EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010631 (Gene tree)
Gene ID: 103386385
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5089 bases
Position: chr11:12394137-12399225
Accession: 103386385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016542	dsrm	PF00035.26	2.3e-34	1	2
ENSCSEP00000016542	dsrm	PF00035.26	2.3e-34	2	2
ENSCSEP00000016547	dsrm	PF00035.26	2.8e-34	1	2
ENSCSEP00000016547	dsrm	PF00035.26	2.8e-34	2	2
ENSCSEP00000016542	DND1_DSRM	PF14709.7	1.4e-11	1	1
ENSCSEP00000016547	DND1_DSRM	PF14709.7	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016754	-	1011	-	ENSCSEP00000016542	336 (aa)	-	-
ENSCSET00000016759	-	1038	XM_008320622	ENSCSEP00000016547	345 (aa)	XP_008318844	UPI00049825B4

Gene Model

Click here to download ENSCSEG00000010631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010631	tarbp2	92	43.082	ENSCSEG00000002954	prkra	85	44.156

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010631	tarbp2	100	66.940	ENSG00000139546	TARBP2	100	67.919	Homo_sapiens
ENSCSEG00000010631	tarbp2	100	92.464	ENSAPOG00000019892	tarbp2	100	92.464	Acanthochromis_polyacanthus
ENSCSEG00000010631	tarbp2	100	66.667	ENSAMEG00000012601	TARBP2	100	67.030	Ailuropoda_melanoleuca
ENSCSEG00000010631	tarbp2	100	90.145	ENSACIG00000016780	tarbp2	100	90.145	Amphilophus_citrinellus
ENSCSEG00000010631	tarbp2	100	92.754	ENSAOCG00000005201	tarbp2	100	92.754	Amphiprion_ocellaris
ENSCSEG00000010631	tarbp2	100	92.754	ENSAPEG00000008376	tarbp2	100	92.754	Amphiprion_percula
ENSCSEG00000010631	tarbp2	100	92.464	ENSATEG00000025012	tarbp2	100	92.464	Anabas_testudineus
ENSCSEG00000010631	tarbp2	100	68.785	ENSACAG00000001100	TARBP2	100	68.681	Anolis_carolinensis
ENSCSEG00000010631	tarbp2	100	66.120	ENSANAG00000034453	TARBP2	94	78.378	Aotus_nancymaae
ENSCSEG00000010631	tarbp2	98	89.021	ENSACLG00000018569	tarbp2	98	89.021	Astatotilapia_calliptera
ENSCSEG00000010631	tarbp2	100	83.237	ENSAMXG00000016665	tarbp2	100	83.237	Astyanax_mexicanus
ENSCSEG00000010631	tarbp2	100	66.940	ENSBTAG00000000435	TARBP2	100	67.030	Bos_taurus
ENSCSEG00000010631	tarbp2	100	66.120	ENSCJAG00000018668	TARBP2	100	66.485	Callithrix_jacchus
ENSCSEG00000010631	tarbp2	100	69.164	ENSCAFG00000006874	TARBP2	100	69.164	Canis_familiaris
ENSCSEG00000010631	tarbp2	100	67.213	ENSCAFG00020020735	TARBP2	100	68.208	Canis_lupus_dingo
ENSCSEG00000010631	tarbp2	100	65.946	ENSCHIG00000026017	TARBP2	100	66.038	Capra_hircus
ENSCSEG00000010631	tarbp2	100	67.213	ENSTSYG00000035683	TARBP2	94	78.378	Carlito_syrichta
ENSCSEG00000010631	tarbp2	65	71.493	ENSCAPG00000008981	TARBP2	99	70.982	Cavia_aperea
