EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000010739 (Gene tree)
Gene ID: 103384009
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 15816 bases
Position: chr9:13849716-13865531
Accession: 103384009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016693	Suf	PF05843.14	2.3e-05	1	1
ENSCSEP00000016693	S1	PF00575.23	1.8e-57	1	4
ENSCSEP00000016693	S1	PF00575.23	1.8e-57	2	4
ENSCSEP00000016693	S1	PF00575.23	1.8e-57	3	4
ENSCSEP00000016693	S1	PF00575.23	1.8e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016906	-	7933	XM_008317369	ENSCSEP00000016693	1762 (aa)	XP_008315591	-

Gene Model

Click here to download ENSCSEG00000010739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010739	pdcd11	99	43.845	ENSG00000148843	PDCD11	97	43.730	Homo_sapiens
ENSCSEG00000010739	pdcd11	99	75.141	ENSAPOG00000015629	pdcd11	97	74.859	Acanthochromis_polyacanthus
ENSCSEG00000010739	pdcd11	99	43.384	ENSAMEG00000017935	PDCD11	94	56.022	Ailuropoda_melanoleuca
ENSCSEG00000010739	pdcd11	52	66.484	ENSACIG00000006458	-	98	66.484	Amphilophus_citrinellus
ENSCSEG00000010739	pdcd11	99	75.141	ENSAOCG00000015287	pdcd11	97	74.802	Amphiprion_ocellaris
ENSCSEG00000010739	pdcd11	57	73.043	ENSAPEG00000020240	pdcd11	99	73.043	Amphiprion_percula
ENSCSEG00000010739	pdcd11	99	74.704	ENSATEG00000021043	pdcd11	97	74.887	Anabas_testudineus
ENSCSEG00000010739	pdcd11	99	43.818	ENSAPLG00000010301	PDCD11	97	43.471	Anas_platyrhynchos
ENSCSEG00000010739	pdcd11	99	44.302	ENSACAG00000004796	PDCD11	97	44.364	Anolis_carolinensis
ENSCSEG00000010739	pdcd11	99	43.583	ENSANAG00000034576	PDCD11	97	43.388	Aotus_nancymaae
ENSCSEG00000010739	pdcd11	92	83.128	ENSACLG00000018236	pdcd11	97	75.000	Astatotilapia_calliptera
ENSCSEG00000010739	pdcd11	99	47.841	ENSAMXG00000005458	pdcd11	98	51.200	Astyanax_mexicanus
ENSCSEG00000010739	pdcd11	99	43.934	ENSBTAG00000009715	PDCD11	75	42.386	Bos_taurus
ENSCSEG00000010739	pdcd11	99	43.583	ENSCJAG00000018257	PDCD11	97	43.607	Callithrix_jacchus
ENSCSEG00000010739	pdcd11	99	43.590	ENSCAFG00000010411	PDCD11	97	57.447	Canis_familiaris
ENSCSEG00000010739	pdcd11	99	44.075	ENSCAFG00020010369	PDCD11	97	44.211	Canis_lupus_dingo
ENSCSEG00000010739	pdcd11	99	43.856	ENSCHIG00000025218	PDCD11	97	43.395	Capra_hircus
ENSCSEG00000010739	pdcd11	95	43.337	ENSTSYG00000033423	PDCD11	97	42.849	Carlito_syrichta
ENSCSEG00000010739	pdcd11	95	36.397	ENSCAPG00000005386	PDCD11	96	36.336	Cavia_aperea
ENSCSEG00000010739	pdcd11	99	42.344	ENSCPOG00000010957	PDCD11	97	42.320	Cavia_porcellus
ENSCSEG00000010739	pdcd11	99	43.597	ENSCATG00000044331	PDCD11	97	43.488	Cercocebus_atys
