EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010020 (Gene tree)
Gene ID: 103387499
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 16418 bases
Position: chr12:11558073-11574490
Accession: 103387499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015578	KH_1	PF00013.29	2.5e-55	1	3
ENSCSEP00000015578	KH_1	PF00013.29	2.5e-55	2	3
ENSCSEP00000015578	KH_1	PF00013.29	2.5e-55	3	3
ENSCSEP00000015599	KH_1	PF00013.29	8.7e-55	1	3
ENSCSEP00000015599	KH_1	PF00013.29	8.7e-55	2	3
ENSCSEP00000015599	KH_1	PF00013.29	8.7e-55	3	3
ENSCSEP00000015640	KH_1	PF00013.29	6.5e-37	1	2
ENSCSEP00000015640	KH_1	PF00013.29	6.5e-37	2	2
ENSCSEP00000015640	KH_2	PF07650.17	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015769	-	2552	XM_017037447	ENSCSEP00000015578	326 (aa)	XP_016892936	UPI0007DC86F0
ENSCSET00000015830	-	1661	-	ENSCSEP00000015640	237 (aa)	-	-
ENSCSET00000015790	-	2589	XM_008322175	ENSCSEP00000015599	434 (aa)	XP_008320397	UPI0004950996

Gene Model

Click here to download ENSCSEG00000010020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010020	zgc:110045	97	69.444	ENSCSEG00000010540	PCBP2	98	69.444
ENSCSEG00000010020	zgc:110045	70	38.571	ENSCSEG00000011429	khsrp	58	39.394
ENSCSEG00000010020	zgc:110045	78	44.286	ENSCSEG00000001024	hnrpkl	57	46.269
ENSCSEG00000010020	zgc:110045	93	30.657	ENSCSEG00000013968	igf2bp1	58	30.657
ENSCSEG00000010020	zgc:110045	74	43.836	ENSCSEG00000012457	hnrnpk	69	43.836
ENSCSEG00000010020	zgc:110045	93	43.056	ENSCSEG00000017718	nova1	59	44.615
ENSCSEG00000010020	zgc:110045	89	38.095	ENSCSEG00000008761	-	64	38.095
ENSCSEG00000010020	zgc:110045	92	32.484	ENSCSEG00000011718	igf2bp2b	64	32.484
ENSCSEG00000010020	zgc:110045	90	43.077	ENSCSEG00000005887	NOVA1	59	35.821
ENSCSEG00000010020	zgc:110045	87	71.845	ENSCSEG00000016984	-	98	61.671
ENSCSEG00000010020	zgc:110045	97	63.043	ENSCSEG00000021490	pcbp2	97	63.043
ENSCSEG00000010020	zgc:110045	97	32.117	ENSCSEG00000012106	igf2bp3	60	32.117
ENSCSEG00000010020	zgc:110045	73	44.286	ENSCSEG00000011661	-	53	44.286
ENSCSEG00000010020	zgc:110045	70	41.538	ENSCSEG00000021412	fubp1	59	41.538
ENSCSEG00000010020	zgc:110045	94	71.661	ENSCSEG00000000822	pcbp3	96	71.661
ENSCSEG00000010020	zgc:110045	90	38.095	ENSCSEG00000017815	FUBP3	71	38.095
ENSCSEG00000010020	zgc:110045	96	53.916	ENSCSEG00000021041	PCBP4	98	50.000
ENSCSEG00000010020	zgc:110045	99	63.265	ENSCSEG00000014487	pcbp4	95	56.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010020	zgc:110045	99	75.542	ENSG00000183570	PCBP3	98	69.014	Homo_sapiens