ENSCSEG00000010631	tarbp2	100	66.576	ENSCPOG00000001009	TARBP2	100	66.120	Cavia_porcellus
ENSCSEG00000010631	tarbp2	99	65.840	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSCSEG00000010631	tarbp2	100	66.667	ENSCATG00000026344	TARBP2	94	78.378	Cercocebus_atys
ENSCSEG00000010631	tarbp2	100	66.393	ENSCLAG00000009175	TARBP2	100	65.847	Chinchilla_lanigera
ENSCSEG00000010631	tarbp2	100	66.667	ENSCSAG00000005479	TARBP2	100	66.485	Chlorocebus_sabaeus
ENSCSEG00000010631	tarbp2	100	69.529	ENSCPBG00000000654	TARBP2	100	70.294	Chrysemys_picta_bellii
ENSCSEG00000010631	tarbp2	100	66.940	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSCSEG00000010631	tarbp2	100	66.575	ENSCGRG00001011856	TARBP2	100	65.479	Cricetulus_griseus_chok1gshd
ENSCSEG00000010631	tarbp2	100	66.575	ENSCGRG00000009088	TARBP2	100	66.667	Cricetulus_griseus_crigri
ENSCSEG00000010631	tarbp2	100	88.986	ENSCVAG00000009832	tarbp2	100	88.986	Cyprinodon_variegatus
ENSCSEG00000010631	tarbp2	100	81.322	ENSDARG00000070471	tarbp2	100	81.322	Danio_rerio
ENSCSEG00000010631	tarbp2	100	66.940	ENSDNOG00000002144	TARBP2	100	66.120	Dasypus_novemcinctus
ENSCSEG00000010631	tarbp2	65	71.946	ENSDORG00000001390	Tarbp2	91	71.946	Dipodomys_ordii
ENSCSEG00000010631	tarbp2	87	85.870	ENSETEG00000002458	TARBP2	74	83.562	Echinops_telfairi
ENSCSEG00000010631	tarbp2	94	59.875	ENSEBUG00000002377	tarbp2	98	60.815	Eptatretus_burgeri
ENSCSEG00000010631	tarbp2	100	66.940	ENSEASG00005010030	TARBP2	100	66.120	Equus_asinus_asinus
ENSCSEG00000010631	tarbp2	100	70.487	ENSECAG00000011695	TARBP2	94	78.378	Equus_caballus
ENSCSEG00000010631	tarbp2	84	64.103	ENSEEUG00000001128	-	99	63.462	Erinaceus_europaeus
ENSCSEG00000010631	tarbp2	100	83.621	ENSELUG00000010642	tarbp2	100	85.345	Esox_lucius
ENSCSEG00000010631	tarbp2	100	67.760	ENSFCAG00000007757	TARBP2	100	67.302	Felis_catus
ENSCSEG00000010631	tarbp2	100	66.667	ENSFDAG00000011932	TARBP2	100	68.033	Fukomys_damarensis
ENSCSEG00000010631	tarbp2	94	90.123	ENSFHEG00000016118	tarbp2	100	90.123	Fundulus_heteroclitus
ENSCSEG00000010631	tarbp2	100	85.879	ENSGMOG00000001290	tarbp2	100	85.879	Gadus_morhua
ENSCSEG00000010631	tarbp2	65	71.689	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSCSEG00000010631	tarbp2	100	88.986	ENSGAFG00000013341	tarbp2	100	88.986	Gambusia_affinis
ENSCSEG00000010631	tarbp2	100	87.042	ENSGACG00000006645	tarbp2	100	86.479	Gasterosteus_aculeatus
ENSCSEG00000010631	tarbp2	100	69.806	ENSGAGG00000021169	TARBP2	100	68.508	Gopherus_agassizii
ENSCSEG00000010631	tarbp2	97	68.258	ENSGGOG00000012637	TARBP2	81	87.500	Gorilla_gorilla
