EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010769 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: si:dkey-89b17.4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 9466 bases
Position: chr17:13450690-13460155
Accession: ZDB-GENE-030131-8215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	1	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	2	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	3	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	4	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	5	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	6	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	7	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	8	9
ENSCSEP00000016736	zf-C2H2	PF00096.26	1.3e-77	9	9
ENSCSEP00000016736	zf-met	PF12874.7	3.3e-12	1	2
ENSCSEP00000016736	zf-met	PF12874.7	3.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000016949	-	4281	-	ENSCSEP00000016736	1426 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000010769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010769	si:dkey-89b17.4	89	47.368	ENSCSEG00000018535	-	87	47.368
ENSCSEG00000010769	si:dkey-89b17.4	89	30.843	ENSCSEG00000020730	-	91	36.508
ENSCSEG00000010769	si:dkey-89b17.4	70	30.222	ENSCSEG00000018829	-	69	30.222
ENSCSEG00000010769	si:dkey-89b17.4	62	35.172	ENSCSEG00000000356	znf648	99	35.172
ENSCSEG00000010769	si:dkey-89b17.4	96	31.880	ENSCSEG00000004273	-	73	32.308
ENSCSEG00000010769	si:dkey-89b17.4	96	37.500	ENSCSEG00000011586	znf236	77	37.500
ENSCSEG00000010769	si:dkey-89b17.4	89	37.143	ENSCSEG00000001748	-	96	32.171
ENSCSEG00000010769	si:dkey-89b17.4	65	35.391	ENSCSEG00000018497	-	50	43.103
ENSCSEG00000010769	si:dkey-89b17.4	93	35.780	ENSCSEG00000008502	-	74	35.780
ENSCSEG00000010769	si:dkey-89b17.4	93	32.000	ENSCSEG00000010423	-	56	42.857
ENSCSEG00000010769	si:dkey-89b17.4	75	30.830	ENSCSEG00000004210	-	98	30.830
ENSCSEG00000010769	si:dkey-89b17.4	89	43.103	ENSCSEG00000008510	-	55	43.103
ENSCSEG00000010769	si:dkey-89b17.4	55	37.838	ENSCSEG00000004265	-	84	37.838
ENSCSEG00000010769	si:dkey-89b17.4	91	33.333	ENSCSEG00000018822	-	100	33.333
ENSCSEG00000010769	si:dkey-89b17.4	73	35.514	ENSCSEG00000019029	-	98	35.514
ENSCSEG00000010769	si:dkey-89b17.4	100	33.601	ENSCSEG00000012389	znf646	100	32.561
ENSCSEG00000010769	si:dkey-89b17.4	68	39.437	ENSCSEG00000003757	-	74	40.000
ENSCSEG00000010769	si:dkey-89b17.4	58	46.341	ENSCSEG00000007055	-	99	32.510
ENSCSEG00000010769	si:dkey-89b17.4	85	32.319	ENSCSEG00000001771	-	60	35.455
ENSCSEG00000010769	si:dkey-89b17.4	97	38.372	ENSCSEG00000020696	-	97	44.578
ENSCSEG00000010769	si:dkey-89b17.4	89	41.772	ENSCSEG00000013398	-	88	41.772
ENSCSEG00000010769	si:dkey-89b17.4	59	44.954	ENSCSEG00000019047	-	84	44.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010769	si:dkey-89b17.4	100	40.025	ENSAPOG00000020151	znf646	100	49.057	Acanthochromis_polyacanthus
ENSCSEG00000010769	si:dkey-89b17.4	98	84.309	ENSAPOG00000018015	si:dkey-89b17.4	98	84.715	Acanthochromis_polyacanthus
