EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010402 (Gene tree)
Gene ID: 103382846
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-19-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 13276 bases
Position: chr8:24014317-24027592
Accession: 103382846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016168	MMR_HSR1	PF01926.23	7.5e-05	1	1
ENSCSEP00000016187	MMR_HSR1	PF01926.23	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016375	-	6249	XM_008315778	ENSCSEP00000016168	218 (aa)	XP_008314000	UPI0004970FCC
ENSCSET00000016395	-	657	-	ENSCSEP00000016187	218 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000010402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010402	-	98	39.189	ENSCSEG00000011996	rab11al	98	39.189
ENSCSEG00000010402	-	96	41.935	ENSCSEG00000007239	-	97	41.935
ENSCSEG00000010402	-	81	41.573	ENSCSEG00000016803	rab18b	89	41.573
ENSCSEG00000010402	-	80	44.444	ENSCSEG00000006243	zgc:101559	76	44.444
ENSCSEG00000010402	-	77	43.713	ENSCSEG00000000205	RAB15	80	43.713
ENSCSEG00000010402	-	80	45.000	ENSCSEG00000017861	-	84	45.000
ENSCSEG00000010402	-	99	40.465	ENSCSEG00000007383	rab11a	99	40.465
ENSCSEG00000010402	-	75	35.714	ENSCSEG00000010116	rab9a	78	35.714
ENSCSEG00000010402	-	84	38.587	ENSCSEG00000016933	rab12	84	36.893
ENSCSEG00000010402	-	77	46.067	ENSCSEG00000016284	rab33a	63	46.067
ENSCSEG00000010402	-	80	45.000	ENSCSEG00000019722	RAB39B	84	45.000
ENSCSEG00000010402	-	72	36.420	ENSCSEG00000012961	rab34a	62	36.420
ENSCSEG00000010402	-	73	31.138	ENSCSEG00000018987	si:ch73-116o1.2	77	31.138
ENSCSEG00000010402	-	82	46.067	ENSCSEG00000017211	rab2a	78	47.904
ENSCSEG00000010402	-	96	38.318	ENSCSEG00000017026	rab25a	97	38.318
ENSCSEG00000010402	-	95	41.315	ENSCSEG00000016498	rab14	96	41.315
ENSCSEG00000010402	-	78	51.479	ENSCSEG00000002358	rab13	84	51.479
ENSCSEG00000010402	-	89	46.667	ENSCSEG00000020977	-	95	46.667
ENSCSEG00000010402	-	76	45.238	ENSCSEG00000010582	rab42a	77	45.238
ENSCSEG00000010402	-	90	46.701	ENSCSEG00000018732	rab1ba	97	46.939
ENSCSEG00000010402	-	75	38.690	ENSCSEG00000002970	RAB7A	75	38.690
ENSCSEG00000010402	-	89	41.538	ENSCSEG00000011816	rab18a	94	41.538
ENSCSEG00000010402	-	89	38.571	ENSCSEG00000020348	rab33ba	88	38.571
ENSCSEG00000010402	-	74	38.272	ENSCSEG00000003122	rab6ba	77	38.272
ENSCSEG00000010402	-	56	33.871	ENSCSEG00000007927	hrasb	85	30.675
ENSCSEG00000010402	-	76	34.320	ENSCSEG00000014467	rab9b	76	34.320
ENSCSEG00000010402	-	50	50.000	ENSCSEG00000009988	si:dkey-16l2.16	82	50.000
ENSCSEG00000010402	-	90	42.424	ENSCSEG00000011982	rab25b	97	40.826
ENSCSEG00000010402	-	74	30.000	ENSCSEG00000020208	rasl11b	68	30.000
ENSCSEG00000010402	-	58	35.938	ENSCSEG00000005737	kras	87	32.934
ENSCSEG00000010402	-	76	30.723	ENSCSEG00000005479	rabl2	72	30.539
ENSCSEG00000010402	-	77	32.749	ENSCSEG00000015770	si:cabz01085950.1	84	32.749