ENSCSEG00000010631	tarbp2	100	89.855	ENSHBUG00000018639	tarbp2	100	89.855	Haplochromis_burtoni
ENSCSEG00000010631	tarbp2	100	66.393	ENSHGLG00000001284	TARBP2	100	65.574	Heterocephalus_glaber_female
ENSCSEG00000010631	tarbp2	100	66.393	ENSHGLG00100011274	TARBP2	100	65.574	Heterocephalus_glaber_male
ENSCSEG00000010631	tarbp2	100	84.058	ENSHCOG00000001027	tarbp2	100	84.058	Hippocampus_comes
ENSCSEG00000010631	tarbp2	100	82.235	ENSIPUG00000023701	tarbp2	100	82.235	Ictalurus_punctatus
ENSCSEG00000010631	tarbp2	97	69.101	ENSSTOG00000003678	TARBP2	100	68.033	Ictidomys_tridecemlineatus
ENSCSEG00000010631	tarbp2	100	90.145	ENSKMAG00000012142	tarbp2	100	90.145	Kryptolebias_marmoratus
ENSCSEG00000010631	tarbp2	100	89.548	ENSLBEG00000015027	tarbp2	100	89.548	Labrus_bergylta
ENSCSEG00000010631	tarbp2	95	64.742	ENSLACG00000007087	TARBP2	77	91.379	Latimeria_chalumnae
ENSCSEG00000010631	tarbp2	100	80.286	ENSLOCG00000005711	tarbp2	100	80.000	Lepisosteus_oculatus
ENSCSEG00000010631	tarbp2	72	64.552	ENSLAFG00000002620	TARBP2	68	91.379	Loxodonta_africana
ENSCSEG00000010631	tarbp2	100	66.667	ENSMFAG00000013567	TARBP2	94	78.378	Macaca_fascicularis
ENSCSEG00000010631	tarbp2	100	66.940	ENSMMUG00000018492	TARBP2	100	66.757	Macaca_mulatta
ENSCSEG00000010631	tarbp2	100	66.667	ENSMNEG00000036477	TARBP2	94	78.378	Macaca_nemestrina
ENSCSEG00000010631	tarbp2	100	66.667	ENSMLEG00000029583	TARBP2	94	78.378	Mandrillus_leucophaeus
ENSCSEG00000010631	tarbp2	94	89.720	ENSMAMG00000010272	tarbp2	97	86.257	Mastacembelus_armatus
ENSCSEG00000010631	tarbp2	100	90.435	ENSMZEG00005006895	tarbp2	100	90.435	Maylandia_zebra
ENSCSEG00000010631	tarbp2	100	66.301	ENSMAUG00000019805	Tarbp2	100	65.205	Mesocricetus_auratus
ENSCSEG00000010631	tarbp2	94	67.908	ENSMICG00000027441	TARBP2	94	78.378	Microcebus_murinus
ENSCSEG00000010631	tarbp2	100	67.751	ENSMOCG00000003691	Tarbp2	100	67.213	Microtus_ochrogaster
ENSCSEG00000010631	tarbp2	94	89.091	ENSMMOG00000010374	tarbp2	100	89.091	Mola_mola
ENSCSEG00000010631	tarbp2	100	91.594	ENSMALG00000009773	tarbp2	100	91.594	Monopterus_albus
ENSCSEG00000010631	tarbp2	100	66.575	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSCSEG00000010631	tarbp2	100	66.575	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSCSEG00000010631	tarbp2	100	65.753	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSCSEG00000010631	tarbp2	100	66.575	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSCSEG00000010631	tarbp2	100	66.575	ENSMPUG00000005944	TARBP2	100	66.667	Mustela_putorius_furo
ENSCSEG00000010631	tarbp2	100	67.486	ENSMLUG00000010035	TARBP2	100	66.940	Myotis_lucifugus
