EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009723 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7797 bases
Position: chr9:13178650-13186446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015153	ResIII	PF04851.15	1.6e-07	1	1
ENSCSEP00000015177	ResIII	PF04851.15	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015335	-	924	-	ENSCSEP00000015153	307 (aa)	-	-
ENSCSET00000015360	-	1920	-	ENSCSEP00000015177	639 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000009723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009723	-	64	30.932	ENSCSEG00000001983	rad54l	65	30.932
ENSCSEG00000009723	-	73	32.895	ENSCSEG00000007030	-	92	30.973
ENSCSEG00000009723	-	74	42.623	ENSCSEG00000016985	hells	68	38.175
ENSCSEG00000009723	-	73	35.683	ENSCSEG00000016233	-	65	31.690
ENSCSEG00000009723	-	74	35.510	ENSCSEG00000014419	-	52	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009723	-	92	96.970	ENSG00000127616	SMARCA4	93	76.147	Homo_sapiens
ENSCSEG00000009723	-	92	96.970	ENSDNOG00000048847	SMARCA4	52	72.680	Dasypus_novemcinctus
ENSCSEG00000009723	-	92	96.970	ENSMMUG00000012042	SMARCA4	61	72.632	Macaca_mulatta
ENSCSEG00000009723	-	71	74.751	ENSTGUG00000015488	-	59	74.751	Taeniopygia_guttata