EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000010267 (Gene tree)
Gene ID: 107989212
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 2647 bases
Position: chr11:11986197-11988843
Accession: 107989212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000015969	Ribosomal_L29e	PF01779.17	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016169	-	1485	XM_017036498	ENSCSEP00000015969	66 (aa)	XP_016891987	UPI0007DC940D

Gene Model

Click here to download ENSCSEG00000010267's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010267	rpl29	70	95.652	ENSG00000162244	RPL29	97	88.889	Homo_sapiens
ENSCSEG00000010267	rpl29	82	92.593	ENSAPOG00000002586	rpl29	78	94.000	Acanthochromis_polyacanthus
ENSCSEG00000010267	rpl29	82	92.593	ENSACIG00000018340	rpl29	78	94.000	Amphilophus_citrinellus
ENSCSEG00000010267	rpl29	82	96.296	ENSAOCG00000016652	rpl29	78	98.000	Amphiprion_ocellaris
ENSCSEG00000010267	rpl29	82	96.296	ENSAPEG00000005754	rpl29	78	98.000	Amphiprion_percula
ENSCSEG00000010267	rpl29	70	93.478	ENSACAG00000006888	RPL29	77	94.000	Anolis_carolinensis
ENSCSEG00000010267	rpl29	70	95.652	ENSANAG00000024147	-	77	78.261	Aotus_nancymaae
ENSCSEG00000010267	rpl29	92	95.082	ENSACLG00000017820	rpl29	78	96.000	Astatotilapia_calliptera
ENSCSEG00000010267	rpl29	94	83.871	ENSAMXG00000038794	rpl29	78	92.000	Astyanax_mexicanus
ENSCSEG00000010267	rpl29	94	54.839	WBGene00004443	rpl-29	81	64.000	Caenorhabditis_elegans
ENSCSEG00000010267	rpl29	70	95.652	ENSCJAG00000042339	-	77	78.261	Callithrix_jacchus
ENSCSEG00000010267	rpl29	70	95.652	ENSCCAG00000027980	-	58	94.286	Cebus_capucinus
ENSCSEG00000010267	rpl29	79	75.000	ENSCING00000018496	-	86	76.000	Ciona_intestinalis
ENSCSEG00000010267	rpl29	79	76.923	ENSCSAVG00000005231	-	85	78.000	Ciona_savignyi
ENSCSEG00000010267	rpl29	70	95.652	ENSCGRG00001016452	-	74	96.000	Cricetulus_griseus_chok1gshd
ENSCSEG00000010267	rpl29	76	96.000	ENSCVAG00000023098	rpl29	78	96.000	Cyprinodon_variegatus
ENSCSEG00000010267	rpl29	94	88.889	ENSDARG00000077717	rpl29	78	96.000	Danio_rerio
ENSCSEG00000010267	rpl29	76	66.000	FBgn0016726	RpL29	66	66.000	Drosophila_melanogaster
ENSCSEG00000010267	rpl29	65	86.047	ENSEASG00005005507	-	66	86.047	Equus_asinus_asinus
ENSCSEG00000010267	rpl29	92	83.607	ENSELUG00000015592	RL29	71	88.000	Esox_lucius
ENSCSEG00000010267	rpl29	79	71.154	ENSFCAG00000043006	-	62	70.000	Felis_catus
ENSCSEG00000010267	rpl29	65	69.767	ENSFCAG00000035470	-	58	68.182	Felis_catus
ENSCSEG00000010267	rpl29	70	91.304	ENSFALG00000008925	RPL29	74	92.000	Ficedula_albicollis
ENSCSEG00000010267	rpl29	94	95.161	ENSFHEG00000015425	rpl29	78	96.000	Fundulus_heteroclitus