ENSCSEG00000010631	tarbp2	100	66.940	ENSNLEG00000017690	TARBP2	94	78.378	Nomascus_leucogenys
ENSCSEG00000010631	tarbp2	96	72.508	ENSMEUG00000001916	TARBP2	95	73.502	Notamacropus_eugenii
ENSCSEG00000010631	tarbp2	65	72.851	ENSOPRG00000011397	TARBP2	99	72.321	Ochotona_princeps
ENSCSEG00000010631	tarbp2	60	70.796	ENSODEG00000013413	TARBP2	100	69.469	Octodon_degus
ENSCSEG00000010631	tarbp2	95	86.207	ENSONIG00000005115	tarbp2	96	86.207	Oreochromis_niloticus
ENSCSEG00000010631	tarbp2	100	68.306	ENSOCUG00000005700	TARBP2	100	67.760	Oryctolagus_cuniculus
ENSCSEG00000010631	tarbp2	100	87.246	ENSORLG00000005209	tarbp2	100	87.246	Oryzias_latipes
ENSCSEG00000010631	tarbp2	100	87.536	ENSORLG00020017755	tarbp2	100	87.536	Oryzias_latipes_hni
ENSCSEG00000010631	tarbp2	100	87.246	ENSORLG00015013237	tarbp2	100	87.246	Oryzias_latipes_hsok
ENSCSEG00000010631	tarbp2	100	88.406	ENSOMEG00000018860	tarbp2	100	88.406	Oryzias_melastigma
ENSCSEG00000010631	tarbp2	100	66.120	ENSOGAG00000001744	TARBP2	100	66.213	Otolemur_garnettii
ENSCSEG00000010631	tarbp2	100	66.667	ENSOARG00000016437	TARBP2	100	66.757	Ovis_aries
ENSCSEG00000010631	tarbp2	100	66.940	ENSPPAG00000030429	TARBP2	94	78.378	Pan_paniscus
ENSCSEG00000010631	tarbp2	100	67.213	ENSPPRG00000000189	TARBP2	100	67.302	Panthera_pardus
ENSCSEG00000010631	tarbp2	100	68.144	ENSPTIG00000007859	TARBP2	100	67.222	Panthera_tigris_altaica
ENSCSEG00000010631	tarbp2	100	66.940	ENSPTRG00000005020	TARBP2	94	78.378	Pan_troglodytes
ENSCSEG00000010631	tarbp2	100	66.667	ENSPANG00000010689	TARBP2	94	78.378	Papio_anubis
ENSCSEG00000010631	tarbp2	100	78.371	ENSPKIG00000002455	tarbp2	100	78.371	Paramormyrops_kingsleyae
ENSCSEG00000010631	tarbp2	100	88.406	ENSPMGG00000006497	tarbp2	100	88.406	Periophthalmus_magnuspinnatus
ENSCSEG00000010631	tarbp2	100	65.753	ENSPEMG00000014285	Tarbp2	100	65.301	Peromyscus_maniculatus_bairdii
ENSCSEG00000010631	tarbp2	92	64.194	ENSPMAG00000000105	tarbp2	99	64.194	Petromyzon_marinus
ENSCSEG00000010631	tarbp2	100	70.435	ENSPCIG00000006672	TARBP2	92	70.435	Phascolarctos_cinereus
ENSCSEG00000010631	tarbp2	100	90.145	ENSPFOG00000007586	tarbp2	100	90.145	Poecilia_formosa
ENSCSEG00000010631	tarbp2	100	89.565	ENSPLAG00000017659	tarbp2	100	89.565	Poecilia_latipinna
ENSCSEG00000010631	tarbp2	100	90.145	ENSPMEG00000007775	tarbp2	100	90.145	Poecilia_mexicana
ENSCSEG00000010631	tarbp2	100	89.565	ENSPREG00000007815	tarbp2	100	89.565	Poecilia_reticulata
ENSCSEG00000010631	tarbp2	97	67.160	ENSPPYG00000004583	TARBP2	99	65.875	Pongo_abelii
