritimus
ENSCSEG00000009643	yars	100	68.302	ENSVPAG00000010958	YARS	100	68.302	Vicugna_pacos
ENSCSEG00000009643	yars	100	78.450	ENSVVUG00000015468	YARS	99	78.711	Vulpes_vulpes
ENSCSEG00000009643	yars	100	72.779	ENSXETG00000027865	yars	100	72.779	Xenopus_tropicalis
ENSCSEG00000009643	yars	95	87.873	ENSXMAG00000016348	yars	82	88.668	Xiphophorus_maculatus