EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000009842 (Gene tree)
Gene ID: 103383987
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3340 bases
Position: chr9:13233066-13236405
Accession: 103383987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015321	RNase_HII	PF01351.18	4.3e-52	1	1
ENSCSEP00000015341	RNase_HII	PF01351.18	1.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015507	-	1064	XM_008317340	ENSCSEP00000015321	306 (aa)	XP_008315562	UPI00049784C8
ENSCSET00000015529	-	870	-	ENSCSEP00000015341	289 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000009842's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009842	rnaseh2a	100	60.131	ENSG00000104889	RNASEH2A	99	66.667	Homo_sapiens
ENSCSEG00000009842	rnaseh2a	100	87.662	ENSAPOG00000004101	rnaseh2a	100	87.662	Acanthochromis_polyacanthus
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSAMEG00000012323	RNASEH2A	100	59.804	Ailuropoda_melanoleuca
ENSCSEG00000009842	rnaseh2a	83	90.588	ENSACIG00000002658	rnaseh2a	100	90.588	Amphilophus_citrinellus
ENSCSEG00000009842	rnaseh2a	100	87.338	ENSAOCG00000009217	rnaseh2a	100	87.338	Amphiprion_ocellaris
ENSCSEG00000009842	rnaseh2a	100	87.338	ENSAPEG00000022937	rnaseh2a	100	87.338	Amphiprion_percula
ENSCSEG00000009842	rnaseh2a	100	86.364	ENSATEG00000000908	rnaseh2a	100	86.364	Anabas_testudineus
ENSCSEG00000009842	rnaseh2a	100	68.078	ENSACAG00000003338	RNASEH2A	100	68.078	Anolis_carolinensis
ENSCSEG00000009842	rnaseh2a	100	45.192	ENSANAG00000037932	RNASEH2A	100	45.192	Aotus_nancymaae
ENSCSEG00000009842	rnaseh2a	100	86.364	ENSACLG00000009169	rnaseh2a	100	86.364	Astatotilapia_calliptera
ENSCSEG00000009842	rnaseh2a	100	73.941	ENSAMXG00000000436	rnaseh2a	100	73.941	Astyanax_mexicanus
ENSCSEG00000009842	rnaseh2a	100	62.701	ENSBTAG00000009661	RNASEH2A	100	62.701	Bos_taurus
ENSCSEG00000009842	rnaseh2a	91	46.809	WBGene00004383	rnh-2	93	46.809	Caenorhabditis_elegans
ENSCSEG00000009842	rnaseh2a	100	59.477	ENSCJAG00000004873	RNASEH2A	100	59.477	Callithrix_jacchus
ENSCSEG00000009842	rnaseh2a	100	60.261	ENSCAFG00000017159	RNASEH2A	100	60.261	Canis_familiaris
ENSCSEG00000009842	rnaseh2a	100	60.261	ENSCAFG00020005190	RNASEH2A	60	60.261	Canis_lupus_dingo
ENSCSEG00000009842	rnaseh2a	100	62.058	ENSCHIG00000014460	RNASEH2A	100	62.058	Capra_hircus
ENSCSEG00000009842	rnaseh2a	100	61.765	ENSTSYG00000025418	RNASEH2A	100	61.765	Carlito_syrichta
ENSCSEG00000009842	rnaseh2a	64	54.315	ENSCAPG00000003411	RNASEH2A	100	54.315	Cavia_aperea
ENSCSEG00000009842	rnaseh2a	100	58.824	ENSCPOG00000038877	RNASEH2A	100	58.824	Cavia_porcellus
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSCCAG00000030453	RNASEH2A	100	59.804	Cebus_capucinus
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSCATG00000029609	RNASEH2A	100	60.458	Cercocebus_atys
