EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000010401 (Gene tree)
Gene ID: 103394705
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 10923 bases
Position: chr18:14744137-14755059
Accession: 103394705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016207	SF3a60_bindingd	PF12108.8	1.4e-15	1	1
ENSCSEP00000016185	SF3a60_bindingd	PF12108.8	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016415	-	1299	-	ENSCSEP00000016207	432 (aa)	-	-
ENSCSET00000016390	-	4279	XM_008332125	ENSCSEP00000016185	501 (aa)	XP_008330347	UPI0004957859

Gene Model

Click here to download ENSCSEG00000010401's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010401	sf3a3	100	89.621	ENSG00000183431	SF3A3	100	89.621	Homo_sapiens
ENSCSEG00000010401	sf3a3	100	95.609	ENSAPOG00000015608	sf3a3	100	95.609	Acanthochromis_polyacanthus
ENSCSEG00000010401	sf3a3	100	89.621	ENSAMEG00000001262	SF3A3	100	89.621	Ailuropoda_melanoleuca
ENSCSEG00000010401	sf3a3	99	86.957	ENSACIG00000009061	sf3a3	99	88.955	Amphilophus_citrinellus
ENSCSEG00000010401	sf3a3	100	96.008	ENSAOCG00000013954	sf3a3	100	96.008	Amphiprion_ocellaris
ENSCSEG00000010401	sf3a3	100	96.008	ENSAPEG00000007297	sf3a3	100	96.008	Amphiprion_percula
ENSCSEG00000010401	sf3a3	100	96.208	ENSATEG00000008754	sf3a3	100	96.208	Anabas_testudineus
ENSCSEG00000010401	sf3a3	94	89.979	ENSAPLG00000014900	SF3A3	100	89.979	Anas_platyrhynchos
ENSCSEG00000010401	sf3a3	100	88.224	ENSACAG00000017058	SF3A3	100	88.224	Anolis_carolinensis
ENSCSEG00000010401	sf3a3	99	86.345	ENSANAG00000014878	SF3A3	100	86.345	Aotus_nancymaae
ENSCSEG00000010401	sf3a3	100	69.461	ENSANAG00000036903	-	100	69.461	Aotus_nancymaae
ENSCSEG00000010401	sf3a3	100	95.210	ENSACLG00000017977	sf3a3	100	95.210	Astatotilapia_calliptera
ENSCSEG00000010401	sf3a3	100	93.413	ENSAMXG00000016855	sf3a3	87	93.413	Astyanax_mexicanus
ENSCSEG00000010401	sf3a3	100	89.621	ENSBTAG00000007299	SF3A3	100	89.621	Bos_taurus
ENSCSEG00000010401	sf3a3	100	51.292	WBGene00011758	T13H5.4	100	51.292	Caenorhabditis_elegans
ENSCSEG00000010401	sf3a3	100	89.621	ENSCJAG00000002176	SF3A3	100	89.621	Callithrix_jacchus
ENSCSEG00000010401	sf3a3	100	89.621	ENSCAFG00000000683	-	100	89.621	Canis_familiaris
ENSCSEG00000010401	sf3a3	100	89.621	ENSCAFG00000003222	-	100	89.621	Canis_familiaris
ENSCSEG00000010401	sf3a3	100	89.621	ENSCAFG00020006186	SF3A3	100	89.621	Canis_lupus_dingo
ENSCSEG00000010401	sf3a3	100	89.621	ENSCHIG00000020638	SF3A3	100	89.621	Capra_hircus
ENSCSEG00000010401	sf3a3	100	83.433	ENSTSYG00000008417	SF3A3	100	83.433	Carlito_syrichta
