EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009845 (Gene tree)
Gene ID: 103392741
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6091 bases
Position: chr17:3928525-3934615
Accession: 103392741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015324	MMR_HSR1	PF01926.23	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015512	-	2905	XM_008329447	ENSCSEP00000015324	179 (aa)	XP_008327669	UPI0004956DD4

Gene Model

Click here to download ENSCSEG00000009845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009845	arl5c	89	40.881	ENSCSEG00000013309	arl3	86	40.881
ENSCSEG00000009845	arl5c	98	70.857	ENSCSEG00000000522	arl8	98	70.857
ENSCSEG00000009845	arl5c	64	30.000	ENSCSEG00000019797	rab22a	61	30.000
ENSCSEG00000009845	arl5c	87	32.692	ENSCSEG00000018609	arl8a	86	32.692
ENSCSEG00000009845	arl5c	100	42.541	ENSCSEG00000016811	arl2	97	42.541
ENSCSEG00000009845	arl5c	98	43.503	ENSCSEG00000006004	arf5	98	43.503
ENSCSEG00000009845	arl5c	94	36.313	ENSCSEG00000013577	arfrp1	89	36.313
ENSCSEG00000009845	arl5c	98	35.912	ENSCSEG00000005784	ARL6	97	35.912
ENSCSEG00000009845	arl5c	89	41.916	ENSCSEG00000000838	arl4cb	76	41.916
ENSCSEG00000009845	arl5c	80	41.611	ENSCSEG00000009161	arl11	91	41.611
ENSCSEG00000009845	arl5c	99	37.433	ENSCSEG00000007479	ARL4A	94	37.433
ENSCSEG00000009845	arl5c	98	45.763	ENSCSEG00000007217	-	98	45.763
ENSCSEG00000009845	arl5c	98	45.763	ENSCSEG00000003101	arf3b	98	45.763
ENSCSEG00000009845	arl5c	92	70.732	ENSCSEG00000003442	arl5a	100	70.732
ENSCSEG00000009845	arl5c	99	37.705	ENSCSEG00000014890	arl4aa	93	37.705
ENSCSEG00000009845	arl5c	96	47.674	ENSCSEG00000012285	-	96	47.674
ENSCSEG00000009845	arl5c	67	31.200	ENSCSEG00000013400	rab35b	61	31.200
ENSCSEG00000009845	arl5c	91	42.353	ENSCSEG00000010194	-	83	42.353
ENSCSEG00000009845	arl5c	89	39.623	ENSCSEG00000018550	-	87	39.623
ENSCSEG00000009845	arl5c	88	42.424	ENSCSEG00000017926	-	80	42.424
ENSCSEG00000009845	arl5c	65	32.258	ENSCSEG00000017026	rab25a	57	32.258
ENSCSEG00000009845	arl5c	97	35.196	ENSCSEG00000013136	-	87	35.196
ENSCSEG00000009845	arl5c	51	31.959	ENSCSEG00000009988	si:dkey-16l2.16	74	31.959
ENSCSEG00000009845	arl5c	93	47.590	ENSCSEG00000009747	arf2b	92	47.590
ENSCSEG00000009845	arl5c	89	42.515	ENSCSEG00000012307	-	83	42.515
ENSCSEG00000009845	arl5c	85	42.138	ENSCSEG00000005387	-	84	42.138
ENSCSEG00000009845	arl5c	89	38.365	ENSCSEG00000010824	arl3l2	85	38.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009845	arl5c	100	83.240	ENSAPOG00000005821	arl5c	100	83.240	Acanthochromis_polyacanthus
ENSCSEG00000009845	arl5c	92	83.537	ENSACIG00000008975	arl5c	91	83.537	Amphilophus_citrinellus
ENSCSEG00000009845	arl5c	100	83.799	ENSAOCG00000010448	arl5c	100	83.799	Amphiprion_ocellaris
ENSCSEG00000009845	arl5c	100	83.799	ENSAPEG00000002699	arl5c	100	83.799	Amphiprion_percula
ENSCSEG00000009845	arl5c	100	82.682	ENSATEG00000000181	arl5c	100	82.682	Anabas_testudineus
ENSCSEG00000009845	arl5c	100	83.240	ENSACLG00000000922	arl5c	100	84.146	Astatotilapia_calliptera
ENSCSEG00000009845	arl5c	100	80.447	ENSAMXG00000031771	arl5c	100	80.447	Astyanax_mexicanus
ENSCSEG00000009845	arl5c	100	83.799	ENSCVAG00000012706	arl5c	100	83.799	Cyprinodon_variegatus
ENSCSEG00000009845	arl5c	100	76.536	ENSDARG00000035719	arl5c	100	76.536	Danio_rerio