ENSCSEG00000009842	rnaseh2a	100	60.131	ENSCLAG00000014930	RNASEH2A	100	60.131	Chinchilla_lanigera
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSCSAG00000006567	RNASEH2A	100	60.458	Chlorocebus_sabaeus
ENSCSEG00000009842	rnaseh2a	99	65.563	ENSCPBG00000023909	RNASEH2A	99	65.563	Chrysemys_picta_bellii
ENSCSEG00000009842	rnaseh2a	98	52.492	ENSCING00000006190	-	98	52.492	Ciona_intestinalis
ENSCSEG00000009842	rnaseh2a	98	51.000	ENSCSAVG00000010904	-	98	51.000	Ciona_savignyi
ENSCSEG00000009842	rnaseh2a	100	60.784	ENSCANG00000027433	RNASEH2A	100	60.784	Colobus_angolensis_palliatus
ENSCSEG00000009842	rnaseh2a	100	60.390	ENSCGRG00001005021	Rnaseh2a	100	60.390	Cricetulus_griseus_chok1gshd
ENSCSEG00000009842	rnaseh2a	100	60.390	ENSCGRG00000016602	Rnaseh2a	93	67.451	Cricetulus_griseus_crigri
ENSCSEG00000009842	rnaseh2a	99	73.443	ENSCVAG00000021203	rnaseh2a	99	73.443	Cyprinodon_variegatus
ENSCSEG00000009842	rnaseh2a	100	84.039	ENSDARG00000018891	rnaseh2a	100	88.732	Danio_rerio
ENSCSEG00000009842	rnaseh2a	86	58.397	ENSDNOG00000036532	RNASEH2A	100	58.397	Dasypus_novemcinctus
ENSCSEG00000009842	rnaseh2a	100	59.477	ENSDORG00000009008	Rnaseh2a	100	59.477	Dipodomys_ordii
ENSCSEG00000009842	rnaseh2a	98	50.492	FBgn0031252	CG13690	87	50.492	Drosophila_melanogaster
ENSCSEG00000009842	rnaseh2a	72	55.869	ENSETEG00000001956	-	100	57.746	Echinops_telfairi
ENSCSEG00000009842	rnaseh2a	94	56.701	ENSEBUG00000003380	rnaseh2a	89	56.701	Eptatretus_burgeri
ENSCSEG00000009842	rnaseh2a	86	66.031	ENSEASG00005004118	RNASEH2A	95	66.031	Equus_asinus_asinus
ENSCSEG00000009842	rnaseh2a	100	60.586	ENSECAG00000007013	RNASEH2A	100	60.586	Equus_caballus
ENSCSEG00000009842	rnaseh2a	100	56.209	ENSEEUG00000008222	RNASEH2A	100	56.209	Erinaceus_europaeus
ENSCSEG00000009842	rnaseh2a	99	81.788	ENSELUG00000023079	rnaseh2a	96	80.567	Esox_lucius
ENSCSEG00000009842	rnaseh2a	100	59.935	ENSFCAG00000000474	RNASEH2A	100	59.935	Felis_catus
ENSCSEG00000009842	rnaseh2a	100	58.900	ENSFDAG00000003595	RNASEH2A	96	66.000	Fukomys_damarensis
ENSCSEG00000009842	rnaseh2a	100	84.314	ENSFHEG00000007682	rnaseh2a	100	84.314	Fundulus_heteroclitus
ENSCSEG00000009842	rnaseh2a	98	80.528	ENSGMOG00000005650	rnaseh2a	98	80.528	Gadus_morhua
ENSCSEG00000009842	rnaseh2a	99	58.416	ENSGALG00000052002	RNASEH2A	72	58.416	Gallus_gallus
ENSCSEG00000009842	rnaseh2a	99	86.093	ENSGAFG00000009624	rnaseh2a	99	86.093	Gambusia_affinis
ENSCSEG00000009842	rnaseh2a	100	84.641	ENSGACG00000016019	rnaseh2a	100	84.641	Gasterosteus_aculeatus
ENSCSEG00000009842	rnaseh2a	99	65.563	ENSGAGG00000013859	RNASEH2A	99	65.563	Gopherus_agassizii
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSGGOG00000005846	RNASEH2A	100	60.458	Gorilla_gorilla
ENSCSEG00000009842	rnaseh2a	95	86.254	ENSHBUG00000005267	rnaseh2a	100	86.254	Haplochromis_burtoni