ENSCSEG00000010020	zgc:110045	100	96.626	ENSAPOG00000023735	zgc:110045	100	96.626	Acanthochromis_polyacanthus
ENSCSEG00000010020	zgc:110045	98	91.244	ENSACIG00000002577	zgc:110045	99	91.244	Amphilophus_citrinellus
ENSCSEG00000010020	zgc:110045	89	90.094	ENSAOCG00000005266	zgc:110045	99	90.094	Amphiprion_ocellaris
ENSCSEG00000010020	zgc:110045	100	94.009	ENSAPEG00000000729	zgc:110045	100	94.009	Amphiprion_percula
ENSCSEG00000010020	zgc:110045	97	88.116	ENSATEG00000011191	zgc:110045	100	88.116	Anabas_testudineus
ENSCSEG00000010020	zgc:110045	100	93.318	ENSACLG00000019285	zgc:110045	100	93.318	Astatotilapia_calliptera
ENSCSEG00000010020	zgc:110045	99	75.542	ENSBTAG00000030775	PCBP3	91	75.542	Bos_taurus
ENSCSEG00000010020	zgc:110045	99	71.345	ENSCAFG00000011907	PCBP3	91	71.345	Canis_familiaris
ENSCSEG00000010020	zgc:110045	99	68.805	ENSCHIG00000015841	PCBP3	90	68.805	Capra_hircus
ENSCSEG00000010020	zgc:110045	89	67.660	ENSTSYG00000005254	PCBP3	93	67.660	Carlito_syrichta
ENSCSEG00000010020	zgc:110045	99	55.425	ENSCAPG00000006767	PCBP3	83	55.425	Cavia_aperea
ENSCSEG00000010020	zgc:110045	97	71.893	ENSCPOG00000003648	PCBP3	90	71.893	Cavia_porcellus
ENSCSEG00000010020	zgc:110045	99	75.232	ENSCCAG00000024561	PCBP3	91	75.232	Cebus_capucinus
ENSCSEG00000010020	zgc:110045	99	75.542	ENSCATG00000038419	PCBP3	91	75.542	Cercocebus_atys
ENSCSEG00000010020	zgc:110045	97	71.893	ENSCLAG00000006667	PCBP3	90	71.893	Chinchilla_lanigera
ENSCSEG00000010020	zgc:110045	99	75.542	ENSCANG00000026757	PCBP3	91	75.542	Colobus_angolensis_palliatus
ENSCSEG00000010020	zgc:110045	97	71.893	ENSCGRG00001006836	Pcbp3	90	71.893	Cricetulus_griseus_chok1gshd
ENSCSEG00000010020	zgc:110045	97	71.893	ENSCGRG00000001837	Pcbp3	90	71.893	Cricetulus_griseus_crigri
ENSCSEG00000010020	zgc:110045	98	89.474	ENSCVAG00000004726	zgc:110045	93	89.474	Cyprinodon_variegatus
ENSCSEG00000010020	zgc:110045	91	79.535	ENSDARG00000057141	zgc:110045	97	78.802	Danio_rerio
ENSCSEG00000010020	zgc:110045	99	71.137	ENSDNOG00000049518	PCBP3	92	71.137	Dasypus_novemcinctus
ENSCSEG00000010020	zgc:110045	97	65.182	ENSDORG00000003640	Pcbp3	99	65.182	Dipodomys_ordii
ENSCSEG00000010020	zgc:110045	95	70.982	ENSEBUG00000009697	zgc:110045	99	70.388	Eptatretus_burgeri
ENSCSEG00000010020	zgc:110045	99	75.232	ENSEASG00005007068	PCBP3	91	75.232	Equus_asinus_asinus
ENSCSEG00000010020	zgc:110045	99	75.232	ENSECAG00000012413	PCBP3	91	75.232	Equus_caballus
ENSCSEG00000010020	zgc:110045	99	86.154	ENSELUG00000019784	zgc:110045	100	82.110	Esox_lucius
ENSCSEG00000010020	zgc:110045	99	75.232	ENSFCAG00000014812	PCBP3	91	75.232	Felis_catus