ENSCSEG00000010739	pdcd11	99	42.841	ENSCLAG00000001029	PDCD11	97	42.512	Chinchilla_lanigera
ENSCSEG00000010739	pdcd11	99	43.590	ENSCSAG00000005346	PDCD11	97	43.474	Chlorocebus_sabaeus
ENSCSEG00000010739	pdcd11	81	65.116	ENSCHOG00000004796	PDCD11	76	65.116	Choloepus_hoffmanni
ENSCSEG00000010739	pdcd11	92	59.672	ENSCPBG00000024487	PDCD11	97	59.868	Chrysemys_picta_bellii
ENSCSEG00000010739	pdcd11	99	43.339	ENSCANG00000043300	PDCD11	97	43.481	Colobus_angolensis_palliatus
ENSCSEG00000010739	pdcd11	99	43.357	ENSCGRG00001006458	Pdcd11	97	43.452	Cricetulus_griseus_chok1gshd
ENSCSEG00000010739	pdcd11	99	43.279	ENSCGRG00000003583	Pdcd11	97	43.373	Cricetulus_griseus_crigri
ENSCSEG00000010739	pdcd11	95	68.439	ENSCVAG00000018903	pdcd11	96	68.815	Cyprinodon_variegatus
ENSCSEG00000010739	pdcd11	99	52.033	ENSDARG00000052480	pdcd11	97	52.482	Danio_rerio
ENSCSEG00000010739	pdcd11	99	43.067	ENSDNOG00000013838	PDCD11	97	57.321	Dasypus_novemcinctus
ENSCSEG00000010739	pdcd11	99	42.920	ENSDORG00000010420	Pdcd11	97	42.976	Dipodomys_ordii
ENSCSEG00000010739	pdcd11	74	33.225	FBgn0039182	CG5728	89	33.225	Drosophila_melanogaster
ENSCSEG00000010739	pdcd11	92	53.226	ENSETEG00000000813	PDCD11	97	44.231	Echinops_telfairi
ENSCSEG00000010739	pdcd11	71	49.787	ENSEBUG00000002358	-	88	49.787	Eptatretus_burgeri
ENSCSEG00000010739	pdcd11	96	44.101	ENSEASG00005015159	PDCD11	97	44.177	Equus_asinus_asinus
ENSCSEG00000010739	pdcd11	99	44.026	ENSECAG00000020507	PDCD11	97	43.910	Equus_caballus
ENSCSEG00000010739	pdcd11	89	43.779	ENSEEUG00000009245	PDCD11	89	43.564	Erinaceus_europaeus
ENSCSEG00000010739	pdcd11	99	58.103	ENSELUG00000004211	pdcd11	96	58.046	Esox_lucius
ENSCSEG00000010739	pdcd11	99	43.781	ENSFCAG00000002384	PDCD11	93	56.757	Felis_catus
ENSCSEG00000010739	pdcd11	99	45.117	ENSFALG00000008775	PDCD11	97	45.156	Ficedula_albicollis
ENSCSEG00000010739	pdcd11	99	43.231	ENSFDAG00000009532	PDCD11	97	43.068	Fukomys_damarensis
ENSCSEG00000010739	pdcd11	89	83.071	ENSFHEG00000022997	pdcd11	92	83.071	Fundulus_heteroclitus
ENSCSEG00000010739	pdcd11	93	58.719	ENSGMOG00000004186	pdcd11	90	58.583	Gadus_morhua
ENSCSEG00000010739	pdcd11	79	43.503	ENSGALG00000008265	PDCD11	97	43.503	Gallus_gallus
ENSCSEG00000010739	pdcd11	97	65.458	ENSGAFG00000012806	pdcd11	97	61.765	Gambusia_affinis
ENSCSEG00000010739	pdcd11	99	70.463	ENSGACG00000018233	pdcd11	97	70.296	Gasterosteus_aculeatus
ENSCSEG00000010739	pdcd11	95	47.230	ENSGAGG00000024314	PDCD11	97	47.230	Gopherus_agassizii
ENSCSEG00000010739	pdcd11	99	43.753	ENSGGOG00000011621	PDCD11	97	43.815	Gorilla_gorilla
ENSCSEG00000010739	pdcd11	99	72.506	ENSHBUG00000020226	pdcd11	97	72.506	Haplochromis_burtoni