ENSCSEG00000009842	rnaseh2a	100	58.252	ENSHGLG00000018801	RNASEH2A	100	58.252	Heterocephalus_glaber_female
ENSCSEG00000009842	rnaseh2a	100	58.576	ENSHGLG00100015773	RNASEH2A	100	58.576	Heterocephalus_glaber_male
ENSCSEG00000009842	rnaseh2a	100	82.680	ENSHCOG00000016593	rnaseh2a	100	82.680	Hippocampus_comes
ENSCSEG00000009842	rnaseh2a	100	82.736	ENSIPUG00000024299	rnaseh2a	100	82.736	Ictalurus_punctatus
ENSCSEG00000009842	rnaseh2a	100	60.261	ENSSTOG00000006224	RNASEH2A	99	67.059	Ictidomys_tridecemlineatus
ENSCSEG00000009842	rnaseh2a	100	60.912	ENSJJAG00000017547	Rnaseh2a	100	60.912	Jaculus_jaculus
ENSCSEG00000009842	rnaseh2a	99	85.762	ENSKMAG00000019829	rnaseh2a	99	85.762	Kryptolebias_marmoratus
ENSCSEG00000009842	rnaseh2a	100	82.143	ENSLBEG00000020494	rnaseh2a	100	82.143	Labrus_bergylta
ENSCSEG00000009842	rnaseh2a	83	63.922	ENSLACG00000007789	RNASEH2A	99	63.922	Latimeria_chalumnae
ENSCSEG00000009842	rnaseh2a	99	79.801	ENSLOCG00000007890	rnaseh2a	98	79.801	Lepisosteus_oculatus
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSLAFG00000015571	RNASEH2A	100	59.804	Loxodonta_africana
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSMFAG00000002011	RNASEH2A	100	60.458	Macaca_fascicularis
ENSCSEG00000009842	rnaseh2a	100	60.131	ENSMMUG00000005690	RNASEH2A	100	60.131	Macaca_mulatta
ENSCSEG00000009842	rnaseh2a	100	60.131	ENSMNEG00000033054	RNASEH2A	100	60.131	Macaca_nemestrina
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSMLEG00000043654	RNASEH2A	100	60.458	Mandrillus_leucophaeus
ENSCSEG00000009842	rnaseh2a	100	85.714	ENSMAMG00000003062	rnaseh2a	99	88.339	Mastacembelus_armatus
ENSCSEG00000009842	rnaseh2a	100	85.714	ENSMZEG00005023857	rnaseh2a	100	85.714	Maylandia_zebra
ENSCSEG00000009842	rnaseh2a	55	56.213	ENSMAUG00000021740	-	100	56.213	Mesocricetus_auratus
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSMICG00000016430	RNASEH2A	100	59.804	Microcebus_murinus
ENSCSEG00000009842	rnaseh2a	100	61.165	ENSMOCG00000017408	Rnaseh2a	100	61.165	Microtus_ochrogaster
ENSCSEG00000009842	rnaseh2a	83	85.882	ENSMMOG00000008447	rnaseh2a	100	85.882	Mola_mola
ENSCSEG00000009842	rnaseh2a	99	66.557	ENSMODG00000006997	RNASEH2A	99	66.557	Monodelphis_domestica
ENSCSEG00000009842	rnaseh2a	100	86.688	ENSMALG00000021607	rnaseh2a	100	86.688	Monopterus_albus
ENSCSEG00000009842	rnaseh2a	100	44.156	MGP_CAROLIEiJ_G0031319	-	100	68.519	Mus_caroli
ENSCSEG00000009842	rnaseh2a	100	60.390	ENSMUSG00000052926	Rnaseh2a	100	68.519	Mus_musculus
ENSCSEG00000009842	rnaseh2a	100	58.824	MGP_PahariEiJ_G0022924	Rnaseh2a	100	68.519	Mus_pahari
ENSCSEG00000009842	rnaseh2a	100	61.039	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	68.519	Mus_spretus
ENSCSEG00000009842	rnaseh2a	100	60.912	ENSMPUG00000004586	RNASEH2A	100	60.912	Mustela_putorius_furo
ENSCSEG00000009842	rnaseh2a	100	61.238	ENSMLUG00000012723	RNASEH2A	100	61.238	Myotis_lucifugus