ENSCSEG00000010020	zgc:110045	99	75.851	ENSFDAG00000009117	PCBP3	91	75.851	Fukomys_damarensis
ENSCSEG00000010020	zgc:110045	98	92.040	ENSFHEG00000018838	-	92	92.040	Fundulus_heteroclitus
ENSCSEG00000010020	zgc:110045	96	89.905	ENSGMOG00000005953	zgc:110045	96	89.905	Gadus_morhua
ENSCSEG00000010020	zgc:110045	98	94.954	ENSGAFG00000017864	zgc:110045	95	96.279	Gambusia_affinis
ENSCSEG00000010020	zgc:110045	59	81.122	ENSGAFG00000017860	-	100	81.122	Gambusia_affinis
ENSCSEG00000010020	zgc:110045	99	93.210	ENSGACG00000003044	zgc:110045	100	93.210	Gasterosteus_aculeatus
ENSCSEG00000010020	zgc:110045	99	75.542	ENSGGOG00000003683	PCBP3	91	75.542	Gorilla_gorilla
ENSCSEG00000010020	zgc:110045	100	95.706	ENSHBUG00000012495	zgc:110045	100	95.706	Haplochromis_burtoni
ENSCSEG00000010020	zgc:110045	99	71.137	ENSHGLG00000018620	PCBP3	91	71.137	Heterocephalus_glaber_female
ENSCSEG00000010020	zgc:110045	99	71.137	ENSHGLG00100013590	PCBP3	91	71.137	Heterocephalus_glaber_male
ENSCSEG00000010020	zgc:110045	91	90.278	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSCSEG00000010020	zgc:110045	90	77.209	ENSIPUG00000003932	zgc:110045	98	66.038	Ictalurus_punctatus
ENSCSEG00000010020	zgc:110045	97	71.893	ENSSTOG00000007178	PCBP3	90	71.893	Ictidomys_tridecemlineatus
ENSCSEG00000010020	zgc:110045	97	72.189	ENSJJAG00000021192	Pcbp3	90	72.189	Jaculus_jaculus
ENSCSEG00000010020	zgc:110045	96	94.359	ENSKMAG00000016179	-	99	91.176	Kryptolebias_marmoratus
ENSCSEG00000010020	zgc:110045	100	86.589	ENSLBEG00000023074	zgc:110045	100	86.589	Labrus_bergylta
ENSCSEG00000010020	zgc:110045	95	73.361	ENSLAFG00000020835	PCBP3	100	73.361	Loxodonta_africana
ENSCSEG00000010020	zgc:110045	99	75.542	ENSMFAG00000034574	PCBP3	91	75.542	Macaca_fascicularis
ENSCSEG00000010020	zgc:110045	99	75.542	ENSMMUG00000003825	PCBP3	99	70.679	Macaca_mulatta
ENSCSEG00000010020	zgc:110045	99	75.542	ENSMNEG00000035551	PCBP3	99	75.542	Macaca_nemestrina
ENSCSEG00000010020	zgc:110045	99	75.542	ENSMLEG00000038785	PCBP3	99	68.072	Mandrillus_leucophaeus
ENSCSEG00000010020	zgc:110045	97	94.921	ENSMAMG00000014389	zgc:110045	100	94.921	Mastacembelus_armatus
ENSCSEG00000010020	zgc:110045	100	93.318	ENSMZEG00005011785	zgc:110045	100	93.318	Maylandia_zebra
ENSCSEG00000010020	zgc:110045	97	71.893	ENSMAUG00000007036	Pcbp3	90	71.893	Mesocricetus_auratus
ENSCSEG00000010020	zgc:110045	99	75.232	ENSMICG00000012679	PCBP3	91	75.232	Microcebus_murinus
ENSCSEG00000010020	zgc:110045	97	71.893	ENSMOCG00000016127	Pcbp3	90	71.893	Microtus_ochrogaster
ENSCSEG00000010020	zgc:110045	87	86.957	ENSMMOG00000008399	zgc:110045	98	86.957	Mola_mola
