EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000010047 (Gene tree)
Gene ID: 103393464
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 7461 bases
Position: chr17:13315554-13323014
Accession: 103393464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015625	Btz	PF09405.10	1.8e-20	1	1
ENSCSEP00000015630	Btz	PF09405.10	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000015818	-	2607	XM_017040418	ENSCSEP00000015625	790 (aa)	XP_016895907	UPI0007DCB4A6
ENSCSET00000015822	-	2682	-	ENSCSEP00000015630	815 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000010047's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010047	casc3	59	59.563	ENSG00000108349	CASC3	88	48.424	Homo_sapiens
ENSCSEG00000010047	casc3	100	65.157	ENSAPOG00000008467	casc3	100	68.546	Acanthochromis_polyacanthus
ENSCSEG00000010047	casc3	56	64.375	ENSAMEG00000007764	CASC3	82	51.911	Ailuropoda_melanoleuca
ENSCSEG00000010047	casc3	69	84.615	ENSACIG00000000720	casc3	93	84.615	Amphilophus_citrinellus
ENSCSEG00000010047	casc3	100	68.090	ENSAOCG00000016676	casc3	100	69.095	Amphiprion_ocellaris
ENSCSEG00000010047	casc3	100	67.839	ENSAPEG00000006787	casc3	100	68.844	Amphiprion_percula
ENSCSEG00000010047	casc3	100	68.593	ENSATEG00000017196	casc3	100	69.962	Anabas_testudineus
ENSCSEG00000010047	casc3	54	70.504	ENSACAG00000002674	CASC3	73	50.476	Anolis_carolinensis
ENSCSEG00000010047	casc3	57	52.121	ENSANAG00000034820	-	77	49.677	Aotus_nancymaae
ENSCSEG00000010047	casc3	100	69.659	ENSACLG00000016198	casc3	100	69.987	Astatotilapia_calliptera
ENSCSEG00000010047	casc3	75	51.133	ENSBTAG00000006250	CASC3	82	51.780	Bos_taurus
ENSCSEG00000010047	casc3	57	64.375	ENSCJAG00000016032	CASC3	65	68.531	Callithrix_jacchus
ENSCSEG00000010047	casc3	56	64.375	ENSCAFG00000016141	CASC3	82	51.592	Canis_familiaris
ENSCSEG00000010047	casc3	56	64.375	ENSCAFG00020018882	CASC3	90	51.592	Canis_lupus_dingo
ENSCSEG00000010047	casc3	76	50.968	ENSCHIG00000006338	CASC3	83	51.250	Capra_hircus
ENSCSEG00000010047	casc3	54	69.655	ENSTSYG00000002975	CASC3	76	50.588	Carlito_syrichta
ENSCSEG00000010047	casc3	57	62.573	ENSCAPG00000010514	CASC3	75	66.234	Cavia_aperea
ENSCSEG00000010047	casc3	52	71.852	ENSCPOG00000015139	CASC3	78	50.467	Cavia_porcellus
ENSCSEG00000010047	casc3	60	60.109	ENSCCAG00000033620	CASC3	67	64.375	Cebus_capucinus
ENSCSEG00000010047	casc3	59	60.109	ENSCATG00000033593	CASC3	86	49.849	Cercocebus_atys
ENSCSEG00000010047	casc3	57	63.158	ENSCLAG00000013730	CASC3	83	51.911	Chinchilla_lanigera
ENSCSEG00000010047	casc3	59	60.109	ENSCSAG00000002777	CASC3	86	49.849	Chlorocebus_sabaeus