ENSCSEG00000010402	-	95	45.283	ENSCSEG00000014416	zgc:171927	98	45.283
ENSCSEG00000010402	-	75	38.690	ENSCSEG00000005357	-	81	38.690
ENSCSEG00000010402	-	74	39.506	ENSCSEG00000016556	rab6bb	77	39.506
ENSCSEG00000010402	-	72	30.233	ENSCSEG00000021772	arl8ba	87	30.233
ENSCSEG00000010402	-	85	50.000	ENSCSEG00000007292	rab30	93	50.000
ENSCSEG00000010402	-	65	36.879	ENSCSEG00000010565	rab23	79	34.969
ENSCSEG00000010402	-	78	47.337	ENSCSEG00000013400	rab35b	98	41.784
ENSCSEG00000010402	-	82	33.702	ENSCSEG00000016611	rheb	96	33.702
ENSCSEG00000010402	-	82	42.458	ENSCSEG00000003768	rab15	76	42.458
ENSCSEG00000010402	-	99	40.991	ENSCSEG00000007121	rab11ba	83	40.991
ENSCSEG00000010402	-	96	41.935	ENSCSEG00000012149	rab11bb	97	41.935
ENSCSEG00000010402	-	74	39.506	ENSCSEG00000004941	rab41	76	39.506
ENSCSEG00000010402	-	76	33.333	ENSCSEG00000003537	rhebl1	90	33.333
ENSCSEG00000010402	-	67	40.789	ENSCSEG00000014479	-	62	40.789
ENSCSEG00000010402	-	97	39.910	ENSCSEG00000019183	si:dkey-34d22.5	99	39.910
ENSCSEG00000010402	-	68	32.927	ENSCSEG00000018133	rab34b	65	32.927
ENSCSEG00000010402	-	74	41.358	ENSCSEG00000019797	rab22a	83	41.358
ENSCSEG00000010402	-	74	43.827	ENSCSEG00000017024	rab5c	73	43.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010402	-	74	90.683	ENSAOCG00000015948	-	77	90.683	Amphiprion_ocellaris
ENSCSEG00000010402	-	100	81.081	ENSATEG00000012781	-	100	81.081	Anabas_testudineus
ENSCSEG00000010402	-	100	79.018	ENSACLG00000000860	-	100	79.018	Astatotilapia_calliptera
ENSCSEG00000010402	-	99	75.000	ENSAMXG00000039737	RAB19	99	75.000	Astyanax_mexicanus
ENSCSEG00000010402	-	100	64.220	ENSCPBG00000011914	RAB19	99	64.220	Chrysemys_picta_bellii
ENSCSEG00000010402	-	100	66.055	ENSFALG00000003709	RAB19	98	66.055	Ficedula_albicollis
ENSCSEG00000010402	-	100	83.408	ENSGACG00000018847	-	99	83.408	Gasterosteus_aculeatus
ENSCSEG00000010402	-	93	66.176	ENSGAGG00000013139	RAB19	93	66.176	Gopherus_agassizii
ENSCSEG00000010402	-	99	66.063	ENSIPUG00000012509	-	99	66.063	Ictalurus_punctatus
ENSCSEG00000010402	-	96	66.197	ENSIPUG00000016261	RAB19	94	66.197	Ictalurus_punctatus
ENSCSEG00000010402	-	100	81.166	ENSKMAG00000012657	-	100	81.166	Kryptolebias_marmoratus
ENSCSEG00000010402	-	85	84.865	ENSMZEG00005010813	-	99	75.463	Maylandia_zebra
ENSCSEG00000010402	-	97	80.645	ENSONIG00000016851	-	100	80.645	Oreochromis_niloticus
ENSCSEG00000010402	-	97	80.841	ENSPMGG00000007381	-	97	80.841	Periophthalmus_magnuspinnatus
ENSCSEG00000010402	-	97	71.495	ENSPMGG00000009466	RAB19	96	71.495	Periophthalmus_magnuspinnatus
ENSCSEG00000010402	-	98	80.000	ENSPNYG00000008498	-	98	80.000	Pundamilia_nyererei
ENSCSEG00000010402	-	100	77.232	ENSTNIG00000018498	-	99	77.232	Tetraodon_nigroviridis
ENSCSEG00000010402	-	91	74.752	ENSTNIG00000006650	RAB19	93	74.752	Tetraodon_nigroviridis