ENSCSEG00000010739	pdcd11	99	42.849	ENSHGLG00000001462	PDCD11	97	42.834	Heterocephalus_glaber_female
ENSCSEG00000010739	pdcd11	99	42.303	ENSHGLG00100018779	PDCD11	97	42.289	Heterocephalus_glaber_male
ENSCSEG00000010739	pdcd11	99	67.946	ENSHCOG00000016006	pdcd11	97	67.964	Hippocampus_comes
ENSCSEG00000010739	pdcd11	64	52.654	ENSIPUG00000015102	pdcd11	99	54.808	Ictalurus_punctatus
ENSCSEG00000010739	pdcd11	99	43.045	ENSSTOG00000014553	PDCD11	97	43.414	Ictidomys_tridecemlineatus
ENSCSEG00000010739	pdcd11	99	44.145	ENSJJAG00000015523	Pdcd11	97	44.200	Jaculus_jaculus
ENSCSEG00000010739	pdcd11	52	69.608	ENSKMAG00000021182	pdcd11	99	69.608	Kryptolebias_marmoratus
ENSCSEG00000010739	pdcd11	50	69.048	ENSLBEG00000009990	-	99	69.388	Labrus_bergylta
ENSCSEG00000010739	pdcd11	99	54.899	ENSLOCG00000011818	pdcd11	97	54.811	Lepisosteus_oculatus
ENSCSEG00000010739	pdcd11	99	43.965	ENSLAFG00000008398	PDCD11	97	44.027	Loxodonta_africana
ENSCSEG00000010739	pdcd11	99	43.417	ENSMFAG00000044058	PDCD11	97	43.317	Macaca_fascicularis
ENSCSEG00000010739	pdcd11	99	43.362	ENSMMUG00000007058	PDCD11	97	43.262	Macaca_mulatta
ENSCSEG00000010739	pdcd11	99	43.573	ENSMNEG00000040726	PDCD11	97	43.372	Macaca_nemestrina
ENSCSEG00000010739	pdcd11	99	44.020	ENSMLEG00000040978	PDCD11	97	43.909	Mandrillus_leucophaeus
ENSCSEG00000010739	pdcd11	99	75.776	ENSMAMG00000009572	pdcd11	97	76.059	Mastacembelus_armatus
ENSCSEG00000010739	pdcd11	99	72.392	ENSMZEG00005008949	pdcd11	97	72.392	Maylandia_zebra
ENSCSEG00000010739	pdcd11	99	44.584	ENSMGAG00000010482	PDCD11	93	56.024	Meleagris_gallopavo
ENSCSEG00000010739	pdcd11	90	44.949	ENSMAUG00000014924	Pdcd11	93	44.135	Mesocricetus_auratus
ENSCSEG00000010739	pdcd11	99	43.562	ENSMICG00000012421	PDCD11	97	43.342	Microcebus_murinus
ENSCSEG00000010739	pdcd11	99	42.647	ENSMOCG00000021792	Pdcd11	97	42.647	Microtus_ochrogaster
ENSCSEG00000010739	pdcd11	99	62.081	ENSMMOG00000007572	pdcd11	97	71.116	Mola_mola
ENSCSEG00000010739	pdcd11	99	41.662	ENSMODG00000011077	PDCD11	75	39.986	Monodelphis_domestica
ENSCSEG00000010739	pdcd11	99	61.599	ENSMALG00000003859	pdcd11	98	71.895	Monopterus_albus
ENSCSEG00000010739	pdcd11	99	43.397	MGP_CAROLIEiJ_G0023050	Pdcd11	97	43.524	Mus_caroli
ENSCSEG00000010739	pdcd11	99	43.562	ENSMUSG00000025047	Pdcd11	97	43.373	Mus_musculus
ENSCSEG00000010739	pdcd11	99	43.388	MGP_PahariEiJ_G0014540	Pdcd11	97	43.021	Mus_pahari
ENSCSEG00000010739	pdcd11	99	43.500	MGP_SPRETEiJ_G0023971	Pdcd11	97	43.257	Mus_spretus
ENSCSEG00000010739	pdcd11	99	43.972	ENSMPUG00000016829	PDCD11	97	44.208	Mustela_putorius_furo
ENSCSEG00000010739	pdcd11	99	43.601	ENSMLUG00000004997	PDCD11	97	43.604	Myotis_lucifugus
