EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000009988 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 1407 bases
Position: chr17:13303017-13304423
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015540	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015729	-	396	-	ENSCSEP00000015540	131 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000009988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000009988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000009988	si:dkey-16l2.16	82	50.000	ENSCSEG00000017211	rab2a	51	50.000
ENSCSEG00000009988	si:dkey-16l2.16	77	44.554	ENSCSEG00000019797	rab22a	52	44.554
ENSCSEG00000009988	si:dkey-16l2.16	89	51.282	ENSCSEG00000003768	rab15	50	51.282
ENSCSEG00000009988	si:dkey-16l2.16	83	52.294	ENSCSEG00000007292	rab30	54	52.294
ENSCSEG00000009988	si:dkey-16l2.16	79	33.654	ENSCSEG00000005737	kras	55	33.654
ENSCSEG00000009988	si:dkey-16l2.16	82	50.000	ENSCSEG00000010402	-	50	50.000
ENSCSEG00000009988	si:dkey-16l2.16	82	50.000	ENSCSEG00000011982	rab25b	50	50.000
ENSCSEG00000009988	si:dkey-16l2.16	89	84.483	ENSCSEG00000013400	rab35b	58	84.483
ENSCSEG00000009988	si:dkey-16l2.16	74	37.113	ENSCSEG00000010565	rab23	58	35.593
ENSCSEG00000009988	si:dkey-16l2.16	83	50.459	ENSCSEG00000007239	-	50	50.459
ENSCSEG00000009988	si:dkey-16l2.16	82	48.598	ENSCSEG00000017026	rab25a	51	48.598
ENSCSEG00000009988	si:dkey-16l2.16	87	71.304	ENSCSEG00000014416	zgc:171927	54	71.304
ENSCSEG00000009988	si:dkey-16l2.16	82	33.636	ENSCSEG00000009987	rras2	54	33.636
ENSCSEG00000009988	si:dkey-16l2.16	87	49.123	ENSCSEG00000012149	rab11bb	52	49.123
ENSCSEG00000009988	si:dkey-16l2.16	80	69.524	ENSCSEG00000018732	rab1ba	51	70.588
ENSCSEG00000009988	si:dkey-16l2.16	74	31.959	ENSCSEG00000013309	arl3	50	31.959
ENSCSEG00000009988	si:dkey-16l2.16	68	34.831	ENSCSEG00000003442	arl5a	51	34.831
ENSCSEG00000009988	si:dkey-16l2.16	76	59.596	ENSCSEG00000016803	rab18b	51	59.596
ENSCSEG00000009988	si:dkey-16l2.16	83	52.294	ENSCSEG00000007383	rab11a	51	52.294
ENSCSEG00000009988	si:dkey-16l2.16	79	33.654	ENSCSEG00000007927	hrasb	54	33.654
ENSCSEG00000009988	si:dkey-16l2.16	81	52.830	ENSCSEG00000000205	RAB15	51	52.830
ENSCSEG00000009988	si:dkey-16l2.16	66	36.047	ENSCSEG00000015746	-	67	35.714
ENSCSEG00000009988	si:dkey-16l2.16	87	48.246	ENSCSEG00000011996	rab11al	58	48.246
ENSCSEG00000009988	si:dkey-16l2.16	74	31.959	ENSCSEG00000009845	arl5c	51	31.959
ENSCSEG00000009988	si:dkey-16l2.16	85	54.955	ENSCSEG00000002358	rab13	56	54.955
ENSCSEG00000009988	si:dkey-16l2.16	78	59.804	ENSCSEG00000011816	rab18a	50	59.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSAPOG00000008263	si:dkey-16l2.16	56	96.610	Acanthochromis_polyacanthus
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSAOCG00000016825	si:dkey-16l2.16	56	97.458	Amphiprion_ocellaris
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSAPEG00000006500	si:dkey-16l2.16	56	97.458	Amphiprion_percula
ENSCSEG00000009988	si:dkey-16l2.16	90	98.305	ENSATEG00000019238	si:dkey-16l2.16	56	98.305	Anabas_testudineus
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSACLG00000018721	si:dkey-16l2.16	56	97.458	Astatotilapia_calliptera
ENSCSEG00000009988	si:dkey-16l2.16	92	98.333	ENSAMXG00000038243	si:dkey-16l2.16	95	98.333	Astyanax_mexicanus
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSCVAG00000003537	si:dkey-16l2.16	56	96.610	Cyprinodon_variegatus
ENSCSEG00000009988	si:dkey-16l2.16	91	97.479	ENSDARG00000037967	si:dkey-16l2.16	100	97.479	Danio_rerio
ENSCSEG00000009988	si:dkey-16l2.16	89	94.872	ENSELUG00000023247	si:dkey-16l2.16	56	94.872	Esox_lucius
ENSCSEG00000009988	si:dkey-16l2.16	91	94.118	ENSFHEG00000000767	si:dkey-16l2.16	77	93.277	Fundulus_heteroclitus
ENSCSEG00000009988	si:dkey-16l2.16	90	94.958	ENSGMOG00000015174	si:dkey-16l2.16	73	94.958	Gadus_morhua