ENSCSEG00000009842	rnaseh2a	100	57.980	ENSNGAG00000017988	Rnaseh2a	100	57.980	Nannospalax_galili
ENSCSEG00000009842	rnaseh2a	100	86.688	ENSNBRG00000018731	rnaseh2a	100	86.688	Neolamprologus_brichardi
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSNLEG00000012806	RNASEH2A	100	60.458	Nomascus_leucogenys
ENSCSEG00000009842	rnaseh2a	70	74.648	ENSMEUG00000006001	RNASEH2A	100	74.648	Notamacropus_eugenii
ENSCSEG00000009842	rnaseh2a	100	49.191	ENSOPRG00000004811	RNASEH2A	100	49.191	Ochotona_princeps
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSODEG00000009772	RNASEH2A	100	59.804	Octodon_degus
ENSCSEG00000009842	rnaseh2a	100	85.714	ENSONIG00000018033	rnaseh2a	99	85.714	Oreochromis_niloticus
ENSCSEG00000009842	rnaseh2a	100	60.784	ENSOANG00000009079	RNASEH2A	100	60.784	Ornithorhynchus_anatinus
ENSCSEG00000009842	rnaseh2a	100	85.621	ENSORLG00000004042	rnaseh2a	100	85.621	Oryzias_latipes
ENSCSEG00000009842	rnaseh2a	100	85.294	ENSORLG00020009483	rnaseh2a	100	85.294	Oryzias_latipes_hni
ENSCSEG00000009842	rnaseh2a	100	85.294	ENSORLG00015007548	rnaseh2a	100	85.294	Oryzias_latipes_hsok
ENSCSEG00000009842	rnaseh2a	100	84.641	ENSOMEG00000016454	rnaseh2a	100	84.641	Oryzias_melastigma
ENSCSEG00000009842	rnaseh2a	100	58.497	ENSOGAG00000012214	RNASEH2A	100	58.497	Otolemur_garnettii
ENSCSEG00000009842	rnaseh2a	100	62.058	ENSOARG00000010721	RNASEH2A	100	62.058	Ovis_aries
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSPPAG00000028092	RNASEH2A	100	60.458	Pan_paniscus
ENSCSEG00000009842	rnaseh2a	100	59.935	ENSPPRG00000010585	RNASEH2A	100	59.935	Panthera_pardus
ENSCSEG00000009842	rnaseh2a	100	59.283	ENSPTIG00000013366	RNASEH2A	100	59.283	Panthera_tigris_altaica
ENSCSEG00000009842	rnaseh2a	100	60.131	ENSPTRG00000010542	RNASEH2A	100	60.131	Pan_troglodytes
ENSCSEG00000009842	rnaseh2a	100	60.458	ENSPANG00000034495	RNASEH2A	100	60.458	Papio_anubis
ENSCSEG00000009842	rnaseh2a	99	79.139	ENSPKIG00000009756	rnaseh2a	99	79.139	Paramormyrops_kingsleyae
ENSCSEG00000009842	rnaseh2a	66	67.164	ENSPSIG00000012039	RNASEH2A	100	67.164	Pelodiscus_sinensis
ENSCSEG00000009842	rnaseh2a	83	85.098	ENSPMGG00000023392	rnaseh2a	100	85.098	Periophthalmus_magnuspinnatus
ENSCSEG00000009842	rnaseh2a	100	60.065	ENSPEMG00000018009	Rnaseh2a	100	60.065	Peromyscus_maniculatus_bairdii
ENSCSEG00000009842	rnaseh2a	98	62.623	ENSPMAG00000009060	rnaseh2a	98	63.607	Petromyzon_marinus
ENSCSEG00000009842	rnaseh2a	99	66.557	ENSPCIG00000014119	RNASEH2A	99	66.557	Phascolarctos_cinereus
ENSCSEG00000009842	rnaseh2a	99	85.762	ENSPFOG00000012627	rnaseh2a	99	82.623	Poecilia_formosa
ENSCSEG00000009842	rnaseh2a	83	89.804	ENSPLAG00000015901	rnaseh2a	100	89.804	Poecilia_latipinna
ENSCSEG00000009842	rnaseh2a	68	81.643	ENSPLAG00000018723	-	90	81.643	Poecilia_latipinna
