EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010582 (Gene tree)
Gene ID: 103394714
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3238 bases
Position: chr18:14906262-14909499
Accession: 103394714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016460	MMR_HSR1	PF01926.23	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016668	-	657	XM_008332143	ENSCSEP00000016460	218 (aa)	XP_008330365	UPI000496537B

Gene Model

Click here to download ENSCSEG00000010582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010582	rab42a	83	41.111	ENSCSEG00000011982	rab25b	92	39.512
ENSCSEG00000010582	rab42a	67	40.132	ENSCSEG00000014479	-	62	40.132
ENSCSEG00000010582	rab42a	76	43.636	ENSCSEG00000013400	rab35b	81	43.636
ENSCSEG00000010582	rab42a	100	52.752	ENSCSEG00000019722	RAB39B	100	52.752
ENSCSEG00000010582	rab42a	65	34.752	ENSCSEG00000010565	rab23	74	34.641
ENSCSEG00000010582	rab42a	84	42.077	ENSCSEG00000007239	-	83	42.077
ENSCSEG00000010582	rab42a	100	54.128	ENSCSEG00000017861	-	100	54.128
ENSCSEG00000010582	rab42a	72	36.025	ENSCSEG00000011820	rras	85	34.483
ENSCSEG00000010582	rab42a	72	38.854	ENSCSEG00000016556	rab6bb	75	38.854
ENSCSEG00000010582	rab42a	84	31.694	ENSCSEG00000016611	rheb	92	31.694
ENSCSEG00000010582	rab42a	69	41.060	ENSCSEG00000020348	rab33ba	63	41.060
ENSCSEG00000010582	rab42a	91	32.512	ENSCSEG00000012961	rab34a	78	32.512
ENSCSEG00000010582	rab42a	76	34.940	ENSCSEG00000009987	rras2	81	34.940
ENSCSEG00000010582	rab42a	72	39.490	ENSCSEG00000004941	rab41	73	39.490
ENSCSEG00000010582	rab42a	84	42.077	ENSCSEG00000012149	rab11bb	83	42.077
ENSCSEG00000010582	rab42a	74	34.940	ENSCSEG00000005357	-	79	34.940
ENSCSEG00000010582	rab42a	78	41.420	ENSCSEG00000002358	rab13	84	41.420
ENSCSEG00000010582	rab42a	84	43.169	ENSCSEG00000007121	rab11ba	70	43.169
ENSCSEG00000010582	rab42a	71	35.032	ENSCSEG00000018133	rab34b	62	35.032
ENSCSEG00000010582	rab42a	87	47.368	ENSCSEG00000017211	rab2a	89	47.368
ENSCSEG00000010582	rab42a	75	39.521	ENSCSEG00000014467	rab9b	75	39.521
ENSCSEG00000010582	rab42a	76	38.235	ENSCSEG00000010116	rab9a	79	38.235
ENSCSEG00000010582	rab42a	78	30.645	ENSCSEG00000000717	rasl11a	71	30.645
ENSCSEG00000010582	rab42a	93	40.099	ENSCSEG00000017026	rab25a	93	40.099
ENSCSEG00000010582	rab42a	84	40.761	ENSCSEG00000018732	rab1ba	91	40.761
ENSCSEG00000010582	rab42a	90	40.306	ENSCSEG00000007383	rab11a	90	40.306
ENSCSEG00000010582	rab42a	67	41.892	ENSCSEG00000006243	zgc:101559	63	41.892
ENSCSEG00000010582	rab42a	69	33.113	ENSCSEG00000007927	hrasb	85	32.317
ENSCSEG00000010582	rab42a	76	40.606	ENSCSEG00000016803	rab18b	83	40.606
ENSCSEG00000010582	rab42a	72	39.375	ENSCSEG00000016284	rab33a	58	39.264
ENSCSEG00000010582	rab42a	98	39.252	ENSCSEG00000016498	rab14	97	39.252
ENSCSEG00000010582	rab42a	52	31.858	ENSCSEG00000015746	-	86	32.540