ENSCSEG00000010047	casc3	77	48.773	ENSCPBG00000004750	CASC3	68	74.590	Chrysemys_picta_bellii
ENSCSEG00000010047	casc3	59	60.109	ENSCANG00000008814	CASC3	86	49.547	Colobus_angolensis_palliatus
ENSCSEG00000010047	casc3	76	50.473	ENSCGRG00001014706	Casc3	84	49.267	Cricetulus_griseus_chok1gshd
ENSCSEG00000010047	casc3	76	50.473	ENSCGRG00000001952	Casc3	84	49.560	Cricetulus_griseus_crigri
ENSCSEG00000010047	casc3	79	66.083	ENSCVAG00000014935	casc3	100	63.258	Cyprinodon_variegatus
ENSCSEG00000010047	casc3	81	43.666	ENSDNOG00000017249	CASC3	82	47.578	Dasypus_novemcinctus
ENSCSEG00000010047	casc3	74	47.692	ENSETEG00000013720	CASC3	81	48.966	Echinops_telfairi
ENSCSEG00000010047	casc3	52	40.654	ENSEBUG00000010654	casc3	54	48.872	Eptatretus_burgeri
ENSCSEG00000010047	casc3	56	64.375	ENSEASG00005002909	CASC3	90	50.313	Equus_asinus_asinus
ENSCSEG00000010047	casc3	100	53.357	ENSELUG00000015093	casc3	92	52.387	Esox_lucius
ENSCSEG00000010047	casc3	74	50.831	ENSFCAG00000014998	CASC3	82	51.911	Felis_catus
ENSCSEG00000010047	casc3	66	50.000	ENSFALG00000000412	CASC3	51	48.980	Ficedula_albicollis
ENSCSEG00000010047	casc3	56	68.667	ENSFDAG00000020696	CASC3	79	50.476	Fukomys_damarensis
ENSCSEG00000010047	casc3	79	67.619	ENSFHEG00000015793	casc3	100	65.448	Fundulus_heteroclitus
ENSCSEG00000010047	casc3	69	50.988	ENSGALG00000031813	CASC3	78	52.063	Gallus_gallus
ENSCSEG00000010047	casc3	98	65.482	ENSGAFG00000017148	casc3	86	66.035	Gambusia_affinis
ENSCSEG00000010047	casc3	56	69.231	ENSGAGG00000008432	CASC3	74	74.590	Gopherus_agassizii
ENSCSEG00000010047	casc3	59	59.563	ENSGGOG00000005067	CASC3	85	50.314	Gorilla_gorilla
ENSCSEG00000010047	casc3	100	69.785	ENSHBUG00000013155	casc3	100	70.113	Haplochromis_burtoni
ENSCSEG00000010047	casc3	74	49.835	ENSHGLG00000012117	CASC3	82	50.318	Heterocephalus_glaber_female
ENSCSEG00000010047	casc3	66	50.820	ENSHGLG00100002268	CASC3	81	50.410	Heterocephalus_glaber_male
ENSCSEG00000010047	casc3	100	58.105	ENSHCOG00000002664	casc3	100	57.179	Hippocampus_comes
ENSCSEG00000010047	casc3	59	64.375	ENSSTOG00000006374	CASC3	84	48.036	Ictidomys_tridecemlineatus
ENSCSEG00000010047	casc3	54	71.970	ENSJJAG00000023525	Casc3	82	50.621	Jaculus_jaculus
ENSCSEG00000010047	casc3	65	93.750	ENSKMAG00000019507	casc3	83	93.750	Kryptolebias_marmoratus
ENSCSEG00000010047	casc3	96	65.854	ENSLBEG00000005435	casc3	100	68.881	Labrus_bergylta
ENSCSEG00000010047	casc3	76	49.383	ENSLACG00000013200	CASC3	82	52.090	Latimeria_chalumnae
ENSCSEG00000010047	casc3	71	59.167	ENSLOCG00000013518	casc3	70	59.167	Lepisosteus_oculatus