ENSCSEG00000010739	pdcd11	99	43.353	ENSNGAG00000018143	Pdcd11	97	43.332	Nannospalax_galili
ENSCSEG00000010739	pdcd11	87	76.923	ENSNBRG00000021596	pdcd11	95	78.964	Neolamprologus_brichardi
ENSCSEG00000010739	pdcd11	99	42.169	ENSNLEG00000026700	PDCD11	97	42.232	Nomascus_leucogenys
ENSCSEG00000010739	pdcd11	70	65.517	ENSMEUG00000013719	-	59	65.517	Notamacropus_eugenii
ENSCSEG00000010739	pdcd11	98	44.759	ENSOPRG00000010593	PDCD11	95	44.759	Ochotona_princeps
ENSCSEG00000010739	pdcd11	99	42.927	ENSODEG00000008079	PDCD11	97	42.663	Octodon_degus
ENSCSEG00000010739	pdcd11	99	72.676	ENSONIG00000018835	pdcd11	97	72.722	Oreochromis_niloticus
ENSCSEG00000010739	pdcd11	99	42.889	ENSOANG00000001636	-	97	43.086	Ornithorhynchus_anatinus
ENSCSEG00000010739	pdcd11	99	43.059	ENSOCUG00000006312	PDCD11	97	42.943	Oryctolagus_cuniculus
ENSCSEG00000010739	pdcd11	50	68.516	ENSORLG00000012995	pdcd11	96	68.516	Oryzias_latipes
ENSCSEG00000010739	pdcd11	99	70.356	ENSORLG00020003642	pdcd11	97	70.073	Oryzias_latipes_hni
ENSCSEG00000010739	pdcd11	99	70.508	ENSORLG00015001618	pdcd11	97	70.226	Oryzias_latipes_hsok
ENSCSEG00000010739	pdcd11	64	70.423	ENSOMEG00000010904	pdcd11	94	70.070	Oryzias_melastigma
ENSCSEG00000010739	pdcd11	99	43.246	ENSOGAG00000008683	PDCD11	97	42.904	Otolemur_garnettii
ENSCSEG00000010739	pdcd11	99	43.597	ENSOARG00000003719	PDCD11	97	43.177	Ovis_aries
ENSCSEG00000010739	pdcd11	99	43.754	ENSPPAG00000024593	PDCD11	97	43.676	Pan_paniscus
ENSCSEG00000010739	pdcd11	99	43.967	ENSPPRG00000015133	PDCD11	94	55.462	Panthera_pardus
ENSCSEG00000010739	pdcd11	99	43.913	ENSPTIG00000011433	PDCD11	75	42.264	Panthera_tigris_altaica
ENSCSEG00000010739	pdcd11	99	43.815	ENSPTRG00000002911	PDCD11	97	43.753	Pan_troglodytes
ENSCSEG00000010739	pdcd11	99	43.699	ENSPANG00000020959	PDCD11	97	43.706	Papio_anubis
ENSCSEG00000010739	pdcd11	99	53.074	ENSPKIG00000000973	pdcd11	97	52.905	Paramormyrops_kingsleyae
ENSCSEG00000010739	pdcd11	80	44.976	ENSPSIG00000005102	PDCD11	93	45.332	Pelodiscus_sinensis
ENSCSEG00000010739	pdcd11	80	65.375	ENSPMGG00000007289	pdcd11	91	82.692	Periophthalmus_magnuspinnatus
ENSCSEG00000010739	pdcd11	99	43.424	ENSPCIG00000001118	PDCD11	75	42.346	Phascolarctos_cinereus
ENSCSEG00000010739	pdcd11	99	68.782	ENSPFOG00000006012	pdcd11	97	68.686	Poecilia_formosa
ENSCSEG00000010739	pdcd11	99	61.214	ENSPLAG00000014494	pdcd11	98	65.830	Poecilia_latipinna
ENSCSEG00000010739	pdcd11	99	53.966	ENSPMEG00000018177	pdcd11	98	65.755	Poecilia_mexicana
ENSCSEG00000010739	pdcd11	99	68.192	ENSPREG00000000475	pdcd11	97	68.210	Poecilia_reticulata
ENSCSEG00000010739	pdcd11	99	42.784	ENSPPYG00000002621	PDCD11	97	42.522	Pongo_abelii