ENSCSEG00000010582	rab42a	97	39.623	ENSCSEG00000011996	rab11al	95	39.623
ENSCSEG00000010582	rab42a	74	33.333	ENSCSEG00000002970	RAB7A	74	33.333
ENSCSEG00000010582	rab42a	97	34.434	ENSCSEG00000003122	rab6ba	94	34.434
ENSCSEG00000010582	rab42a	76	39.394	ENSCSEG00000011816	rab18a	80	39.394
ENSCSEG00000010582	rab42a	75	37.805	ENSCSEG00000017024	rab5c	74	37.805
ENSCSEG00000010582	rab42a	79	43.605	ENSCSEG00000020977	-	83	43.605
ENSCSEG00000010582	rab42a	80	42.857	ENSCSEG00000014416	zgc:171927	81	42.857
ENSCSEG00000010582	rab42a	73	43.750	ENSCSEG00000007292	rab30	78	43.750
ENSCSEG00000010582	rab42a	74	31.707	ENSCSEG00000005479	rabl2	70	31.707
ENSCSEG00000010582	rab42a	73	32.298	ENSCSEG00000005737	kras	90	31.609
ENSCSEG00000010582	rab42a	98	55.963	ENSCSEG00000019183	si:dkey-34d22.5	98	55.963
ENSCSEG00000010582	rab42a	74	42.857	ENSCSEG00000000205	RAB15	77	42.857
ENSCSEG00000010582	rab42a	78	40.698	ENSCSEG00000016933	rab12	70	40.698
ENSCSEG00000010582	rab42a	75	36.585	ENSCSEG00000019797	rab22a	84	36.585
ENSCSEG00000010582	rab42a	70	35.443	ENSCSEG00000018987	si:ch73-116o1.2	79	35.294
ENSCSEG00000010582	rab42a	96	36.916	ENSCSEG00000003768	rab15	87	36.916
ENSCSEG00000010582	rab42a	77	30.539	ENSCSEG00000003537	rhebl1	88	30.539
ENSCSEG00000010582	rab42a	77	45.238	ENSCSEG00000010402	-	76	45.238
ENSCSEG00000010582	rab42a	75	31.928	ENSCSEG00000015770	si:cabz01085950.1	82	31.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010582	rab42a	100	93.578	ENSAPOG00000009188	rab42a	100	93.578	Acanthochromis_polyacanthus
ENSCSEG00000010582	rab42a	100	93.578	ENSACIG00000003102	rab42a	100	93.578	Amphilophus_citrinellus
ENSCSEG00000010582	rab42a	100	93.119	ENSAOCG00000012921	rab42a	83	93.119	Amphiprion_ocellaris
ENSCSEG00000010582	rab42a	100	93.119	ENSAPEG00000007713	rab42a	83	93.119	Amphiprion_percula
ENSCSEG00000010582	rab42a	100	91.743	ENSATEG00000009052	rab42a	100	91.743	Anabas_testudineus
ENSCSEG00000010582	rab42a	100	93.578	ENSACLG00000007514	rab42a	100	93.578	Astatotilapia_calliptera
ENSCSEG00000010582	rab42a	100	88.991	ENSAMXG00000032729	rab42a	100	88.991	Astyanax_mexicanus
ENSCSEG00000010582	rab42a	100	87.615	ENSDARG00000034215	rab42a	100	87.615	Danio_rerio
ENSCSEG00000010582	rab42a	100	47.489	ENSDARG00000102580	CU571310.1	99	47.489	Danio_rerio
ENSCSEG00000010582	rab42a	100	87.615	ENSELUG00000010345	rab42a	100	87.615	Esox_lucius
ENSCSEG00000010582	rab42a	100	92.661	ENSFHEG00000013106	rab42a	100	92.661	Fundulus_heteroclitus
ENSCSEG00000010582	rab42a	100	92.661	ENSGAFG00000002141	rab42a	100	92.661	Gambusia_affinis
ENSCSEG00000010582	rab42a	100	93.578	ENSHBUG00000015126	rab42a	82	93.578	Haplochromis_burtoni
ENSCSEG00000010582	rab42a	100	85.780	ENSIPUG00000011376	rab42a	100	85.780	Ictalurus_punctatus
ENSCSEG00000010582	rab42a	100	91.743	ENSKMAG00000007267	rab42a	100	91.743	Kryptolebias_marmoratus