ENSCSEG00000010267	rpl29	82	87.037	ENSGMOG00000003626	rpl29	66	88.000	Gadus_morhua
ENSCSEG00000010267	rpl29	70	93.478	ENSGALG00000026978	RPL29	70	94.000	Gallus_gallus
ENSCSEG00000010267	rpl29	94	91.935	ENSGAFG00000012868	rpl29	78	94.000	Gambusia_affinis
ENSCSEG00000010267	rpl29	92	90.164	ENSGACG00000007041	rpl29	65	94.000	Gasterosteus_aculeatus
ENSCSEG00000010267	rpl29	70	75.000	ENSGAGG00000024203	-	89	75.000	Gopherus_agassizii
ENSCSEG00000010267	rpl29	70	95.652	ENSGGOG00000024691	RPL29	62	89.189	Gorilla_gorilla
ENSCSEG00000010267	rpl29	92	95.082	ENSHBUG00000010519	rpl29	78	96.000	Haplochromis_burtoni
ENSCSEG00000010267	rpl29	76	96.000	ENSHCOG00000000478	rpl29	64	96.000	Hippocampus_comes
ENSCSEG00000010267	rpl29	97	81.250	ENSIPUG00000001196	rpl29	78	94.000	Ictalurus_punctatus
ENSCSEG00000010267	rpl29	82	94.444	ENSKMAG00000011291	rpl29	78	96.000	Kryptolebias_marmoratus
ENSCSEG00000010267	rpl29	82	98.148	ENSLBEG00000016213	rpl29	74	98.000	Labrus_bergylta
ENSCSEG00000010267	rpl29	97	85.938	ENSLACG00000018622	rpl29	78	90.000	Latimeria_chalumnae
ENSCSEG00000010267	rpl29	88	89.655	ENSLACG00000018031	-	74	90.000	Latimeria_chalumnae
ENSCSEG00000010267	rpl29	70	91.304	ENSLOCG00000013798	rpl29	77	92.000	Lepisosteus_oculatus
ENSCSEG00000010267	rpl29	82	96.296	ENSMAMG00000014274	rpl29	53	96.000	Mastacembelus_armatus
ENSCSEG00000010267	rpl29	92	95.082	ENSMZEG00005013519	rpl29	78	96.000	Maylandia_zebra
ENSCSEG00000010267	rpl29	70	93.478	ENSMGAG00000001213	RPL29	70	94.000	Meleagris_gallopavo
ENSCSEG00000010267	rpl29	74	81.633	ENSMICG00000049466	-	74	81.633	Microcebus_murinus
ENSCSEG00000010267	rpl29	92	93.443	ENSMMOG00000010430	rpl29	78	94.000	Mola_mola
ENSCSEG00000010267	rpl29	82	98.148	ENSMALG00000009023	rpl29	64	98.000	Monopterus_albus
ENSCSEG00000010267	rpl29	70	95.652	ENSMUSG00000048758	Rpl29	74	96.000	Mus_musculus
ENSCSEG00000010267	rpl29	92	95.082	ENSNBRG00000022109	rpl29	78	96.000	Neolamprologus_brichardi
ENSCSEG00000010267	rpl29	92	95.082	ENSONIG00000014377	rpl29	79	96.000	Oreochromis_niloticus
ENSCSEG00000010267	rpl29	92	98.361	ENSORLG00000023610	rpl29	64	98.361	Oryzias_latipes
ENSCSEG00000010267	rpl29	92	98.361	ENSORLG00020018665	rpl29	64	98.361	Oryzias_latipes_hni
ENSCSEG00000010267	rpl29	92	98.361	ENSORLG00015014455	rpl29	64	98.361	Oryzias_latipes_hsok
ENSCSEG00000010267	rpl29	92	96.721	ENSOMEG00000019919	rpl29	95	96.721	Oryzias_melastigma
ENSCSEG00000010267	rpl29	55	91.667	ENSPPAG00000037142	-	61	91.667	Pan_paniscus
ENSCSEG00000010267	rpl29	79	75.000	ENSPPRG00000011689	-	75	75.510	Panthera_pardus
ENSCSEG00000010267	rpl29	89	67.797	ENSPTIG00000011913	-	61	72.000	Panthera_tigris_altaica