ENSCSEG00000010020	zgc:110045	59	86.911	ENSMMOG00000008398	-	100	86.911	Mola_mola
ENSCSEG00000010020	zgc:110045	84	89.950	ENSMALG00000008763	zgc:110045	96	89.950	Monopterus_albus
ENSCSEG00000010020	zgc:110045	97	72.609	MGP_CAROLIEiJ_G0015475	Pcbp3	99	72.609	Mus_caroli
ENSCSEG00000010020	zgc:110045	97	72.609	ENSMUSG00000001120	Pcbp3	99	72.609	Mus_musculus
ENSCSEG00000010020	zgc:110045	97	72.609	MGP_PahariEiJ_G0030889	Pcbp3	99	72.609	Mus_pahari
ENSCSEG00000010020	zgc:110045	97	72.609	MGP_SPRETEiJ_G0016288	Pcbp3	99	72.609	Mus_spretus
ENSCSEG00000010020	zgc:110045	99	71.137	ENSMLUG00000003074	PCBP3	91	71.137	Myotis_lucifugus
ENSCSEG00000010020	zgc:110045	97	71.893	ENSNGAG00000005416	Pcbp3	90	71.893	Nannospalax_galili
ENSCSEG00000010020	zgc:110045	100	93.779	ENSNBRG00000017646	zgc:110045	100	93.779	Neolamprologus_brichardi
ENSCSEG00000010020	zgc:110045	99	75.542	ENSNLEG00000002639	PCBP3	91	75.542	Nomascus_leucogenys
ENSCSEG00000010020	zgc:110045	97	66.479	ENSMEUG00000012960	PCBP3	98	66.479	Notamacropus_eugenii
ENSCSEG00000010020	zgc:110045	99	68.805	ENSODEG00000012873	PCBP3	91	68.805	Octodon_degus
ENSCSEG00000010020	zgc:110045	99	94.118	ENSONIG00000010370	zgc:110045	100	88.018	Oreochromis_niloticus
ENSCSEG00000010020	zgc:110045	90	72.112	ENSOANG00000006265	PCBP3	88	72.112	Ornithorhynchus_anatinus
ENSCSEG00000010020	zgc:110045	97	94.620	ENSORLG00000014385	-	100	91.244	Oryzias_latipes
ENSCSEG00000010020	zgc:110045	97	93.987	ENSORLG00020003139	zgc:110045	100	88.940	Oryzias_latipes_hni
ENSCSEG00000010020	zgc:110045	100	91.705	ENSOMEG00000015459	-	100	91.705	Oryzias_melastigma
ENSCSEG00000010020	zgc:110045	99	68.915	ENSOARG00000012704	PCBP3	91	68.915	Ovis_aries
ENSCSEG00000010020	zgc:110045	99	75.542	ENSPPAG00000021940	PCBP3	91	75.542	Pan_paniscus
ENSCSEG00000010020	zgc:110045	99	75.232	ENSPPRG00000003933	PCBP3	91	75.232	Panthera_pardus
ENSCSEG00000010020	zgc:110045	99	61.656	ENSPTIG00000012038	PCBP3	83	73.016	Panthera_tigris_altaica
ENSCSEG00000010020	zgc:110045	99	55.728	ENSPTRG00000014010	PCBP3	99	50.552	Pan_troglodytes
ENSCSEG00000010020	zgc:110045	99	75.542	ENSPANG00000023631	PCBP3	91	75.542	Papio_anubis
ENSCSEG00000010020	zgc:110045	90	57.674	ENSPMGG00000022531	-	96	57.143	Periophthalmus_magnuspinnatus
ENSCSEG00000010020	zgc:110045	97	79.128	ENSPMGG00000021588	-	99	74.376	Periophthalmus_magnuspinnatus
ENSCSEG00000010020	zgc:110045	97	71.893	ENSPEMG00000000587	Pcbp3	90	71.893	Peromyscus_maniculatus_bairdii
ENSCSEG00000010020	zgc:110045	63	71.429	ENSPMAG00000004719	zgc:110045	93	71.429	Petromyzon_marinus
