EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000010248 (Gene tree)
Gene ID: 103388721
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3040 bases
Position: chr13:15484088-15487127
Accession: 103388721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015948	RRM_1	PF00076.22	7.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016148	-	1222	XM_008323848	ENSCSEP00000015948	397 (aa)	XP_008322070	UPI0004966806

Gene Model

Click here to download ENSCSEG00000010248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010248	rbm42	100	83.627	ENSAPOG00000015109	rbm42	97	82.620	Acanthochromis_polyacanthus
ENSCSEG00000010248	rbm42	100	77.078	ENSACIG00000010771	rbm42	97	76.826	Amphilophus_citrinellus
ENSCSEG00000010248	rbm42	100	83.879	ENSAOCG00000008873	rbm42	97	82.872	Amphiprion_ocellaris
ENSCSEG00000010248	rbm42	100	83.879	ENSAPEG00000012051	rbm42	96	82.872	Amphiprion_percula
ENSCSEG00000010248	rbm42	100	81.864	ENSATEG00000000536	rbm42	97	81.612	Anabas_testudineus
ENSCSEG00000010248	rbm42	100	81.407	ENSACLG00000004988	rbm42	97	81.156	Astatotilapia_calliptera
ENSCSEG00000010248	rbm42	100	70.803	ENSAMXG00000016545	rbm42	97	69.343	Astyanax_mexicanus
ENSCSEG00000010248	rbm42	100	77.307	ENSCVAG00000015589	rbm42	97	77.307	Cyprinodon_variegatus
ENSCSEG00000010248	rbm42	100	66.262	ENSDARG00000039910	rbm42	97	64.235	Danio_rerio
ENSCSEG00000010248	rbm42	68	42.960	FBgn0037342	CG2931	71	39.245	Drosophila_melanogaster
ENSCSEG00000010248	rbm42	100	69.807	ENSELUG00000022403	rbm42	97	65.046	Esox_lucius
ENSCSEG00000010248	rbm42	68	76.812	ENSFHEG00000006764	rbm42	91	77.091	Fundulus_heteroclitus
ENSCSEG00000010248	rbm42	100	68.329	ENSGMOG00000012660	rbm42	97	68.734	Gadus_morhua
ENSCSEG00000010248	rbm42	78	74.921	ENSGAFG00000009059	rbm42	99	76.923	Gambusia_affinis
ENSCSEG00000010248	rbm42	100	79.849	ENSGACG00000004170	rbm42	97	79.345	Gasterosteus_aculeatus
ENSCSEG00000010248	rbm42	100	80.856	ENSHBUG00000011141	rbm42	97	80.605	Haplochromis_burtoni
ENSCSEG00000010248	rbm42	100	76.441	ENSHCOG00000021214	rbm42	97	77.945	Hippocampus_comes
ENSCSEG00000010248	rbm42	100	65.972	ENSIPUG00000022365	rbm42	97	64.965	Ictalurus_punctatus
ENSCSEG00000010248	rbm42	91	76.584	ENSKMAG00000015287	rbm42	96	76.584	Kryptolebias_marmoratus
ENSCSEG00000010248	rbm42	87	80.802	ENSLBEG00000004578	-	96	80.114	Labrus_bergylta
ENSCSEG00000010248	rbm42	100	80.000	ENSLBEG00000017547	rbm42	97	80.000	Labrus_bergylta
ENSCSEG00000010248	rbm42	100	63.420	ENSLOCG00000003368	rbm42	97	63.658	Lepisosteus_oculatus
ENSCSEG00000010248	rbm42	100	82.872	ENSMAMG00000006708	rbm42	97	82.620	Mastacembelus_armatus
ENSCSEG00000010248	rbm42	100	81.407	ENSMZEG00005025234	rbm42	97	81.156	Maylandia_zebra
ENSCSEG00000010248	rbm42	94	83.871	ENSMALG00000015720	rbm42	100	82.796	Monopterus_albus
ENSCSEG00000010248	rbm42	100	81.250	ENSONIG00000008029	rbm42	97	81.000	Oreochromis_niloticus
ENSCSEG00000010248	rbm42	100	60.000	ENSORLG00020022507	rbm42	97	57.176	Oryzias_latipes_hni
ENSCSEG00000010248	rbm42	100	79.345	ENSORLG00015000659	rbm42	97	79.345	Oryzias_latipes_hsok
ENSCSEG00000010248	rbm42	72	72.727	ENSOMEG00000014332	rbm42	97	76.894	Oryzias_melastigma
ENSCSEG00000010248	rbm42	100	71.007	ENSPKIG00000015165	rbm42	97	69.704	Paramormyrops_kingsleyae
ENSCSEG00000010248	rbm42	73	82.540	ENSPMGG00000003569	rbm42	91	95.714	Periophthalmus_magnuspinnatus
ENSCSEG00000010248	rbm42	100	76.309	ENSPFOG00000007701	rbm42	97	77.805	Poecilia_formosa
ENSCSEG00000010248	rbm42	100	76.309	ENSPLAG00000009405	rbm42	97	77.861	Poecilia_latipinna
ENSCSEG00000010248	rbm42	100	76.309	ENSPMEG00000010375	rbm42	97	77.805	Poecilia_mexicana
ENSCSEG00000010248	rbm42	100	76.060	ENSPREG00000018102	rbm42	97	77.556	Poecilia_reticulata
ENSCSEG00000010248	rbm42	100	81.156	ENSPNYG00000014460	rbm42	97	80.905	Pundamilia_nyererei
ENSCSEG00000010248	rbm42	100	70.531	ENSPNAG00000009961	rbm42	97	69.324	Pygocentrus_nattereri
ENSCSEG00000010248	rbm42	100	66.905	ENSSFOG00015019227	rbm42	97	67.797	Scleropages_formosus
ENSCSEG00000010248	rbm42	100	82.412	ENSSMAG00000011935	rbm42	97	82.161	Scophthalmus_maximus
ENSCSEG00000010248	rbm42	100	85.390	ENSSDUG00000004033	rbm42	97	84.383	Seriola_dumerili
ENSCSEG00000010248	rbm42	100	74.559	ENSSLDG00000009918	rbm42	92	97.183	Seriola_lalandi_dorsalis
ENSCSEG00000010248	rbm42	100	83.375	ENSSPAG00000019871	rbm42	97	82.368	Stegastes_partitus
ENSCSEG00000010248	rbm42	100	78.338	ENSTRUG00000024586	-	74	76.322	Takifugu_rubripes
ENSCSEG00000010248	rbm42	100	67.898	ENSTNIG00000011669	rbm42	98	66.590	Tetraodon_nigroviridis
ENSCSEG00000010248	rbm42	100	58.711	ENSXETG00000017599	rbm42	97	58.353	Xenopus_tropicalis
ENSCSEG00000010248	rbm42	100	76.309	ENSXMAG00000012827	rbm42	97	77.805	Xiphophorus_maculatus