ENSCSEG00000009845	arl5c	100	82.123	ENSELUG00000016864	arl5c	100	82.123	Esox_lucius
ENSCSEG00000009845	arl5c	100	84.916	ENSFHEG00000013677	arl5c	100	84.916	Fundulus_heteroclitus
ENSCSEG00000009845	arl5c	100	84.916	ENSGAFG00000002547	arl5c	100	84.916	Gambusia_affinis
ENSCSEG00000009845	arl5c	100	84.916	ENSGACG00000009321	arl5c	100	84.916	Gasterosteus_aculeatus
ENSCSEG00000009845	arl5c	100	83.240	ENSHBUG00000007301	arl5c	100	83.240	Haplochromis_burtoni
ENSCSEG00000009845	arl5c	100	78.212	ENSHCOG00000017576	-	100	78.212	Hippocampus_comes
ENSCSEG00000009845	arl5c	100	79.330	ENSIPUG00000023232	arl5c	100	79.330	Ictalurus_punctatus
ENSCSEG00000009845	arl5c	100	85.475	ENSKMAG00000011323	arl5c	100	85.475	Kryptolebias_marmoratus
ENSCSEG00000009845	arl5c	100	82.123	ENSLBEG00000006177	arl5c	86	82.123	Labrus_bergylta
ENSCSEG00000009845	arl5c	100	84.916	ENSMAMG00000022157	arl5c	100	84.916	Mastacembelus_armatus
ENSCSEG00000009845	arl5c	100	83.240	ENSMZEG00005022925	arl5c	100	83.240	Maylandia_zebra
ENSCSEG00000009845	arl5c	92	84.756	ENSMMOG00000020851	arl5c	96	84.756	Mola_mola
ENSCSEG00000009845	arl5c	92	82.317	ENSMALG00000009306	arl5c	93	82.317	Monopterus_albus
ENSCSEG00000009845	arl5c	100	83.799	ENSNBRG00000020245	arl5c	100	84.756	Neolamprologus_brichardi
ENSCSEG00000009845	arl5c	100	82.682	ENSONIG00000000890	arl5c	99	82.682	Oreochromis_niloticus
ENSCSEG00000009845	arl5c	100	82.682	ENSORLG00000002960	arl5c	100	84.146	Oryzias_latipes
ENSCSEG00000009845	arl5c	100	82.682	ENSORLG00020010074	arl5c	100	84.146	Oryzias_latipes_hni
ENSCSEG00000009845	arl5c	100	82.682	ENSORLG00015002752	arl5c	100	84.146	Oryzias_latipes_hsok
ENSCSEG00000009845	arl5c	97	82.081	ENSOMEG00000021718	arl5c	98	82.081	Oryzias_melastigma
ENSCSEG00000009845	arl5c	100	82.682	ENSPKIG00000021727	arl5c	100	82.682	Paramormyrops_kingsleyae
ENSCSEG00000009845	arl5c	100	85.475	ENSPFOG00000007842	arl5c	99	85.475	Poecilia_formosa
ENSCSEG00000009845	arl5c	100	85.475	ENSPLAG00000002394	arl5c	100	85.475	Poecilia_latipinna
ENSCSEG00000009845	arl5c	91	84.663	ENSPMEG00000000631	arl5c	94	84.663	Poecilia_mexicana
ENSCSEG00000009845	arl5c	100	86.034	ENSPREG00000008730	arl5c	100	86.034	Poecilia_reticulata
ENSCSEG00000009845	arl5c	100	83.240	ENSPNYG00000012720	arl5c	100	84.146	Pundamilia_nyererei
ENSCSEG00000009845	arl5c	100	79.888	ENSPNAG00000002310	arl5c	100	79.888	Pygocentrus_nattereri
ENSCSEG00000009845	arl5c	100	82.123	ENSSFOG00015023529	arl5c	100	82.123	Scleropages_formosus
ENSCSEG00000009845	arl5c	100	84.916	ENSSMAG00000010552	arl5c	100	84.916	Scophthalmus_maximus
ENSCSEG00000009845	arl5c	100	86.034	ENSSDUG00000022640	arl5c	100	86.034	Seriola_dumerili
ENSCSEG00000009845	arl5c	100	86.034	ENSSLDG00000000728	arl5c	100	86.034	Seriola_lalandi_dorsalis
ENSCSEG00000009845	arl5c	100	84.358	ENSSPAG00000007687	arl5c	100	84.358	Stegastes_partitus
ENSCSEG00000009845	arl5c	100	83.240	ENSTRUG00000022814	arl5c	100	83.240	Takifugu_rubripes
ENSCSEG00000009845	arl5c	100	82.123	ENSTNIG00000003015	arl5c	99	82.123	Tetraodon_nigroviridis
ENSCSEG00000009845	arl5c	100	84.916	ENSXCOG00000017380	arl5c	100	84.916	Xiphophorus_couchianus
ENSCSEG00000009845	arl5c	100	84.358	ENSXMAG00000008447	arl5c	100	84.358	Xiphophorus_maculatus