ENSCSEG00000010631	tarbp2	78	64.948	ENSPCAG00000005352	TARBP2	60	72.851	Procavia_capensis
ENSCSEG00000010631	tarbp2	100	66.940	ENSPCOG00000013102	TARBP2	94	78.378	Propithecus_coquereli
ENSCSEG00000010631	tarbp2	100	65.847	ENSPVAG00000012286	TARBP2	100	64.754	Pteropus_vampyrus
ENSCSEG00000010631	tarbp2	100	90.145	ENSPNYG00000014125	tarbp2	100	90.145	Pundamilia_nyererei
ENSCSEG00000010631	tarbp2	100	83.237	ENSPNAG00000011128	tarbp2	100	83.237	Pygocentrus_nattereri
ENSCSEG00000010631	tarbp2	100	65.753	ENSRNOG00000042355	Tarbp2	100	65.574	Rattus_norvegicus
ENSCSEG00000010631	tarbp2	100	66.667	ENSRBIG00000027150	TARBP2	94	78.378	Rhinopithecus_bieti
ENSCSEG00000010631	tarbp2	100	66.667	ENSRROG00000044783	TARBP2	94	78.378	Rhinopithecus_roxellana
ENSCSEG00000010631	tarbp2	100	66.120	ENSSBOG00000027305	TARBP2	94	78.378	Saimiri_boliviensis_boliviensis
ENSCSEG00000010631	tarbp2	93	73.968	ENSSHAG00000007064	TARBP2	100	73.248	Sarcophilus_harrisii
ENSCSEG00000010631	tarbp2	100	79.666	ENSSFOG00015010784	tarbp2	100	79.050	Scleropages_formosus
ENSCSEG00000010631	tarbp2	100	89.744	ENSSMAG00000012769	tarbp2	100	89.744	Scophthalmus_maximus
ENSCSEG00000010631	tarbp2	100	92.754	ENSSDUG00000018818	tarbp2	100	92.754	Seriola_dumerili
ENSCSEG00000010631	tarbp2	100	92.754	ENSSLDG00000001835	tarbp2	100	92.754	Seriola_lalandi_dorsalis
ENSCSEG00000010631	tarbp2	76	69.154	ENSSARG00000001010	TARBP2	73	69.154	Sorex_araneus
ENSCSEG00000010631	tarbp2	98	53.333	ENSSPUG00000005895	TARBP2	67	88.333	Sphenodon_punctatus
ENSCSEG00000010631	tarbp2	100	92.174	ENSSPAG00000022797	tarbp2	100	92.174	Stegastes_partitus
ENSCSEG00000010631	tarbp2	100	66.667	ENSSSCG00000000276	TARBP2	100	68.208	Sus_scrofa
ENSCSEG00000010631	tarbp2	71	55.814	ENSTGUG00000017031	TARBP2	100	55.426	Taeniopygia_guttata
ENSCSEG00000010631	tarbp2	100	90.435	ENSTRUG00000014379	tarbp2	100	90.435	Takifugu_rubripes
ENSCSEG00000010631	tarbp2	100	88.986	ENSTNIG00000007065	tarbp2	100	88.986	Tetraodon_nigroviridis
ENSCSEG00000010631	tarbp2	50	71.006	ENSTBEG00000012751	-	54	71.006	Tupaia_belangeri
ENSCSEG00000010631	tarbp2	100	66.667	ENSTTRG00000017177	TARBP2	100	66.120	Tursiops_truncatus
ENSCSEG00000010631	tarbp2	100	67.760	ENSUAMG00000009011	TARBP2	100	67.302	Ursus_americanus
ENSCSEG00000010631	tarbp2	100	67.213	ENSUMAG00000010461	TARBP2	100	66.757	Ursus_maritimus
ENSCSEG00000010631	tarbp2	100	67.213	ENSVVUG00000028150	TARBP2	100	68.208	Vulpes_vulpes
ENSCSEG00000010631	tarbp2	98	69.886	ENSXETG00000012644	tarbp2	99	69.688	Xenopus_tropicalis
ENSCSEG00000010631	tarbp2	100	91.014	ENSXMAG00000017836	tarbp2	100	91.014	Xiphophorus_maculatus