EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009973 (Gene tree)
Gene ID: 103395123
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3843 bases
Position: chr19:8105682-8109524
Accession: 103395123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015502	RRM_1	PF00076.22	4e-33	1	2
ENSCSEP00000015502	RRM_1	PF00076.22	4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015691	-	789	XM_008332712	ENSCSEP00000015502	262 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000009973's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG
csem05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009973	-	74	67.692	ENSCSEG00000015663	srsf9	78	62.814
ENSCSEG00000009973	-	69	52.198	ENSCSEG00000010058	srsf4	74	47.101
ENSCSEG00000009973	-	79	83.173	ENSCSEG00000014272	-	78	83.173
ENSCSEG00000009973	-	69	50.000	ENSCSEG00000008109	srsf5a	58	50.000
ENSCSEG00000009973	-	87	41.365	ENSCSEG00000003801	srsf5b	59	43.386
ENSCSEG00000009973	-	53	42.754	ENSCSEG00000019778	SRSF6	89	39.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009973	-	100	80.303	ENSG00000136450	SRSF1	100	90.769	Homo_sapiens
ENSCSEG00000009973	-	81	89.623	ENSAPOG00000008542	-	81	89.623	Acanthochromis_polyacanthus
ENSCSEG00000009973	-	79	81.731	ENSAPOG00000002748	-	78	81.731	Acanthochromis_polyacanthus
ENSCSEG00000009973	-	81	81.132	ENSAMEG00000002635	SRSF1	78	80.189	Ailuropoda_melanoleuca
ENSCSEG00000009973	-	79	81.731	ENSACIG00000008091	srsf1a	82	81.731	Amphilophus_citrinellus
ENSCSEG00000009973	-	81	89.623	ENSAOCG00000000337	-	81	89.623	Amphiprion_ocellaris
ENSCSEG00000009973	-	79	82.212	ENSAOCG00000010671	-	82	82.212	Amphiprion_ocellaris
ENSCSEG00000009973	-	81	89.623	ENSAPEG00000023352	-	80	89.623	Amphiprion_percula
ENSCSEG00000009973	-	79	82.212	ENSAPEG00000009915	-	82	82.212	Amphiprion_percula
ENSCSEG00000009973	-	79	82.212	ENSATEG00000022403	-	77	82.212	Anabas_testudineus
ENSCSEG00000009973	-	84	80.365	ENSATEG00000021567	-	81	83.962	Anabas_testudineus
ENSCSEG00000009973	-	81	82.075	ENSACAG00000005542	-	79	83.019	Anolis_carolinensis
ENSCSEG00000009973	-	100	80.303	ENSANAG00000020583	-	99	88.889	Aotus_nancymaae
ENSCSEG00000009973	-	95	80.000	ENSAMXG00000035996	srsf1a	79	84.211	Astyanax_mexicanus
ENSCSEG00000009973	-	56	80.519	ENSAMXG00000024373	-	71	69.006	Astyanax_mexicanus
ENSCSEG00000009973	-	100	80.303	ENSBTAG00000014766	SRSF1	79	83.962	Bos_taurus
ENSCSEG00000009973	-	81	76.303	ENSCJAG00000008111	-	87	77.358	Callithrix_jacchus
ENSCSEG00000009973	-	100	80.303	ENSCJAG00000041713	-	99	88.889	Callithrix_jacchus
ENSCSEG00000009973	-	100	80.303	ENSCAFG00000017430	SRSF1	77	83.962	Canis_familiaris
ENSCSEG00000009973	-	100	80.303	ENSCAFG00020025632	-	77	83.962	Canis_lupus_dingo
ENSCSEG00000009973	-	81	83.019	ENSCHIG00000010787	SRSF1	79	83.962	Capra_hircus
ENSCSEG00000009973	-	100	80.303	ENSTSYG00000013899	-	99	88.889	Carlito_syrichta