ENSCSEG00000010769	si:dkey-89b17.4	99	45.833	ENSACIG00000023049	znf646	99	55.172	Amphilophus_citrinellus
ENSCSEG00000010769	si:dkey-89b17.4	100	86.290	ENSACIG00000001025	si:dkey-89b17.4	100	87.097	Amphilophus_citrinellus
ENSCSEG00000010769	si:dkey-89b17.4	100	38.295	ENSAOCG00000012062	znf646	100	53.968	Amphiprion_ocellaris
ENSCSEG00000010769	si:dkey-89b17.4	98	84.472	ENSAOCG00000018684	si:dkey-89b17.4	98	84.878	Amphiprion_ocellaris
ENSCSEG00000010769	si:dkey-89b17.4	100	53.968	ENSAPEG00000006427	znf646	100	53.968	Amphiprion_percula
ENSCSEG00000010769	si:dkey-89b17.4	100	85.770	ENSAPEG00000007719	si:dkey-89b17.4	100	86.098	Amphiprion_percula
ENSCSEG00000010769	si:dkey-89b17.4	98	83.550	ENSATEG00000016814	si:dkey-89b17.4	98	84.760	Anabas_testudineus
ENSCSEG00000010769	si:dkey-89b17.4	100	38.131	ENSATEG00000015206	znf646	100	41.419	Anabas_testudineus
ENSCSEG00000010769	si:dkey-89b17.4	100	41.008	ENSACLG00000012712	znf646	100	41.273	Astatotilapia_calliptera
ENSCSEG00000010769	si:dkey-89b17.4	98	82.587	ENSACLG00000016017	si:dkey-89b17.4	98	83.320	Astatotilapia_calliptera
ENSCSEG00000010769	si:dkey-89b17.4	100	40.623	ENSAMXG00000035525	znf646	99	40.232	Astyanax_mexicanus
ENSCSEG00000010769	si:dkey-89b17.4	98	65.484	ENSAMXG00000001155	si:dkey-89b17.4	98	64.435	Astyanax_mexicanus
ENSCSEG00000010769	si:dkey-89b17.4	98	80.653	ENSCVAG00000012420	si:dkey-89b17.4	98	80.735	Cyprinodon_variegatus
ENSCSEG00000010769	si:dkey-89b17.4	100	65.623	ENSDARG00000075545	si:dkey-89b17.4	100	65.153	Danio_rerio
ENSCSEG00000010769	si:dkey-89b17.4	100	41.506	ENSDARG00000061424	znf646	100	40.754	Danio_rerio
ENSCSEG00000010769	si:dkey-89b17.4	100	42.484	ENSELUG00000010423	znf646	100	42.750	Esox_lucius
ENSCSEG00000010769	si:dkey-89b17.4	99	68.325	ENSELUG00000015516	si:dkey-89b17.4	98	68.063	Esox_lucius
ENSCSEG00000010769	si:dkey-89b17.4	98	39.109	ENSFHEG00000000561	znf646	99	39.033	Fundulus_heteroclitus
ENSCSEG00000010769	si:dkey-89b17.4	99	81.678	ENSFHEG00000019457	si:dkey-89b17.4	98	81.678	Fundulus_heteroclitus
ENSCSEG00000010769	si:dkey-89b17.4	98	47.802	ENSGMOG00000016554	znf646	99	47.802	Gadus_morhua
ENSCSEG00000010769	si:dkey-89b17.4	76	53.968	ENSGAFG00000016353	-	95	53.968	Gambusia_affinis
ENSCSEG00000010769	si:dkey-89b17.4	99	81.997	ENSGAFG00000000345	si:dkey-89b17.4	98	82.488	Gambusia_affinis
ENSCSEG00000010769	si:dkey-89b17.4	99	60.377	ENSGACG00000008733	znf646	98	60.377	Gasterosteus_aculeatus
ENSCSEG00000010769	si:dkey-89b17.4	99	58.932	ENSGACG00000014714	si:dkey-89b17.4	99	67.723	Gasterosteus_aculeatus
ENSCSEG00000010769	si:dkey-89b17.4	100	41.217	ENSHBUG00000004840	znf646	100	41.210	Haplochromis_burtoni
ENSCSEG00000010769	si:dkey-89b17.4	98	82.669	ENSHBUG00000013093	si:dkey-89b17.4	98	83.401	Haplochromis_burtoni
ENSCSEG00000010769	si:dkey-89b17.4	100	79.842	ENSHCOG00000001901	si:dkey-89b17.4	100	80.237	Hippocampus_comes
ENSCSEG00000010769	si:dkey-89b17.4	99	50.602	ENSHCOG00000014890	znf646	100	50.602	Hippocampus_comes
