EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010804 (Gene tree)
Gene ID: 103398516
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13852 bases
Position: chrKI934270.1:384744-398595
Accession: 103398516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016812	SAP	PF02037.27	2.3e-11	1	1
ENSCSEP00000016819	SAP	PF02037.27	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017025	-	2028	-	ENSCSEP00000016812	675 (aa)	-	-
ENSCSET00000017032	-	6719	XM_008337165	ENSCSEP00000016819	834 (aa)	XP_008335387	UPI00049631DF

Gene Model

Click here to download ENSCSEG00000010804's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010804	hnrnpub	83	46.060	ENSCSEG00000005657	HNRNPUL1	70	44.737
ENSCSEG00000010804	hnrnpub	83	33.743	ENSCSEG00000005686	si:ch211-107m4.1	90	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010804	hnrnpub	89	64.062	ENSG00000153187	HNRNPU	99	65.217	Homo_sapiens
ENSCSEG00000010804	hnrnpub	100	81.655	ENSAPOG00000017400	hnrnpub	100	76.739	Acanthochromis_polyacanthus
ENSCSEG00000010804	hnrnpub	89	64.062	ENSAMEG00000009145	HNRNPU	80	67.213	Ailuropoda_melanoleuca
ENSCSEG00000010804	hnrnpub	100	77.333	ENSACIG00000012138	hnrnpub	96	79.373	Amphilophus_citrinellus
ENSCSEG00000010804	hnrnpub	100	82.854	ENSAOCG00000015843	hnrnpub	100	77.818	Amphiprion_ocellaris
ENSCSEG00000010804	hnrnpub	100	82.854	ENSAPEG00000014679	hnrnpub	100	77.818	Amphiprion_percula
ENSCSEG00000010804	hnrnpub	98	83.761	ENSATEG00000016178	hnrnpub	82	84.375	Anabas_testudineus
ENSCSEG00000010804	hnrnpub	85	68.750	ENSACAG00000004511	HNRNPU	78	66.667	Anolis_carolinensis
ENSCSEG00000010804	hnrnpub	89	64.062	ENSANAG00000033895	-	94	54.418	Aotus_nancymaae
ENSCSEG00000010804	hnrnpub	100	78.922	ENSACLG00000008165	hnrnpub	100	77.365	Astatotilapia_calliptera
ENSCSEG00000010804	hnrnpub	89	64.062	ENSBTAG00000007606	HNRNPU	80	67.213	Bos_taurus
ENSCSEG00000010804	hnrnpub	89	64.062	ENSCJAG00000016914	HNRNPU	94	53.997	Callithrix_jacchus
ENSCSEG00000010804	hnrnpub	89	64.062	ENSCAFG00020000918	HNRNPU	70	64.062	Canis_lupus_dingo
ENSCSEG00000010804	hnrnpub	89	64.062	ENSCHIG00000004900	HNRNPU	81	64.062	Capra_hircus
ENSCSEG00000010804	hnrnpub	89	65.625	ENSCPOG00000011887	HNRNPU	80	68.852	Cavia_porcellus
ENSCSEG00000010804	hnrnpub	89	64.062	ENSCCAG00000037859	-	94	54.278	Cebus_capucinus
ENSCSEG00000010804	hnrnpub	96	60.746	ENSCATG00000035273	HNRNPU	94	53.997	Cercocebus_atys
ENSCSEG00000010804	hnrnpub	89	65.625	ENSCLAG00000007100	HNRNPU	80	68.852	Chinchilla_lanigera
ENSCSEG00000010804	hnrnpub	96	60.746	ENSCSAG00000009219	HNRNPU	70	64.062	Chlorocebus_sabaeus
ENSCSEG00000010804	hnrnpub	83	80.435	ENSCHOG00000001387	HNRNPU	76	80.435	Choloepus_hoffmanni
ENSCSEG00000010804	hnrnpub	96	61.854	ENSCPBG00000009415	HNRNPU	84	63.388	Chrysemys_picta_bellii
ENSCSEG00000010804	hnrnpub	96	61.802	ENSCANG00000022780	HNRNPU	80	67.213	Colobus_angolensis_palliatus
ENSCSEG00000010804	hnrnpub	98	58.750	ENSCGRG00001020525	Hnrnpu	81	83.721	Cricetulus_griseus_chok1gshd
ENSCSEG00000010804	hnrnpub	99	69.116	ENSCVAG00000004280	hnrnpub	90	79.365	Cyprinodon_variegatus
ENSCSEG00000010804	hnrnpub	100	57.437	ENSDARG00000004735	hnrnpub	83	62.626	Danio_rerio
ENSCSEG00000010804	hnrnpub	98	57.604	ENSDARG00000015206	hnrnpua	85	60.958	Danio_rerio
ENSCSEG00000010804	hnrnpub	98	56.125	ENSDNOG00000000215	HNRNPU	89	77.551	Dasypus_novemcinctus
ENSCSEG00000010804	hnrnpub	86	78.261	ENSDORG00000015491	Hnrnpu	71	65.625	Dipodomys_ordii
ENSCSEG00000010804	hnrnpub	89	64.062	ENSETEG00000014565	HNRNPU	80	67.213	Echinops_telfairi