ENSCSEG00000010401	sf3a3	85	59.268	ENSCAPG00000003466	SF3A3	100	56.751	Cavia_aperea
ENSCSEG00000010401	sf3a3	100	89.820	ENSCPOG00000008660	SF3A3	100	89.820	Cavia_porcellus
ENSCSEG00000010401	sf3a3	100	89.621	ENSCCAG00000033732	SF3A3	100	89.621	Cebus_capucinus
ENSCSEG00000010401	sf3a3	100	64.072	ENSCCAG00000034048	-	98	64.237	Cebus_capucinus
ENSCSEG00000010401	sf3a3	99	71.954	ENSCATG00000041660	-	100	74.627	Cercocebus_atys
ENSCSEG00000010401	sf3a3	100	89.621	ENSCATG00000043496	SF3A3	100	89.621	Cercocebus_atys
ENSCSEG00000010401	sf3a3	100	67.131	ENSCATG00000043537	-	100	67.530	Cercocebus_atys
ENSCSEG00000010401	sf3a3	100	90.020	ENSCLAG00000010838	SF3A3	100	90.020	Chinchilla_lanigera
ENSCSEG00000010401	sf3a3	95	89.076	ENSCSAG00000001120	SF3A3	100	89.076	Chlorocebus_sabaeus
ENSCSEG00000010401	sf3a3	74	95.122	ENSCHOG00000006849	SF3A3	79	85.714	Choloepus_hoffmanni
ENSCSEG00000010401	sf3a3	100	82.036	ENSCPBG00000018291	-	100	82.036	Chrysemys_picta_bellii
ENSCSEG00000010401	sf3a3	70	67.110	ENSCPBG00000007472	-	79	68.590	Chrysemys_picta_bellii
ENSCSEG00000010401	sf3a3	100	67.729	ENSCING00000002730	-	100	67.729	Ciona_intestinalis
ENSCSEG00000010401	sf3a3	100	66.866	ENSCSAVG00000005063	-	100	66.866	Ciona_savignyi
ENSCSEG00000010401	sf3a3	100	64.271	ENSCANG00000035535	-	100	64.271	Colobus_angolensis_palliatus
ENSCSEG00000010401	sf3a3	100	89.621	ENSCANG00000042083	SF3A3	100	89.621	Colobus_angolensis_palliatus
ENSCSEG00000010401	sf3a3	100	90.220	ENSCGRG00001011320	Sf3a3	100	90.220	Cricetulus_griseus_chok1gshd
ENSCSEG00000010401	sf3a3	100	90.220	ENSCGRG00000012156	Sf3a3	100	90.220	Cricetulus_griseus_crigri
ENSCSEG00000010401	sf3a3	94	92.964	ENSCVAG00000010239	sf3a3	95	92.964	Cyprinodon_variegatus
ENSCSEG00000010401	sf3a3	100	93.014	ENSDARG00000100114	sf3a3	100	93.556	Danio_rerio
ENSCSEG00000010401	sf3a3	99	81.917	ENSDNOG00000046628	SF3A3	99	89.278	Dasypus_novemcinctus
ENSCSEG00000010401	sf3a3	100	89.820	ENSDORG00000008798	Sf3a3	100	89.820	Dipodomys_ordii
ENSCSEG00000010401	sf3a3	100	64.427	FBgn0014366	noi	100	64.229	Drosophila_melanogaster
ENSCSEG00000010401	sf3a3	100	78.529	ENSEBUG00000015411	sf3a3	92	78.926	Eptatretus_burgeri
ENSCSEG00000010401	sf3a3	100	89.621	ENSEASG00005012906	SF3A3	100	89.621	Equus_asinus_asinus
ENSCSEG00000010401	sf3a3	100	89.621	ENSECAG00000017333	SF3A3	100	89.621	Equus_caballus
ENSCSEG00000010401	sf3a3	100	91.417	ENSELUG00000010024	sf3a3	100	91.417	Esox_lucius
ENSCSEG00000010401	sf3a3	100	89.621	ENSFCAG00000027772	SF3A3	100	89.621	Felis_catus
ENSCSEG00000010401	sf3a3	100	89.421	ENSFALG00000001003	SF3A3	100	89.421	Ficedula_albicollis