ENSCSEG00000009973	-	100	80.303	ENSCPOG00000032681	-	79	83.962	Cavia_porcellus
ENSCSEG00000009973	-	100	80.303	ENSCCAG00000029484	-	99	88.889	Cebus_capucinus
ENSCSEG00000009973	-	100	80.303	ENSCATG00000042294	-	99	88.889	Cercocebus_atys
ENSCSEG00000009973	-	100	80.303	ENSCLAG00000014707	-	79	83.962	Chinchilla_lanigera
ENSCSEG00000009973	-	100	79.545	ENSCSAG00000005642	-	77	83.019	Chlorocebus_sabaeus
ENSCSEG00000009973	-	81	83.019	ENSCHOG00000001899	SRSF1	79	83.962	Choloepus_hoffmanni
ENSCSEG00000009973	-	100	79.924	ENSCPBG00000009851	-	79	83.491	Chrysemys_picta_bellii
ENSCSEG00000009973	-	100	80.303	ENSCANG00000029726	-	99	88.889	Colobus_angolensis_palliatus
ENSCSEG00000009973	-	100	80.303	ENSCGRG00001000670	Srsf1	77	83.962	Cricetulus_griseus_chok1gshd
ENSCSEG00000009973	-	100	80.303	ENSCGRG00000005590	Srsf1	79	83.962	Cricetulus_griseus_crigri
ENSCSEG00000009973	-	80	84.211	ENSCVAG00000005458	-	93	82.587	Cyprinodon_variegatus
ENSCSEG00000009973	-	79	82.212	ENSCVAG00000018617	-	78	82.212	Cyprinodon_variegatus
ENSCSEG00000009973	-	80	82.297	ENSDARG00000017843	srsf1b	79	83.254	Danio_rerio
ENSCSEG00000009973	-	80	86.124	ENSDARG00000057691	srsf1a	99	86.802	Danio_rerio
ENSCSEG00000009973	-	100	80.303	ENSDNOG00000011737	-	77	83.962	Dasypus_novemcinctus
ENSCSEG00000009973	-	100	80.303	ENSDORG00000015082	Srsf1	79	83.962	Dipodomys_ordii
ENSCSEG00000009973	-	76	82.500	ENSETEG00000005349	-	63	84.500	Echinops_telfairi
ENSCSEG00000009973	-	100	80.303	ENSEASG00005002922	-	77	83.962	Equus_asinus_asinus
ENSCSEG00000009973	-	81	83.019	ENSECAG00000016654	SRSF1	79	83.962	Equus_caballus
ENSCSEG00000009973	-	76	83.500	ENSEEUG00000009255	-	63	85.500	Erinaceus_europaeus
ENSCSEG00000009973	-	80	81.340	ENSELUG00000021646	srsf1a	76	80.861	Esox_lucius
ENSCSEG00000009973	-	100	80.303	ENSFCAG00000002250	-	92	83.500	Felis_catus
ENSCSEG00000009973	-	73	92.982	ENSFALG00000005062	-	78	66.197	Ficedula_albicollis
ENSCSEG00000009973	-	100	80.303	ENSFDAG00000010646	-	79	83.962	Fukomys_damarensis
ENSCSEG00000009973	-	79	82.212	ENSFHEG00000003174	srsf1a	82	81.731	Fundulus_heteroclitus
ENSCSEG00000009973	-	92	78.512	ENSGMOG00000014787	-	80	78.846	Gadus_morhua
ENSCSEG00000009973	-	81	82.547	ENSGALG00000005525	SRSF1	79	83.491	Gallus_gallus
ENSCSEG00000009973	-	81	80.660	ENSGACG00000020621	srsf1b	79	80.189	Gasterosteus_aculeatus
ENSCSEG00000009973	-	100	79.924	ENSGAGG00000022965	-	77	83.491	Gopherus_agassizii
ENSCSEG00000009973	-	100	80.303	ENSGGOG00000004386	SRSF1	99	88.889	Gorilla_gorilla
ENSCSEG00000009973	-	79	81.731	ENSHBUG00000016788	srsf1a	80	81.731	Haplochromis_burtoni
ENSCSEG00000009973	-	68	81.006	ENSHGLG00000000669	-	76	82.123	Heterocephalus_glaber_female
ENSCSEG00000009973	-	68	81.006	ENSHGLG00000000600	-	76	82.123	Heterocephalus_glaber_female
ENSCSEG00000009973	-	100	80.303	ENSHGLG00100016906	-	79	83.962	Heterocephalus_glaber_male
ENSCSEG00000009973	-	79	80.769	ENSHCOG00000018918	srsf1a	77	81.731	Hippocampus_comes