ENSCSEG00000010047	casc3	74	49.505	ENSLAFG00000000606	CASC3	82	49.840	Loxodonta_africana
ENSCSEG00000010047	casc3	59	60.109	ENSMFAG00000041496	CASC3	95	49.849	Macaca_fascicularis
ENSCSEG00000010047	casc3	59	60.109	ENSMMUG00000045187	CASC3	86	49.849	Macaca_mulatta
ENSCSEG00000010047	casc3	59	60.109	ENSMLEG00000029049	CASC3	85	49.849	Mandrillus_leucophaeus
ENSCSEG00000010047	casc3	96	66.667	ENSMAMG00000005235	casc3	100	67.125	Mastacembelus_armatus
ENSCSEG00000010047	casc3	100	69.659	ENSMZEG00005003815	casc3	100	69.987	Maylandia_zebra
ENSCSEG00000010047	casc3	55	69.930	ENSMGAG00000013247	CASC3	74	67.606	Meleagris_gallopavo
ENSCSEG00000010047	casc3	57	60.819	ENSMICG00000003321	CASC3	86	49.547	Microcebus_murinus
ENSCSEG00000010047	casc3	76	51.429	ENSMOCG00000013644	Casc3	84	49.555	Microtus_ochrogaster
ENSCSEG00000010047	casc3	100	64.743	ENSMMOG00000014339	casc3	100	63.705	Mola_mola
ENSCSEG00000010047	casc3	52	71.212	ENSMODG00000013044	CASC3	71	53.165	Monodelphis_domestica
ENSCSEG00000010047	casc3	59	91.000	ENSMALG00000019771	casc3	92	75.556	Monopterus_albus
ENSCSEG00000010047	casc3	79	50.755	MGP_CAROLIEiJ_G0017099	Casc3	82	52.532	Mus_caroli
ENSCSEG00000010047	casc3	79	51.057	ENSMUSG00000078676	Casc3	82	52.848	Mus_musculus
ENSCSEG00000010047	casc3	77	52.050	MGP_SPRETEiJ_G0017943	Casc3	82	52.848	Mus_spretus
ENSCSEG00000010047	casc3	57	64.375	ENSMPUG00000014903	CASC3	78	50.637	Mustela_putorius_furo
ENSCSEG00000010047	casc3	56	62.264	ENSMLUG00000010520	CASC3	83	48.802	Myotis_lucifugus
ENSCSEG00000010047	casc3	55	67.333	ENSNGAG00000023121	Casc3	86	48.943	Nannospalax_galili
ENSCSEG00000010047	casc3	59	60.109	ENSNLEG00000001598	CASC3	85	50.303	Nomascus_leucogenys
ENSCSEG00000010047	casc3	59	44.687	ENSOPRG00000007240	-	53	47.569	Ochotona_princeps
ENSCSEG00000010047	casc3	76	49.835	ENSODEG00000017858	CASC3	78	50.955	Octodon_degus
ENSCSEG00000010047	casc3	100	69.735	ENSONIG00000009337	casc3	100	69.762	Oreochromis_niloticus
ENSCSEG00000010047	casc3	57	64.375	ENSOCUG00000002954	CASC3	82	49.398	Oryctolagus_cuniculus
ENSCSEG00000010047	casc3	78	63.974	ENSORLG00000023125	casc3	100	61.209	Oryzias_latipes
ENSCSEG00000010047	casc3	58	61.236	ENSOGAG00000034486	CASC3	86	47.688	Otolemur_garnettii
ENSCSEG00000010047	casc3	76	51.485	ENSOARG00000013239	CASC3	83	51.757	Ovis_aries
ENSCSEG00000010047	casc3	59	59.563	ENSPPAG00000035069	CASC3	88	48.424	Pan_paniscus
ENSCSEG00000010047	casc3	74	50.498	ENSPPRG00000023670	CASC3	82	51.592	Panthera_pardus
ENSCSEG00000010047	casc3	56	63.750	ENSPTIG00000010891	CASC3	74	51.383	Panthera_tigris_altaica