ENSCSEG00000010401	sf3a3	100	89.820	ENSFDAG00000020908	SF3A3	100	89.820	Fukomys_damarensis
ENSCSEG00000010401	sf3a3	100	94.611	ENSFHEG00000019107	sf3a3	100	94.611	Fundulus_heteroclitus
ENSCSEG00000010401	sf3a3	100	92.216	ENSGMOG00000015540	sf3a3	100	92.216	Gadus_morhua
ENSCSEG00000010401	sf3a3	100	89.222	ENSGALG00000001540	SF3A3	100	89.222	Gallus_gallus
ENSCSEG00000010401	sf3a3	100	94.611	ENSGAFG00000002320	sf3a3	100	94.611	Gambusia_affinis
ENSCSEG00000010401	sf3a3	100	96.008	ENSGACG00000007842	sf3a3	100	96.008	Gasterosteus_aculeatus
ENSCSEG00000010401	sf3a3	100	89.621	ENSGAGG00000014980	SF3A3	100	89.621	Gopherus_agassizii
ENSCSEG00000010401	sf3a3	100	89.621	ENSGGOG00000013928	SF3A3	100	89.621	Gorilla_gorilla
ENSCSEG00000010401	sf3a3	100	69.461	ENSGGOG00000022611	-	100	69.261	Gorilla_gorilla
ENSCSEG00000010401	sf3a3	100	95.210	ENSHBUG00000018158	sf3a3	100	95.210	Haplochromis_burtoni
ENSCSEG00000010401	sf3a3	100	89.820	ENSHGLG00000012502	SF3A3	100	89.820	Heterocephalus_glaber_female
ENSCSEG00000010401	sf3a3	100	89.820	ENSHGLG00100010546	SF3A3	100	89.820	Heterocephalus_glaber_male
ENSCSEG00000010401	sf3a3	100	93.812	ENSHCOG00000015109	sf3a3	100	93.812	Hippocampus_comes
ENSCSEG00000010401	sf3a3	100	92.615	ENSIPUG00000011603	sf3a3	100	92.615	Ictalurus_punctatus
ENSCSEG00000010401	sf3a3	100	90.020	ENSSTOG00000001691	SF3A3	100	90.020	Ictidomys_tridecemlineatus
ENSCSEG00000010401	sf3a3	100	90.020	ENSJJAG00000012404	Sf3a3	100	90.020	Jaculus_jaculus
ENSCSEG00000010401	sf3a3	100	95.010	ENSKMAG00000007632	sf3a3	100	95.010	Kryptolebias_marmoratus
ENSCSEG00000010401	sf3a3	100	87.052	ENSLBEG00000000816	sf3a3	100	87.052	Labrus_bergylta
ENSCSEG00000010401	sf3a3	100	93.413	ENSLOCG00000003273	sf3a3	100	93.413	Lepisosteus_oculatus
ENSCSEG00000010401	sf3a3	100	78.244	ENSLAFG00000008094	SF3A3	100	78.244	Loxodonta_africana
ENSCSEG00000010401	sf3a3	99	67.634	ENSMFAG00000036706	-	100	73.774	Macaca_fascicularis
ENSCSEG00000010401	sf3a3	100	89.621	ENSMFAG00000043047	SF3A3	100	89.621	Macaca_fascicularis
ENSCSEG00000010401	sf3a3	100	70.858	ENSMMUG00000038820	-	100	72.655	Macaca_mulatta
ENSCSEG00000010401	sf3a3	100	89.621	ENSMMUG00000023199	SF3A3	100	89.621	Macaca_mulatta
ENSCSEG00000010401	sf3a3	99	65.848	ENSMNEG00000028686	-	100	72.068	Macaca_nemestrina
ENSCSEG00000010401	sf3a3	100	89.621	ENSMNEG00000044291	SF3A3	100	89.621	Macaca_nemestrina
ENSCSEG00000010401	sf3a3	100	89.621	ENSMLEG00000030641	SF3A3	100	89.621	Mandrillus_leucophaeus
ENSCSEG00000010401	sf3a3	100	66.335	ENSMLEG00000028631	-	100	66.733	Mandrillus_leucophaeus