ENSCSEG00000009973	-	81	81.604	ENSIPUG00000008750	srsf1b	80	82.547	Ictalurus_punctatus
ENSCSEG00000009973	-	94	80.321	ENSIPUG00000017039	srsf1a	79	84.135	Ictalurus_punctatus
ENSCSEG00000009973	-	100	80.303	ENSSTOG00000000243	-	96	80.769	Ictidomys_tridecemlineatus
ENSCSEG00000009973	-	100	80.303	ENSJJAG00000000102	-	79	83.962	Jaculus_jaculus
ENSCSEG00000009973	-	55	74.126	ENSJJAG00000014464	-	95	72.727	Jaculus_jaculus
ENSCSEG00000009973	-	79	81.731	ENSKMAG00000019232	srsf1a	78	81.731	Kryptolebias_marmoratus
ENSCSEG00000009973	-	81	79.717	ENSLBEG00000015294	-	80	82.075	Labrus_bergylta
ENSCSEG00000009973	-	79	81.250	ENSLBEG00000020864	-	82	81.250	Labrus_bergylta
ENSCSEG00000009973	-	80	81.818	ENSLACG00000014160	srsf1a	72	81.818	Latimeria_chalumnae
ENSCSEG00000009973	-	81	82.075	ENSLOCG00000005994	srsf1a	79	83.019	Lepisosteus_oculatus
ENSCSEG00000009973	-	81	83.019	ENSLAFG00000025743	SRSF1	79	83.962	Loxodonta_africana
ENSCSEG00000009973	-	100	80.303	ENSMFAG00000040003	-	99	88.889	Macaca_fascicularis
ENSCSEG00000009973	-	100	77.652	ENSMMUG00000003260	-	95	80.660	Macaca_mulatta
ENSCSEG00000009973	-	100	80.303	ENSMMUG00000004725	SRSF1	99	88.889	Macaca_mulatta
ENSCSEG00000009973	-	100	77.273	ENSMNEG00000015983	-	77	80.660	Macaca_nemestrina
ENSCSEG00000009973	-	100	80.303	ENSMNEG00000027680	-	99	88.889	Macaca_nemestrina
ENSCSEG00000009973	-	81	83.019	ENSMLEG00000040509	SRSF1	79	83.962	Mandrillus_leucophaeus
ENSCSEG00000009973	-	100	76.136	ENSMLEG00000015243	-	77	78.302	Mandrillus_leucophaeus
ENSCSEG00000009973	-	79	82.212	ENSMAMG00000018454	-	78	82.212	Mastacembelus_armatus
ENSCSEG00000009973	-	81	81.604	ENSMAMG00000019687	-	79	83.962	Mastacembelus_armatus
ENSCSEG00000009973	-	81	83.962	ENSMAMG00000019691	-	81	83.962	Mastacembelus_armatus
ENSCSEG00000009973	-	100	80.303	ENSMAUG00000021845	Srsf1	79	83.962	Mesocricetus_auratus
ENSCSEG00000009973	-	100	80.303	ENSMICG00000013639	-	99	88.889	Microcebus_murinus
ENSCSEG00000009973	-	100	80.303	ENSMOCG00000001996	Srsf1	79	83.962	Microtus_ochrogaster
ENSCSEG00000009973	-	79	80.769	ENSMMOG00000014354	srsf1a	82	80.769	Mola_mola
ENSCSEG00000009973	-	76	84.500	ENSMODG00000014781	-	63	84.500	Monodelphis_domestica
ENSCSEG00000009973	-	79	81.731	ENSMALG00000017129	-	75	81.731	Monopterus_albus
ENSCSEG00000009973	-	100	80.303	MGP_CAROLIEiJ_G0016943	Srsf1	92	83.500	Mus_caroli
ENSCSEG00000009973	-	100	80.303	ENSMUSG00000018379	Srsf1	92	83.500	Mus_musculus
ENSCSEG00000009973	-	100	80.303	MGP_PahariEiJ_G0018074	Srsf1	75	96.203	Mus_pahari
ENSCSEG00000009973	-	100	80.303	MGP_SPRETEiJ_G0017790	Srsf1	92	83.500	Mus_spretus
ENSCSEG00000009973	-	81	83.019	ENSMPUG00000015369	SRSF1	79	83.962	Mustela_putorius_furo
ENSCSEG00000009973	-	81	83.019	ENSMLUG00000011040	SRSF1	79	83.962	Myotis_lucifugus
ENSCSEG00000009973	-	84	76.256	ENSMLUG00000023995	-	79	77.830	Myotis_lucifugus