ENSCSEG00000010047	casc3	59	60.109	ENSPANG00000021708	CASC3	86	49.706	Papio_anubis
ENSCSEG00000010047	casc3	55	69.930	ENSPEMG00000009774	Casc3	81	51.258	Peromyscus_maniculatus_bairdii
ENSCSEG00000010047	casc3	51	73.770	ENSPCIG00000025678	CASC3	78	53.226	Phascolarctos_cinereus
ENSCSEG00000010047	casc3	79	65.409	ENSPFOG00000017632	casc3	96	67.077	Poecilia_formosa
ENSCSEG00000010047	casc3	80	69.735	ENSPLAG00000005268	casc3	100	67.123	Poecilia_latipinna
ENSCSEG00000010047	casc3	50	82.143	ENSPMEG00000010299	casc3	79	82.143	Poecilia_mexicana
ENSCSEG00000010047	casc3	77	68.669	ENSPREG00000011856	casc3	91	78.125	Poecilia_reticulata
ENSCSEG00000010047	casc3	58	59.563	ENSPPYG00000008467	CASC3	85	51.735	Pongo_abelii
ENSCSEG00000010047	casc3	57	60.819	ENSPCOG00000008183	CASC3	86	48.817	Propithecus_coquereli
ENSCSEG00000010047	casc3	76	50.825	ENSPVAG00000008556	CASC3	84	50.949	Pteropus_vampyrus
ENSCSEG00000010047	casc3	100	69.785	ENSPNYG00000011962	casc3	100	70.113	Pundamilia_nyererei
ENSCSEG00000010047	casc3	79	49.547	ENSRNOG00000009716	Casc3	91	51.266	Rattus_norvegicus
ENSCSEG00000010047	casc3	59	60.109	ENSRBIG00000033289	CASC3	86	49.849	Rhinopithecus_bieti
ENSCSEG00000010047	casc3	59	60.109	ENSRROG00000022337	CASC3	86	49.849	Rhinopithecus_roxellana
ENSCSEG00000010047	casc3	57	62.573	ENSSBOG00000031406	CASC3	74	66.234	Saimiri_boliviensis_boliviensis
ENSCSEG00000010047	casc3	55	67.105	ENSSHAG00000013338	CASC3	80	53.896	Sarcophilus_harrisii
ENSCSEG00000010047	casc3	100	66.996	ENSSMAG00000016096	casc3	100	68.227	Scophthalmus_maximus
ENSCSEG00000010047	casc3	100	66.874	ENSSDUG00000016893	casc3	95	69.403	Seriola_dumerili
ENSCSEG00000010047	casc3	81	69.972	ENSSLDG00000020308	casc3	98	73.164	Seriola_lalandi_dorsalis
ENSCSEG00000010047	casc3	100	65.207	ENSSPAG00000023008	casc3	100	66.916	Stegastes_partitus
ENSCSEG00000010047	casc3	66	52.869	ENSSSCG00000017477	CASC3	71	62.179	Sus_scrofa
ENSCSEG00000010047	casc3	50	68.085	ENSTGUG00000002300	CASC3	79	65.957	Taeniopygia_guttata
ENSCSEG00000010047	casc3	96	64.567	ENSTRUG00000000673	casc3	100	64.573	Takifugu_rubripes
ENSCSEG00000010047	casc3	91	68.229	ENSTNIG00000003208	casc3	95	69.272	Tetraodon_nigroviridis
ENSCSEG00000010047	casc3	74	51.155	ENSUAMG00000015116	CASC3	90	51.592	Ursus_americanus
ENSCSEG00000010047	casc3	56	62.500	ENSUMAG00000017697	CASC3	85	66.434	Ursus_maritimus
ENSCSEG00000010047	casc3	56	64.375	ENSVVUG00000000997	CASC3	82	51.274	Vulpes_vulpes
ENSCSEG00000010047	casc3	70	46.602	ENSXETG00000024395	casc3	79	52.113	Xenopus_tropicalis
ENSCSEG00000010047	casc3	100	67.710	ENSXMAG00000013937	casc3	100	67.750	Xiphophorus_maculatus