ENSCSEG00000010401	sf3a3	100	75.050	ENSMLEG00000036714	-	100	76.447	Mandrillus_leucophaeus
ENSCSEG00000010401	sf3a3	100	95.609	ENSMAMG00000001942	sf3a3	100	95.609	Mastacembelus_armatus
ENSCSEG00000010401	sf3a3	100	95.210	ENSMZEG00005016987	sf3a3	100	95.210	Maylandia_zebra
ENSCSEG00000010401	sf3a3	100	84.692	ENSMGAG00000002875	SF3A3	100	84.692	Meleagris_gallopavo
ENSCSEG00000010401	sf3a3	99	79.650	ENSMICG00000026541	-	100	87.118	Microcebus_murinus
ENSCSEG00000010401	sf3a3	100	85.828	ENSMICG00000001485	-	100	85.828	Microcebus_murinus
ENSCSEG00000010401	sf3a3	100	84.032	ENSMICG00000043548	-	100	84.032	Microcebus_murinus
ENSCSEG00000010401	sf3a3	95	84.421	ENSMOCG00000014565	-	97	83.368	Microtus_ochrogaster
ENSCSEG00000010401	sf3a3	100	87.226	ENSMOCG00000019939	-	100	87.226	Microtus_ochrogaster
ENSCSEG00000010401	sf3a3	100	95.210	ENSMMOG00000014307	sf3a3	100	95.210	Mola_mola
ENSCSEG00000010401	sf3a3	100	83.034	ENSMODG00000024045	-	100	83.034	Monodelphis_domestica
ENSCSEG00000010401	sf3a3	100	70.680	ENSMODG00000017729	-	100	69.691	Monodelphis_domestica
ENSCSEG00000010401	sf3a3	100	95.609	ENSMALG00000004836	sf3a3	100	95.609	Monopterus_albus
ENSCSEG00000010401	sf3a3	100	90.220	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.220	Mus_caroli
ENSCSEG00000010401	sf3a3	100	90.220	ENSMUSG00000028902	Sf3a3	100	90.220	Mus_musculus
ENSCSEG00000010401	sf3a3	100	84.830	MGP_PahariEiJ_G0028780	Sf3a3	100	84.830	Mus_pahari
ENSCSEG00000010401	sf3a3	100	90.220	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.220	Mus_spretus
ENSCSEG00000010401	sf3a3	100	89.621	ENSMLUG00000000991	SF3A3	100	89.621	Myotis_lucifugus
ENSCSEG00000010401	sf3a3	100	84.830	ENSNGAG00000018032	Sf3a3	100	84.830	Nannospalax_galili
ENSCSEG00000010401	sf3a3	100	82.435	ENSNLEG00000011720	SF3A3	100	82.435	Nomascus_leucogenys
ENSCSEG00000010401	sf3a3	100	89.820	ENSOPRG00000012785	SF3A3	100	89.820	Ochotona_princeps
ENSCSEG00000010401	sf3a3	100	85.828	ENSODEG00000007470	-	100	85.828	Octodon_degus
ENSCSEG00000010401	sf3a3	100	75.697	ENSODEG00000000937	-	100	78.088	Octodon_degus
ENSCSEG00000010401	sf3a3	100	78.643	ENSODEG00000018393	-	100	78.443	Octodon_degus
ENSCSEG00000010401	sf3a3	100	84.431	ENSODEG00000006854	-	100	87.026	Octodon_degus
ENSCSEG00000010401	sf3a3	87	95.172	ENSONIG00000010296	sf3a3	100	95.172	Oreochromis_niloticus
ENSCSEG00000010401	sf3a3	94	89.552	ENSOANG00000002473	SF3A3	100	89.552	Ornithorhynchus_anatinus
ENSCSEG00000010401	sf3a3	100	89.820	ENSOCUG00000005407	SF3A3	100	89.820	Oryctolagus_cuniculus
ENSCSEG00000010401	sf3a3	100	94.012	ENSORLG00000008175	sf3a3	100	94.012	Oryzias_latipes