ENSCSEG00000010267	rpl29	70	95.652	ENSPTRG00000043237	RPL29	63	89.189	Pan_troglodytes
ENSCSEG00000010267	rpl29	70	93.478	ENSPKIG00000025048	rpl29	76	94.000	Paramormyrops_kingsleyae
ENSCSEG00000010267	rpl29	70	95.652	ENSPSIG00000014699	RPL29	79	96.000	Pelodiscus_sinensis
ENSCSEG00000010267	rpl29	94	88.710	ENSPMGG00000005361	rpl29	74	92.000	Periophthalmus_magnuspinnatus
ENSCSEG00000010267	rpl29	92	93.443	ENSPFOG00000011385	rpl29	82	94.000	Poecilia_formosa
ENSCSEG00000010267	rpl29	76	92.000	ENSPLAG00000012042	rpl29	78	92.000	Poecilia_latipinna
ENSCSEG00000010267	rpl29	76	94.000	ENSPMEG00000018297	rpl29	78	94.000	Poecilia_mexicana
ENSCSEG00000010267	rpl29	76	94.000	ENSPREG00000007066	rpl29	78	94.000	Poecilia_reticulata
ENSCSEG00000010267	rpl29	92	95.082	ENSPNYG00000019481	rpl29	78	96.000	Pundamilia_nyererei
ENSCSEG00000010267	rpl29	94	87.097	ENSPNAG00000007550	rpl29	78	96.000	Pygocentrus_nattereri
ENSCSEG00000010267	rpl29	79	86.538	ENSRNOG00000025794	AABR07021239.1	67	86.000	Rattus_norvegicus
ENSCSEG00000010267	rpl29	70	76.087	YFR032C-A	RPL29	78	76.087	Saccharomyces_cerevisiae
ENSCSEG00000010267	rpl29	82	96.296	ENSSMAG00000013571	rpl29	78	98.000	Scophthalmus_maximus
ENSCSEG00000010267	rpl29	70	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSCSEG00000010267	rpl29	92	96.721	ENSSDUG00000016140	rpl29	95	96.721	Seriola_dumerili
ENSCSEG00000010267	rpl29	92	96.721	ENSSLDG00000003932	rpl29	95	96.721	Seriola_lalandi_dorsalis
ENSCSEG00000010267	rpl29	70	93.478	ENSSPUG00000003760	RPL29	79	94.000	Sphenodon_punctatus
ENSCSEG00000010267	rpl29	82	88.889	ENSSPAG00000020292	rpl29	78	92.000	Stegastes_partitus
ENSCSEG00000010267	rpl29	59	89.744	ENSSSCG00000037047	-	86	90.476	Sus_scrofa
ENSCSEG00000010267	rpl29	82	68.519	ENSSSCG00000031314	-	75	70.833	Sus_scrofa
ENSCSEG00000010267	rpl29	70	91.304	ENSTGUG00000006027	RPL29	79	92.000	Taeniopygia_guttata
ENSCSEG00000010267	rpl29	100	87.879	ENSTRUG00000022273	rpl29	77	90.000	Takifugu_rubripes
ENSCSEG00000010267	rpl29	80	92.453	ENSTNIG00000014816	rpl29	74	92.000	Tetraodon_nigroviridis
ENSCSEG00000010267	rpl29	94	74.194	ENSTBEG00000000807	-	60	84.000	Tupaia_belangeri
ENSCSEG00000010267	rpl29	73	91.667	ENSUAMG00000002601	-	84	91.667	Ursus_americanus
ENSCSEG00000010267	rpl29	70	91.304	ENSVVUG00000012400	-	88	92.000	Vulpes_vulpes
ENSCSEG00000010267	rpl29	70	95.652	ENSXETG00000010811	rpl29	67	96.000	Xenopus_tropicalis
ENSCSEG00000010267	rpl29	92	91.803	ENSXCOG00000013543	rpl29	78	94.000	Xiphophorus_couchianus
ENSCSEG00000010267	rpl29	94	91.935	ENSXMAG00000020948	rpl29	78	94.000	Xiphophorus_maculatus