ENSCSEG00000009973	-	81	83.019	ENSNGAG00000011395	Srsf1	79	83.962	Nannospalax_galili
ENSCSEG00000009973	-	100	72.519	ENSNBRG00000008041	srsf1b	79	73.113	Neolamprologus_brichardi
ENSCSEG00000009973	-	100	80.303	ENSNLEG00000008088	-	99	88.889	Nomascus_leucogenys
ENSCSEG00000009973	-	54	78.873	ENSMEUG00000002783	-	100	78.873	Notamacropus_eugenii
ENSCSEG00000009973	-	56	79.592	ENSOPRG00000001234	-	72	80.952	Ochotona_princeps
ENSCSEG00000009973	-	99	80.228	ENSODEG00000011481	-	79	83.491	Octodon_degus
ENSCSEG00000009973	-	82	82.870	ENSONIG00000004860	-	80	83.019	Oreochromis_niloticus
ENSCSEG00000009973	-	79	81.731	ENSONIG00000013160	-	77	81.731	Oreochromis_niloticus
ENSCSEG00000009973	-	100	61.940	ENSOCUG00000010894	-	78	63.426	Oryctolagus_cuniculus
ENSCSEG00000009973	-	79	82.212	ENSORLG00000004580	srsf1a	78	82.212	Oryzias_latipes
ENSCSEG00000009973	-	79	82.212	ENSORLG00020009456	srsf1a	82	82.212	Oryzias_latipes_hni
ENSCSEG00000009973	-	79	82.212	ENSORLG00015014384	srsf1a	82	82.212	Oryzias_latipes_hsok
ENSCSEG00000009973	-	73	80.105	ENSOMEG00000004106	srsf1a	71	80.105	Oryzias_melastigma
ENSCSEG00000009973	-	93	77.366	ENSOGAG00000025950	-	79	83.962	Otolemur_garnettii
ENSCSEG00000009973	-	81	78.302	ENSOARG00000008323	SRSF1	78	80.189	Ovis_aries
ENSCSEG00000009973	-	100	80.303	ENSPPAG00000043403	-	99	88.889	Pan_paniscus
ENSCSEG00000009973	-	100	80.303	ENSPPRG00000004238	-	92	83.500	Panthera_pardus
ENSCSEG00000009973	-	100	80.303	ENSPTRG00000049077	SRSF1	99	88.889	Pan_troglodytes
ENSCSEG00000009973	-	100	80.303	ENSPANG00000022305	-	99	88.889	Papio_anubis
ENSCSEG00000009973	-	100	64.122	ENSPANG00000030275	-	75	60.563	Papio_anubis
ENSCSEG00000009973	-	81	81.604	ENSPKIG00000012857	srsf1b	80	82.547	Paramormyrops_kingsleyae
ENSCSEG00000009973	-	80	79.904	ENSPKIG00000007204	srsf1a	82	80.769	Paramormyrops_kingsleyae
ENSCSEG00000009973	-	81	76.636	ENSPSIG00000009000	-	79	77.570	Pelodiscus_sinensis
ENSCSEG00000009973	-	79	82.692	ENSPMGG00000013112	-	79	83.163	Periophthalmus_magnuspinnatus
ENSCSEG00000009973	-	81	80.189	ENSPMGG00000005467	-	78	82.212	Periophthalmus_magnuspinnatus
ENSCSEG00000009973	-	100	80.303	ENSPEMG00000021416	Srsf1	79	83.962	Peromyscus_maniculatus_bairdii
ENSCSEG00000009973	-	81	83.962	ENSPCIG00000006076	-	79	84.906	Phascolarctos_cinereus
ENSCSEG00000009973	-	81	83.568	ENSPFOG00000018325	-	70	83.732	Poecilia_formosa
ENSCSEG00000009973	-	81	83.568	ENSPLAG00000008416	srsf1b	79	83.732	Poecilia_latipinna
ENSCSEG00000009973	-	81	83.568	ENSPMEG00000002388	-	79	83.732	Poecilia_mexicana
ENSCSEG00000009973	-	53	76.978	ENSPMEG00000020607	-	98	76.978	Poecilia_mexicana
ENSCSEG00000009973	-	53	76.978	ENSPMEG00000014312	-	98	76.978	Poecilia_mexicana
ENSCSEG00000009973	-	79	82.212	ENSPREG00000009667	srsf1a	78	82.212	Poecilia_reticulata
ENSCSEG00000009973	-	100	80.303	ENSPPYG00000008240	SRSF1	79	83.962	Pongo_abelii
ENSCSEG00000009973	-	81	83.019	ENSPCAG00000005199	SRSF1	79	83.962	Procavia_capensis