ENSCSEG00000010401	sf3a3	100	93.812	ENSORLG00020013708	sf3a3	100	93.812	Oryzias_latipes_hni
ENSCSEG00000010401	sf3a3	100	93.613	ENSORLG00015004104	sf3a3	100	93.613	Oryzias_latipes_hsok
ENSCSEG00000010401	sf3a3	100	94.810	ENSOMEG00000020177	sf3a3	100	94.810	Oryzias_melastigma
ENSCSEG00000010401	sf3a3	100	89.621	ENSOARG00000019950	SF3A3	100	89.621	Ovis_aries
ENSCSEG00000010401	sf3a3	100	68.862	ENSPPAG00000039955	-	100	68.663	Pan_paniscus
ENSCSEG00000010401	sf3a3	100	89.621	ENSPPAG00000034066	SF3A3	100	89.621	Pan_paniscus
ENSCSEG00000010401	sf3a3	100	89.621	ENSPPRG00000001258	SF3A3	100	89.621	Panthera_pardus
ENSCSEG00000010401	sf3a3	100	89.621	ENSPTIG00000007515	SF3A3	100	89.621	Panthera_tigris_altaica
ENSCSEG00000010401	sf3a3	100	89.621	ENSPTRG00000000559	SF3A3	100	89.621	Pan_troglodytes
ENSCSEG00000010401	sf3a3	100	69.860	ENSPTRG00000046013	-	100	69.661	Pan_troglodytes
ENSCSEG00000010401	sf3a3	87	81.818	ENSPANG00000031214	-	100	65.070	Papio_anubis
ENSCSEG00000010401	sf3a3	100	89.621	ENSPANG00000021859	SF3A3	100	89.621	Papio_anubis
ENSCSEG00000010401	sf3a3	100	77.445	ENSPANG00000029393	-	100	78.842	Papio_anubis
ENSCSEG00000010401	sf3a3	100	92.415	ENSPKIG00000004719	sf3a3	100	92.415	Paramormyrops_kingsleyae
ENSCSEG00000010401	sf3a3	100	87.873	ENSPSIG00000004273	SF3A3	100	87.873	Pelodiscus_sinensis
ENSCSEG00000010401	sf3a3	99	85.652	ENSPMGG00000003610	sf3a3	94	93.435	Periophthalmus_magnuspinnatus
ENSCSEG00000010401	sf3a3	100	90.220	ENSPEMG00000020805	Sf3a3	100	90.220	Peromyscus_maniculatus_bairdii
ENSCSEG00000010401	sf3a3	61	72.963	ENSPMAG00000001044	sf3a3	98	77.037	Petromyzon_marinus
ENSCSEG00000010401	sf3a3	100	89.820	ENSPCIG00000025719	SF3A3	100	89.820	Phascolarctos_cinereus
ENSCSEG00000010401	sf3a3	100	94.411	ENSPFOG00000005284	sf3a3	100	94.411	Poecilia_formosa
ENSCSEG00000010401	sf3a3	99	91.147	ENSPLAG00000003979	sf3a3	92	91.147	Poecilia_latipinna
ENSCSEG00000010401	sf3a3	78	89.313	ENSPMEG00000021132	sf3a3	88	89.313	Poecilia_mexicana
ENSCSEG00000010401	sf3a3	100	94.810	ENSPREG00000013802	sf3a3	100	94.810	Poecilia_reticulata
ENSCSEG00000010401	sf3a3	100	87.625	ENSPPYG00000001519	SF3A3	100	87.625	Pongo_abelii
ENSCSEG00000010401	sf3a3	100	83.433	ENSPCAG00000010734	SF3A3	100	83.433	Procavia_capensis
ENSCSEG00000010401	sf3a3	100	79.324	ENSPCOG00000020389	-	100	79.324	Propithecus_coquereli
ENSCSEG00000010401	sf3a3	100	74.251	ENSPCOG00000017131	-	100	74.251	Propithecus_coquereli
ENSCSEG00000010401	sf3a3	85	95.935	ENSPVAG00000010158	SF3A3	100	78.244	Pteropus_vampyrus
ENSCSEG00000010401	sf3a3	100	95.210	ENSPNYG00000000786	sf3a3	100	95.210	Pundamilia_nyererei