ENSCSEG00000010769	si:dkey-89b17.4	55	66.917	ENSIPUG00000012830	-	81	66.917	Ictalurus_punctatus
ENSCSEG00000010769	si:dkey-89b17.4	99	65.321	ENSIPUG00000012845	si:dkey-89b17.4	98	64.551	Ictalurus_punctatus
ENSCSEG00000010769	si:dkey-89b17.4	99	42.168	ENSIPUG00000018102	znf646	99	40.163	Ictalurus_punctatus
ENSCSEG00000010769	si:dkey-89b17.4	98	81.648	ENSKMAG00000014037	si:dkey-89b17.4	98	81.714	Kryptolebias_marmoratus
ENSCSEG00000010769	si:dkey-89b17.4	93	57.895	ENSKMAG00000011982	znf646	99	58.491	Kryptolebias_marmoratus
ENSCSEG00000010769	si:dkey-89b17.4	100	41.447	ENSLBEG00000016562	znf646	100	41.228	Labrus_bergylta
ENSCSEG00000010769	si:dkey-89b17.4	98	83.876	ENSLBEG00000020291	si:dkey-89b17.4	98	83.876	Labrus_bergylta
ENSCSEG00000010769	si:dkey-89b17.4	99	38.492	ENSLOCG00000003238	si:dkey-89b17.4	99	39.229	Lepisosteus_oculatus
ENSCSEG00000010769	si:dkey-89b17.4	98	83.821	ENSMAMG00000009604	si:dkey-89b17.4	98	84.797	Mastacembelus_armatus
ENSCSEG00000010769	si:dkey-89b17.4	100	41.992	ENSMAMG00000009313	znf646	91	55.000	Mastacembelus_armatus
ENSCSEG00000010769	si:dkey-89b17.4	98	82.587	ENSMZEG00005003901	si:dkey-89b17.4	98	83.320	Maylandia_zebra
ENSCSEG00000010769	si:dkey-89b17.4	98	54.167	ENSMZEG00005011264	znf646	100	41.058	Maylandia_zebra
ENSCSEG00000010769	si:dkey-89b17.4	99	54.717	ENSMMOG00000002311	znf646	98	54.717	Mola_mola
ENSCSEG00000010769	si:dkey-89b17.4	100	86.801	ENSMMOG00000012741	si:dkey-89b17.4	100	87.407	Mola_mola
ENSCSEG00000010769	si:dkey-89b17.4	100	84.389	ENSMALG00000019558	si:dkey-89b17.4	100	85.108	Monopterus_albus
ENSCSEG00000010769	si:dkey-89b17.4	99	39.118	ENSMALG00000002274	-	99	33.407	Monopterus_albus
ENSCSEG00000010769	si:dkey-89b17.4	100	84.121	ENSNBRG00000020314	si:dkey-89b17.4	100	84.711	Neolamprologus_brichardi
ENSCSEG00000010769	si:dkey-89b17.4	100	41.405	ENSNBRG00000022534	znf646	100	41.661	Neolamprologus_brichardi
ENSCSEG00000010769	si:dkey-89b17.4	99	63.281	ENSONIG00000009324	si:dkey-89b17.4	99	64.179	Oreochromis_niloticus
ENSCSEG00000010769	si:dkey-89b17.4	88	40.135	ENSONIG00000019947	-	100	45.614	Oreochromis_niloticus
ENSCSEG00000010769	si:dkey-89b17.4	100	80.630	ENSORLG00000024255	si:dkey-89b17.4	100	81.406	Oryzias_latipes
ENSCSEG00000010769	si:dkey-89b17.4	100	39.897	ENSORLG00000007885	znf646	100	39.526	Oryzias_latipes
ENSCSEG00000010769	si:dkey-89b17.4	100	39.641	ENSORLG00020010285	znf646	100	39.083	Oryzias_latipes_hni
ENSCSEG00000010769	si:dkey-89b17.4	100	39.653	ENSORLG00015008733	znf646	100	39.318	Oryzias_latipes_hsok
ENSCSEG00000010769	si:dkey-89b17.4	100	80.696	ENSOMEG00000020587	si:dkey-89b17.4	100	81.340	Oryzias_melastigma
ENSCSEG00000010769	si:dkey-89b17.4	100	40.283	ENSOMEG00000015658	znf646	99	39.757	Oryzias_melastigma
ENSCSEG00000010769	si:dkey-89b17.4	96	46.377	ENSPMGG00000004639	znf646	99	35.928	Periophthalmus_magnuspinnatus
ENSCSEG00000010769	si:dkey-89b17.4	97	68.534	ENSPMGG00000015931	-	96	68.482	Periophthalmus_magnuspinnatus