ENSCSEG00000010582	rab42a	100	93.119	ENSLBEG00000001193	rab42a	100	94.037	Labrus_bergylta
ENSCSEG00000010582	rab42a	100	64.220	ENSLACG00000012755	-	100	64.220	Latimeria_chalumnae
ENSCSEG00000010582	rab42a	100	82.110	ENSLOCG00000003453	rab42a	100	82.110	Lepisosteus_oculatus
ENSCSEG00000010582	rab42a	100	52.968	ENSLOCG00000015825	-	99	52.968	Lepisosteus_oculatus
ENSCSEG00000010582	rab42a	100	94.954	ENSMAMG00000002296	rab42a	100	94.954	Mastacembelus_armatus
ENSCSEG00000010582	rab42a	100	93.578	ENSMZEG00005012460	rab42a	82	93.578	Maylandia_zebra
ENSCSEG00000010582	rab42a	100	90.367	ENSMMOG00000014358	rab42a	100	90.367	Mola_mola
ENSCSEG00000010582	rab42a	100	94.037	ENSNBRG00000021487	rab42a	82	94.037	Neolamprologus_brichardi
ENSCSEG00000010582	rab42a	100	93.119	ENSORLG00000022335	rab42a	100	93.119	Oryzias_latipes
ENSCSEG00000010582	rab42a	100	93.119	ENSORLG00020013895	rab42a	100	93.119	Oryzias_latipes_hni
ENSCSEG00000010582	rab42a	100	93.119	ENSORLG00015004273	rab42a	100	93.119	Oryzias_latipes_hsok
ENSCSEG00000010582	rab42a	100	93.119	ENSOMEG00000020418	rab42a	100	93.119	Oryzias_melastigma
ENSCSEG00000010582	rab42a	89	48.718	ENSPKIG00000015234	-	93	48.718	Paramormyrops_kingsleyae
ENSCSEG00000010582	rab42a	100	76.147	ENSPKIG00000021215	-	100	76.147	Paramormyrops_kingsleyae
ENSCSEG00000010582	rab42a	90	93.909	ENSPMGG00000024112	rab42a	90	93.909	Periophthalmus_magnuspinnatus
ENSCSEG00000010582	rab42a	100	91.743	ENSPFOG00000004838	rab42a	82	91.743	Poecilia_formosa
ENSCSEG00000010582	rab42a	100	92.202	ENSPLAG00000005628	rab42a	100	92.202	Poecilia_latipinna
ENSCSEG00000010582	rab42a	100	91.743	ENSPMEG00000019497	rab42a	100	91.743	Poecilia_mexicana
ENSCSEG00000010582	rab42a	100	92.661	ENSPREG00000013962	rab42a	100	92.661	Poecilia_reticulata
ENSCSEG00000010582	rab42a	100	93.578	ENSPNYG00000010325	rab42a	82	93.578	Pundamilia_nyererei
ENSCSEG00000010582	rab42a	100	88.532	ENSPNAG00000016567	rab42a	100	88.532	Pygocentrus_nattereri
ENSCSEG00000010582	rab42a	100	82.110	ENSSFOG00015020732	rab42a	100	82.110	Scleropages_formosus
ENSCSEG00000010582	rab42a	100	46.575	ENSSFOG00015016000	-	97	46.575	Scleropages_formosus
ENSCSEG00000010582	rab42a	100	92.202	ENSSMAG00000020311	rab42a	100	92.202	Scophthalmus_maximus
ENSCSEG00000010582	rab42a	100	94.037	ENSSDUG00000011851	rab42a	100	94.037	Seriola_dumerili
ENSCSEG00000010582	rab42a	100	94.037	ENSSLDG00000020354	rab42a	100	94.037	Seriola_lalandi_dorsalis
ENSCSEG00000010582	rab42a	100	94.954	ENSSPAG00000016167	rab42a	100	94.954	Stegastes_partitus
ENSCSEG00000010582	rab42a	100	93.119	ENSTRUG00000010224	rab42a	100	93.119	Takifugu_rubripes
ENSCSEG00000010582	rab42a	100	92.202	ENSXCOG00000003428	rab42a	100	92.202	Xiphophorus_couchianus
ENSCSEG00000010582	rab42a	100	92.202	ENSXMAG00000028376	rab42a	100	92.202	Xiphophorus_maculatus