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSGAFG00000005388	si:dkey-16l2.16	56	96.610	Gambusia_affinis
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSGACG00000014915	si:dkey-16l2.16	55	96.610	Gasterosteus_aculeatus
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSHBUG00000019261	si:dkey-16l2.16	56	97.458	Haplochromis_burtoni
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSHCOG00000006538	si:dkey-16l2.16	56	96.610	Hippocampus_comes
ENSCSEG00000009988	si:dkey-16l2.16	91	94.118	ENSKMAG00000003494	si:dkey-16l2.16	57	94.118	Kryptolebias_marmoratus
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSLBEG00000007681	si:dkey-16l2.16	56	97.458	Labrus_bergylta
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSMAMG00000019230	si:dkey-16l2.16	56	96.610	Mastacembelus_armatus
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSMZEG00005002081	si:dkey-16l2.16	56	97.458	Maylandia_zebra
ENSCSEG00000009988	si:dkey-16l2.16	88	96.522	ENSMMOG00000020140	si:dkey-16l2.16	54	96.522	Mola_mola
ENSCSEG00000009988	si:dkey-16l2.16	90	95.763	ENSMALG00000014727	si:dkey-16l2.16	56	95.763	Monopterus_albus
ENSCSEG00000009988	si:dkey-16l2.16	90	98.305	ENSNBRG00000008930	si:dkey-16l2.16	56	98.305	Neolamprologus_brichardi
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSONIG00000009443	si:dkey-16l2.16	56	97.458	Oreochromis_niloticus
ENSCSEG00000009988	si:dkey-16l2.16	90	93.220	ENSORLG00000001098	si:dkey-16l2.16	56	93.220	Oryzias_latipes
ENSCSEG00000009988	si:dkey-16l2.16	90	93.220	ENSORLG00020000867	si:dkey-16l2.16	56	93.220	Oryzias_latipes_hni
ENSCSEG00000009988	si:dkey-16l2.16	90	94.068	ENSOMEG00000015474	si:dkey-16l2.16	57	94.068	Oryzias_melastigma
ENSCSEG00000009988	si:dkey-16l2.16	90	94.915	ENSPKIG00000005686	-	56	94.915	Paramormyrops_kingsleyae
ENSCSEG00000009988	si:dkey-16l2.16	90	91.525	ENSPKIG00000018888	si:dkey-16l2.16	56	91.525	Paramormyrops_kingsleyae
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSPMGG00000000751	si:dkey-16l2.16	56	96.610	Periophthalmus_magnuspinnatus
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSPFOG00000004746	si:dkey-16l2.16	56	96.610	Poecilia_formosa
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSPLAG00000021043	si:dkey-16l2.16	56	96.610	Poecilia_latipinna
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSPMEG00000007165	si:dkey-16l2.16	56	96.610	Poecilia_mexicana
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSPREG00000005323	si:dkey-16l2.16	56	96.610	Poecilia_reticulata
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSPNYG00000009490	si:dkey-16l2.16	56	97.458	Pundamilia_nyererei
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSPNAG00000018986	si:dkey-16l2.16	56	96.610	Pygocentrus_nattereri
ENSCSEG00000009988	si:dkey-16l2.16	90	95.763	ENSSFOG00015021448	-	56	95.763	Scleropages_formosus
ENSCSEG00000009988	si:dkey-16l2.16	90	89.831	ENSSFOG00015006414	-	60	89.831	Scleropages_formosus
ENSCSEG00000009988	si:dkey-16l2.16	87	96.491	ENSSMAG00000011769	si:dkey-16l2.16	52	96.491	Scophthalmus_maximus
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSSDUG00000005719	si:dkey-16l2.16	56	96.610	Seriola_dumerili
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSSLDG00000003631	si:dkey-16l2.16	56	96.610	Seriola_lalandi_dorsalis
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSSPAG00000006302	si:dkey-16l2.16	56	97.458	Stegastes_partitus
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSTRUG00000025076	si:dkey-16l2.16	94	97.458	Takifugu_rubripes
ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	ENSTNIG00000011300	si:dkey-16l2.16	56	97.458	Tetraodon_nigroviridis
ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	ENSXMAG00000021767	si:dkey-16l2.16	56	96.610	Xiphophorus_maculatus