ENSCSEG00000010769	si:dkey-89b17.4	99	37.799	ENSPFOG00000004826	-	99	38.056	Poecilia_formosa
ENSCSEG00000010769	si:dkey-89b17.4	100	84.739	ENSPFOG00000008241	si:dkey-89b17.4	100	85.074	Poecilia_formosa
ENSCSEG00000010769	si:dkey-89b17.4	97	51.667	ENSPLAG00000010454	-	98	51.667	Poecilia_latipinna
ENSCSEG00000010769	si:dkey-89b17.4	99	84.396	ENSPLAG00000011382	si:dkey-89b17.4	98	84.815	Poecilia_latipinna
ENSCSEG00000010769	si:dkey-89b17.4	99	84.480	ENSPMEG00000000141	si:dkey-89b17.4	98	84.899	Poecilia_mexicana
ENSCSEG00000010769	si:dkey-89b17.4	98	32.425	ENSPMEG00000018283	znf646	99	51.667	Poecilia_mexicana
ENSCSEG00000010769	si:dkey-89b17.4	99	82.108	ENSPREG00000012579	si:dkey-89b17.4	98	82.516	Poecilia_reticulata
ENSCSEG00000010769	si:dkey-89b17.4	98	50.000	ENSPREG00000017637	znf646	98	35.799	Poecilia_reticulata
ENSCSEG00000010769	si:dkey-89b17.4	98	82.669	ENSPNYG00000011901	si:dkey-89b17.4	98	83.401	Pundamilia_nyererei
ENSCSEG00000010769	si:dkey-89b17.4	100	41.217	ENSPNYG00000017692	znf646	100	41.210	Pundamilia_nyererei
ENSCSEG00000010769	si:dkey-89b17.4	98	64.984	ENSPNAG00000022072	si:dkey-89b17.4	98	64.432	Pygocentrus_nattereri
ENSCSEG00000010769	si:dkey-89b17.4	100	41.708	ENSPNAG00000000750	znf646	100	39.273	Pygocentrus_nattereri
ENSCSEG00000010769	si:dkey-89b17.4	100	36.985	ENSSFOG00015004737	si:dkey-89b17.4	100	41.542	Scleropages_formosus
ENSCSEG00000010769	si:dkey-89b17.4	100	38.986	ENSSMAG00000012378	znf646	100	55.769	Scophthalmus_maximus
ENSCSEG00000010769	si:dkey-89b17.4	98	85.028	ENSSDUG00000015931	si:dkey-89b17.4	98	85.354	Seriola_dumerili
ENSCSEG00000010769	si:dkey-89b17.4	100	42.342	ENSSDUG00000002675	znf646	100	41.698	Seriola_dumerili
ENSCSEG00000010769	si:dkey-89b17.4	100	41.593	ENSSLDG00000018521	znf646	100	41.698	Seriola_lalandi_dorsalis
ENSCSEG00000010769	si:dkey-89b17.4	98	84.947	ENSSLDG00000012415	si:dkey-89b17.4	98	85.273	Seriola_lalandi_dorsalis
ENSCSEG00000010769	si:dkey-89b17.4	99	84.647	ENSSPAG00000018810	si:dkey-89b17.4	98	84.890	Stegastes_partitus
ENSCSEG00000010769	si:dkey-89b17.4	100	41.540	ENSSPAG00000016701	znf646	100	41.950	Stegastes_partitus
ENSCSEG00000010769	si:dkey-89b17.4	100	50.746	ENSTRUG00000025597	znf646	100	50.746	Takifugu_rubripes
ENSCSEG00000010769	si:dkey-89b17.4	100	83.908	ENSTRUG00000020495	si:dkey-89b17.4	100	84.235	Takifugu_rubripes
ENSCSEG00000010769	si:dkey-89b17.4	99	36.364	ENSTNIG00000000073	znf646	99	42.878	Tetraodon_nigroviridis
ENSCSEG00000010769	si:dkey-89b17.4	98	53.492	ENSTNIG00000001159	si:dkey-89b17.4	99	47.690	Tetraodon_nigroviridis
ENSCSEG00000010769	si:dkey-89b17.4	100	84.667	ENSXCOG00000001645	si:dkey-89b17.4	100	85.138	Xiphophorus_couchianus
ENSCSEG00000010769	si:dkey-89b17.4	96	35.429	ENSXCOG00000002714	-	94	39.130	Xiphophorus_couchianus
ENSCSEG00000010769	si:dkey-89b17.4	96	50.769	ENSXMAG00000018743	-	94	38.587	Xiphophorus_maculatus
ENSCSEG00000010769	si:dkey-89b17.4	100	84.869	ENSXMAG00000024528	si:dkey-89b17.4	100	85.272	Xiphophorus_maculatus