ENSCSEG00000009973	-	82	68.837	ENSPCOG00000025736	-	95	67.925	Propithecus_coquereli
ENSCSEG00000009973	-	100	80.303	ENSPCOG00000023654	-	99	88.889	Propithecus_coquereli
ENSCSEG00000009973	-	51	94.203	ENSPVAG00000000519	-	54	94.203	Pteropus_vampyrus
ENSCSEG00000009973	-	81	79.717	ENSPNAG00000014601	srsf1b	79	81.132	Pygocentrus_nattereri
ENSCSEG00000009973	-	95	78.000	ENSPNAG00000022241	srsf1a	78	79.904	Pygocentrus_nattereri
ENSCSEG00000009973	-	81	83.019	ENSRNOG00000050323	Srsf1	79	83.962	Rattus_norvegicus
ENSCSEG00000009973	-	100	80.303	ENSRBIG00000034445	-	99	88.889	Rhinopithecus_bieti
ENSCSEG00000009973	-	100	80.303	ENSRROG00000041506	-	99	88.889	Rhinopithecus_roxellana
ENSCSEG00000009973	-	100	80.303	ENSSBOG00000025377	-	99	88.889	Saimiri_boliviensis_boliviensis
ENSCSEG00000009973	-	81	83.962	ENSSHAG00000002552	-	79	84.906	Sarcophilus_harrisii
ENSCSEG00000009973	-	81	81.991	ENSSFOG00015004800	srsf1a	78	81.517	Scleropages_formosus
ENSCSEG00000009973	-	81	87.736	ENSSMAG00000009719	-	80	87.736	Scophthalmus_maximus
ENSCSEG00000009973	-	79	80.769	ENSSMAG00000007018	-	78	80.769	Scophthalmus_maximus
ENSCSEG00000009973	-	100	70.611	ENSSDUG00000003929	-	83	75.472	Seriola_dumerili
ENSCSEG00000009973	-	79	81.250	ENSSDUG00000011303	-	82	81.250	Seriola_dumerili
ENSCSEG00000009973	-	95	70.400	ENSSLDG00000016895	-	78	76.847	Seriola_lalandi_dorsalis
ENSCSEG00000009973	-	81	76.995	ENSSLDG00000016868	-	77	70.892	Seriola_lalandi_dorsalis
ENSCSEG00000009973	-	79	81.250	ENSSLDG00000010543	-	78	81.250	Seriola_lalandi_dorsalis
ENSCSEG00000009973	-	76	83.500	ENSSARG00000010949	-	63	85.500	Sorex_araneus
ENSCSEG00000009973	-	100	79.924	ENSSPUG00000000804	-	93	83.000	Sphenodon_punctatus
ENSCSEG00000009973	-	79	82.692	ENSSPAG00000022562	-	78	82.692	Stegastes_partitus
ENSCSEG00000009973	-	81	92.453	ENSSPAG00000014152	-	81	92.453	Stegastes_partitus
ENSCSEG00000009973	-	100	80.303	ENSSSCG00000017626	-	79	83.962	Sus_scrofa
ENSCSEG00000009973	-	56	79.054	ENSTGUG00000008416	-	72	80.405	Taeniopygia_guttata
ENSCSEG00000009973	-	79	81.731	ENSTRUG00000003691	srsf1a	78	81.731	Takifugu_rubripes
ENSCSEG00000009973	-	79	81.731	ENSTNIG00000016223	srsf1a	77	81.731	Tetraodon_nigroviridis
ENSCSEG00000009973	-	76	82.000	ENSTBEG00000015378	-	63	84.000	Tupaia_belangeri
ENSCSEG00000009973	-	56	79.592	ENSTTRG00000007310	SRSF1	72	80.952	Tursiops_truncatus
ENSCSEG00000009973	-	81	83.019	ENSUAMG00000009858	SRSF1	79	83.962	Ursus_americanus
ENSCSEG00000009973	-	100	80.303	ENSUMAG00000000455	-	77	83.962	Ursus_maritimus
ENSCSEG00000009973	-	81	82.547	ENSVPAG00000010094	SRSF1	79	83.491	Vicugna_pacos
ENSCSEG00000009973	-	100	80.303	ENSVVUG00000011882	-	77	83.962	Vulpes_vulpes
ENSCSEG00000009973	-	81	90.233	ENSXETG00000008954	srsf1	81	90.698	Xenopus_tropicalis
ENSCSEG00000009973	-	79	82.212	ENSXMAG00000011766	srsf1a	78	82.212	Xiphophorus_maculatus