ENSCSEG00000010401	sf3a3	100	94.212	ENSPNAG00000010298	sf3a3	100	94.212	Pygocentrus_nattereri
ENSCSEG00000010401	sf3a3	100	90.220	ENSRNOG00000007629	Sf3a3	100	90.220	Rattus_norvegicus
ENSCSEG00000010401	sf3a3	100	67.465	ENSRBIG00000041123	-	100	67.465	Rhinopithecus_bieti
ENSCSEG00000010401	sf3a3	100	89.621	ENSRBIG00000043567	SF3A3	100	89.621	Rhinopithecus_bieti
ENSCSEG00000010401	sf3a3	100	66.467	ENSRBIG00000043833	-	100	66.467	Rhinopithecus_bieti
ENSCSEG00000010401	sf3a3	99	70.938	ENSRROG00000032346	-	100	71.642	Rhinopithecus_roxellana
ENSCSEG00000010401	sf3a3	100	89.621	ENSRROG00000033888	SF3A3	100	89.621	Rhinopithecus_roxellana
ENSCSEG00000010401	sf3a3	89	87.129	ENSSBOG00000032688	SF3A3	100	87.129	Saimiri_boliviensis_boliviensis
ENSCSEG00000010401	sf3a3	100	65.269	ENSSBOG00000026932	-	100	64.471	Saimiri_boliviensis_boliviensis
ENSCSEG00000010401	sf3a3	90	90.287	ENSSHAG00000014530	SF3A3	100	90.287	Sarcophilus_harrisii
ENSCSEG00000010401	sf3a3	100	94.810	ENSSFOG00015005975	sf3a3	100	94.810	Scleropages_formosus
ENSCSEG00000010401	sf3a3	100	95.808	ENSSMAG00000020213	sf3a3	100	95.808	Scophthalmus_maximus
ENSCSEG00000010401	sf3a3	100	92.216	ENSSDUG00000011590	sf3a3	100	92.216	Seriola_dumerili
ENSCSEG00000010401	sf3a3	100	96.607	ENSSLDG00000020635	sf3a3	100	96.607	Seriola_lalandi_dorsalis
ENSCSEG00000010401	sf3a3	100	88.822	ENSSPUG00000004010	SF3A3	100	88.822	Sphenodon_punctatus
ENSCSEG00000010401	sf3a3	100	96.407	ENSSPAG00000018653	sf3a3	100	96.407	Stegastes_partitus
ENSCSEG00000010401	sf3a3	100	89.621	ENSSSCG00000003643	SF3A3	100	89.621	Sus_scrofa
ENSCSEG00000010401	sf3a3	87	90.115	ENSTGUG00000001466	SF3A3	99	90.115	Taeniopygia_guttata
ENSCSEG00000010401	sf3a3	100	95.010	ENSTRUG00000009089	sf3a3	100	95.010	Takifugu_rubripes
ENSCSEG00000010401	sf3a3	100	94.036	ENSTNIG00000009800	sf3a3	100	94.036	Tetraodon_nigroviridis
ENSCSEG00000010401	sf3a3	100	78.443	ENSTBEG00000007614	SF3A3	100	78.443	Tupaia_belangeri
ENSCSEG00000010401	sf3a3	100	89.421	ENSTTRG00000013519	SF3A3	100	89.421	Tursiops_truncatus
ENSCSEG00000010401	sf3a3	100	89.621	ENSUAMG00000006134	SF3A3	100	89.621	Ursus_americanus
ENSCSEG00000010401	sf3a3	100	89.621	ENSUMAG00000021250	SF3A3	100	89.621	Ursus_maritimus
ENSCSEG00000010401	sf3a3	66	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSCSEG00000010401	sf3a3	100	85.828	ENSVVUG00000022908	SF3A3	100	85.828	Vulpes_vulpes
ENSCSEG00000010401	sf3a3	100	88.024	ENSXETG00000022923	sf3a3	100	88.024	Xenopus_tropicalis
ENSCSEG00000010401	sf3a3	100	94.611	ENSXMAG00000017165	sf3a3	100	94.611	Xiphophorus_maculatus