ENSCSEG00000009842	rnaseh2a	68	81.159	ENSPMEG00000009032	-	93	81.159	Poecilia_mexicana
ENSCSEG00000009842	rnaseh2a	83	89.412	ENSPMEG00000000647	rnaseh2a	100	89.412	Poecilia_mexicana
ENSCSEG00000009842	rnaseh2a	99	83.113	ENSPREG00000015015	rnaseh2a	99	83.113	Poecilia_reticulata
ENSCSEG00000009842	rnaseh2a	100	59.935	ENSPPYG00000009608	RNASEH2A	100	59.935	Pongo_abelii
ENSCSEG00000009842	rnaseh2a	100	60.131	ENSPCAG00000015319	RNASEH2A	100	60.131	Procavia_capensis
ENSCSEG00000009842	rnaseh2a	100	58.497	ENSPCOG00000003686	RNASEH2A	100	58.497	Propithecus_coquereli
ENSCSEG00000009842	rnaseh2a	97	47.099	ENSPVAG00000014703	RNASEH2A	98	47.099	Pteropus_vampyrus
ENSCSEG00000009842	rnaseh2a	100	79.100	ENSPNYG00000023986	rnaseh2a	100	79.100	Pundamilia_nyererei
ENSCSEG00000009842	rnaseh2a	100	82.680	ENSPNAG00000021017	rnaseh2a	100	82.680	Pygocentrus_nattereri
ENSCSEG00000009842	rnaseh2a	100	60.390	ENSRNOG00000003504	Rnaseh2a	100	60.390	Rattus_norvegicus
ENSCSEG00000009842	rnaseh2a	100	60.784	ENSRBIG00000023554	RNASEH2A	100	60.784	Rhinopithecus_bieti
ENSCSEG00000009842	rnaseh2a	100	60.784	ENSRROG00000043799	RNASEH2A	100	60.784	Rhinopithecus_roxellana
ENSCSEG00000009842	rnaseh2a	80	42.857	YNL072W	RNH201	82	42.857	Saccharomyces_cerevisiae
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSSBOG00000033164	RNASEH2A	100	59.804	Saimiri_boliviensis_boliviensis
ENSCSEG00000009842	rnaseh2a	99	64.495	ENSSHAG00000015552	RNASEH2A	99	64.495	Sarcophilus_harrisii
ENSCSEG00000009842	rnaseh2a	99	79.139	ENSSFOG00015009692	rnaseh2a	99	79.139	Scleropages_formosus
ENSCSEG00000009842	rnaseh2a	100	85.714	ENSSMAG00000013986	rnaseh2a	100	85.714	Scophthalmus_maximus
ENSCSEG00000009842	rnaseh2a	92	90.106	ENSSDUG00000005280	rnaseh2a	97	90.106	Seriola_dumerili
ENSCSEG00000009842	rnaseh2a	100	87.987	ENSSLDG00000023766	rnaseh2a	100	87.987	Seriola_lalandi_dorsalis
ENSCSEG00000009842	rnaseh2a	100	87.338	ENSSPAG00000012769	rnaseh2a	100	87.338	Stegastes_partitus
ENSCSEG00000009842	rnaseh2a	100	61.438	ENSSSCG00000013737	RNASEH2A	100	61.438	Sus_scrofa
ENSCSEG00000009842	rnaseh2a	100	80.968	ENSTRUG00000000049	rnaseh2a	100	80.968	Takifugu_rubripes
ENSCSEG00000009842	rnaseh2a	100	78.896	ENSTNIG00000004533	rnaseh2a	99	78.896	Tetraodon_nigroviridis
ENSCSEG00000009842	rnaseh2a	70	68.545	ENSTTRG00000003592	RNASEH2A	100	68.545	Tursiops_truncatus
ENSCSEG00000009842	rnaseh2a	100	59.804	ENSUAMG00000019593	RNASEH2A	99	61.429	Ursus_americanus
ENSCSEG00000009842	rnaseh2a	76	68.103	ENSUMAG00000006254	-	73	68.103	Ursus_maritimus
ENSCSEG00000009842	rnaseh2a	98	70.100	ENSXETG00000004762	rnaseh2a	98	70.100	Xenopus_tropicalis
ENSCSEG00000009842	rnaseh2a	99	84.437	ENSXCOG00000013485	rnaseh2a	99	84.437	Xiphophorus_couchianus
ENSCSEG00000009842	rnaseh2a	99	85.099	ENSXMAG00000006953	rnaseh2a	99	85.099	Xiphophorus_maculatus