ENSCSEG00000010020	zgc:110045	98	94.025	ENSPFOG00000002348	zgc:110045	100	92.169	Poecilia_formosa
ENSCSEG00000010020	zgc:110045	91	92.093	ENSPLAG00000017488	zgc:110045	95	92.093	Poecilia_latipinna
ENSCSEG00000010020	zgc:110045	98	94.954	ENSPMEG00000012762	zgc:110045	95	96.279	Poecilia_mexicana
ENSCSEG00000010020	zgc:110045	99	92.308	ENSPREG00000001797	zgc:110045	95	95.814	Poecilia_reticulata
ENSCSEG00000010020	zgc:110045	87	75.635	ENSPPYG00000011525	-	94	68.966	Pongo_abelii
ENSCSEG00000010020	zgc:110045	93	58.529	ENSPCAG00000001454	PCBP3	98	58.529	Procavia_capensis
ENSCSEG00000010020	zgc:110045	99	75.232	ENSPCOG00000013797	PCBP3	91	75.232	Propithecus_coquereli
ENSCSEG00000010020	zgc:110045	89	70.306	ENSPVAG00000000832	PCBP3	73	79.412	Pteropus_vampyrus
ENSCSEG00000010020	zgc:110045	60	89.286	ENSPNYG00000004656	-	98	89.286	Pundamilia_nyererei
ENSCSEG00000010020	zgc:110045	98	92.166	ENSPNYG00000004637	zgc:110045	99	92.166	Pundamilia_nyererei
ENSCSEG00000010020	zgc:110045	91	80.000	ENSPNAG00000004501	zgc:110045	97	79.263	Pygocentrus_nattereri
ENSCSEG00000010020	zgc:110045	99	75.542	ENSRROG00000034567	PCBP3	91	75.542	Rhinopithecus_roxellana
ENSCSEG00000010020	zgc:110045	99	75.542	ENSSBOG00000005789	PCBP3	91	75.542	Saimiri_boliviensis_boliviensis
ENSCSEG00000010020	zgc:110045	100	95.781	ENSSMAG00000013541	zgc:110045	100	95.781	Scophthalmus_maximus
ENSCSEG00000010020	zgc:110045	96	94.203	ENSSDUG00000019371	zgc:110045	100	94.203	Seriola_dumerili
ENSCSEG00000010020	zgc:110045	100	94.240	ENSSLDG00000021064	zgc:110045	100	94.240	Seriola_lalandi_dorsalis
ENSCSEG00000010020	zgc:110045	58	79.562	ENSSARG00000007629	-	100	62.136	Sorex_araneus
ENSCSEG00000010020	zgc:110045	100	96.319	ENSSPAG00000000563	zgc:110045	100	96.319	Stegastes_partitus
ENSCSEG00000010020	zgc:110045	99	75.232	ENSSSCG00000023041	PCBP3	91	75.232	Sus_scrofa
ENSCSEG00000010020	zgc:110045	84	92.965	ENSTRUG00000017789	zgc:110045	98	92.965	Takifugu_rubripes
ENSCSEG00000010020	zgc:110045	80	87.368	ENSTNIG00000003546	zgc:110045	96	85.567	Tetraodon_nigroviridis
ENSCSEG00000010020	zgc:110045	90	55.869	ENSTBEG00000011882	-	71	58.621	Tupaia_belangeri
ENSCSEG00000010020	zgc:110045	95	74.825	ENSUAMG00000006491	PCBP3	100	74.825	Ursus_americanus
ENSCSEG00000010020	zgc:110045	97	64.223	ENSUMAG00000025403	PCBP3	89	64.223	Ursus_maritimus
ENSCSEG00000010020	zgc:110045	99	66.866	ENSVVUG00000023862	PCBP3	98	64.223	Vulpes_vulpes
ENSCSEG00000010020	zgc:110045	99	84.127	ENSXCOG00000005968	zgc:110045	88	92.398	Xiphophorus_couchianus
ENSCSEG00000010020	zgc:110045	99	92.308	ENSXMAG00000008030	zgc:110045	100	90.092	Xiphophorus_maculatus