ENSCSEG00000010739	pdcd11	62	48.203	ENSPCAG00000011663	PDCD11	63	48.203	Procavia_capensis
ENSCSEG00000010739	pdcd11	90	45.042	ENSPCOG00000023327	PDCD11	94	44.872	Propithecus_coquereli
ENSCSEG00000010739	pdcd11	99	43.511	ENSPVAG00000004176	PDCD11	97	43.402	Pteropus_vampyrus
ENSCSEG00000010739	pdcd11	99	72.222	ENSPNYG00000003979	pdcd11	97	72.222	Pundamilia_nyererei
ENSCSEG00000010739	pdcd11	94	55.912	ENSPNAG00000017225	pdcd11	97	55.700	Pygocentrus_nattereri
ENSCSEG00000010739	pdcd11	99	43.308	ENSRNOG00000020304	Pdcd11	97	43.067	Rattus_norvegicus
ENSCSEG00000010739	pdcd11	99	43.471	ENSRBIG00000011889	PDCD11	97	43.426	Rhinopithecus_bieti
ENSCSEG00000010739	pdcd11	99	43.471	ENSRROG00000030483	PDCD11	97	43.426	Rhinopithecus_roxellana
ENSCSEG00000010739	pdcd11	91	31.218	YMR229C	-	95	31.315	Saccharomyces_cerevisiae
ENSCSEG00000010739	pdcd11	99	41.298	ENSSBOG00000030308	PDCD11	97	40.743	Saimiri_boliviensis_boliviensis
ENSCSEG00000010739	pdcd11	99	42.888	ENSSHAG00000018258	PDCD11	97	42.842	Sarcophilus_harrisii
ENSCSEG00000010739	pdcd11	99	54.520	ENSSFOG00015003881	pdcd11	97	54.216	Scleropages_formosus
ENSCSEG00000010739	pdcd11	99	77.432	ENSSMAG00000006612	pdcd11	97	77.036	Scophthalmus_maximus
ENSCSEG00000010739	pdcd11	98	67.678	ENSSDUG00000021302	pdcd11	99	72.429	Seriola_dumerili
ENSCSEG00000010739	pdcd11	51	76.222	ENSSLDG00000010228	pdcd11	98	76.889	Seriola_lalandi_dorsalis
ENSCSEG00000010739	pdcd11	80	40.351	ENSSARG00000002540	PDCD11	67	40.351	Sorex_araneus
ENSCSEG00000010739	pdcd11	99	73.223	ENSSPAG00000017558	pdcd11	99	73.110	Stegastes_partitus
ENSCSEG00000010739	pdcd11	99	43.549	ENSSSCG00000010599	PDCD11	97	43.707	Sus_scrofa
ENSCSEG00000010739	pdcd11	72	68.681	ENSTRUG00000014291	pdcd11	100	68.838	Takifugu_rubripes
ENSCSEG00000010739	pdcd11	99	68.132	ENSTNIG00000012085	pdcd11	97	67.857	Tetraodon_nigroviridis
ENSCSEG00000010739	pdcd11	99	41.338	ENSTBEG00000001893	PDCD11	91	58.904	Tupaia_belangeri
ENSCSEG00000010739	pdcd11	99	40.348	ENSTTRG00000003356	PDCD11	93	51.672	Tursiops_truncatus
ENSCSEG00000010739	pdcd11	99	43.726	ENSUAMG00000018015	PDCD11	94	56.497	Ursus_americanus
ENSCSEG00000010739	pdcd11	99	43.043	ENSUMAG00000023567	PDCD11	94	56.497	Ursus_maritimus
ENSCSEG00000010739	pdcd11	64	53.933	ENSVPAG00000007405	PDCD11	71	53.933	Vicugna_pacos
ENSCSEG00000010739	pdcd11	99	43.808	ENSVVUG00000004457	PDCD11	97	43.849	Vulpes_vulpes
ENSCSEG00000010739	pdcd11	99	44.000	ENSXETG00000009482	pdcd11	97	43.760	Xenopus_tropicalis
ENSCSEG00000010739	pdcd11	96	60.190	ENSXCOG00000012420	pdcd11	97	57.435	Xiphophorus_couchianus
ENSCSEG00000010739	pdcd11	99	69.348	ENSXMAG00000004638	pdcd11	97	69.479	Xiphophorus_maculatus