ENSCSEG00000010804	hnrnpub	90	64.062	ENSEASG00005003017	HNRNPU	75	55.621	Equus_asinus_asinus
ENSCSEG00000010804	hnrnpub	90	64.062	ENSECAG00000007955	HNRNPU	75	55.473	Equus_caballus
ENSCSEG00000010804	hnrnpub	100	69.861	ENSELUG00000010733	hnrnpub	100	68.973	Esox_lucius
ENSCSEG00000010804	hnrnpub	99	59.388	ENSELUG00000011966	hnrnpua	93	55.618	Esox_lucius
ENSCSEG00000010804	hnrnpub	89	62.615	ENSFCAG00000002156	HNRNPU	69	64.062	Felis_catus
ENSCSEG00000010804	hnrnpub	98	58.260	ENSFDAG00000006026	HNRNPU	99	68.852	Fukomys_damarensis
ENSCSEG00000010804	hnrnpub	100	75.882	ENSFHEG00000022639	hnrnpub	100	73.765	Fundulus_heteroclitus
ENSCSEG00000010804	hnrnpub	100	69.312	ENSGMOG00000001755	hnrnpub	99	69.402	Gadus_morhua
ENSCSEG00000010804	hnrnpub	90	62.821	ENSGALG00000010671	HNRNPU	78	62.295	Gallus_gallus
ENSCSEG00000010804	hnrnpub	100	74.074	ENSGAFG00000009369	hnrnpub	100	75.829	Gambusia_affinis
ENSCSEG00000010804	hnrnpub	91	88.000	ENSGACG00000004679	hnrnpub	99	69.283	Gasterosteus_aculeatus
ENSCSEG00000010804	hnrnpub	98	60.139	ENSGGOG00000004061	HNRNPU	94	54.979	Gorilla_gorilla
ENSCSEG00000010804	hnrnpub	100	79.042	ENSHBUG00000012290	hnrnpub	100	77.365	Haplochromis_burtoni
ENSCSEG00000010804	hnrnpub	89	67.188	ENSHGLG00000010594	-	78	70.492	Heterocephalus_glaber_female
ENSCSEG00000010804	hnrnpub	98	57.522	ENSHGLG00100015093	HNRNPU	99	69.355	Heterocephalus_glaber_male
ENSCSEG00000010804	hnrnpub	88	91.892	ENSHCOG00000020091	hnrnpub	100	71.190	Hippocampus_comes
ENSCSEG00000010804	hnrnpub	86	91.489	ENSIPUG00000007749	hnrnpu	94	79.661	Ictalurus_punctatus
ENSCSEG00000010804	hnrnpub	96	62.635	ENSJJAG00000011371	Hnrnpu	79	83.721	Jaculus_jaculus
ENSCSEG00000010804	hnrnpub	100	76.100	ENSKMAG00000004532	hnrnpub	100	74.675	Kryptolebias_marmoratus
ENSCSEG00000010804	hnrnpub	82	86.869	ENSLBEG00000022520	hnrnpub	100	76.896	Labrus_bergylta
ENSCSEG00000010804	hnrnpub	96	54.310	ENSLACG00000017463	HNRNPU	74	70.175	Latimeria_chalumnae
ENSCSEG00000010804	hnrnpub	89	91.489	ENSLOCG00000016652	hnrnpua	99	61.592	Lepisosteus_oculatus
ENSCSEG00000010804	hnrnpub	96	60.924	ENSLAFG00000021377	HNRNPU	80	67.213	Loxodonta_africana
ENSCSEG00000010804	hnrnpub	96	60.746	ENSMFAG00000037308	HNRNPU	94	53.997	Macaca_fascicularis
ENSCSEG00000010804	hnrnpub	96	60.746	ENSMMUG00000021098	HNRNPU	70	64.062	Macaca_mulatta
ENSCSEG00000010804	hnrnpub	96	60.746	ENSMNEG00000043645	HNRNPU	94	53.997	Macaca_nemestrina
ENSCSEG00000010804	hnrnpub	100	82.275	ENSMAMG00000007196	hnrnpub	100	78.683	Mastacembelus_armatus
ENSCSEG00000010804	hnrnpub	100	78.922	ENSMZEG00005003185	hnrnpub	100	77.485	Maylandia_zebra
ENSCSEG00000010804	hnrnpub	94	60.069	ENSMAUG00000008842	Hnrnpu	68	78.261	Mesocricetus_auratus
ENSCSEG00000010804	hnrnpub	97	61.279	ENSMICG00000004616	HNRNPU	80	67.213	Microcebus_murinus
ENSCSEG00000010804	hnrnpub	95	78.261	ENSMOCG00000015623	Hnrnpu	81	83.721	Microtus_ochrogaster
ENSCSEG00000010804	hnrnpub	89	65.625	ENSMODG00000006515	HNRNPU	79	68.852	Monodelphis_domestica
ENSCSEG00000010804	hnrnpub	99	75.399	ENSMALG00000018243	hnrnpub	96	80.824	Monopterus_albus
ENSCSEG00000010804	hnrnpub	86	78.261	MGP_CAROLIEiJ_G0014962	Hnrnpu	70	65.625	Mus_caroli
ENSCSEG00000010804	hnrnpub	86	78.261	ENSMUSG00000039630	Hnrnpu	69	78.261	Mus_musculus
ENSCSEG00000010804	hnrnpub	86	78.261	MGP_PahariEiJ_G0028193	Hnrnpu	83	78.261	Mus_pahari
ENSCSEG00000010804	hnrnpub	86	78.261	MGP_SPRETEiJ_G0015761	Hnrnpu	68	78.261	Mus_spretus
ENSCSEG00000010804	hnrnpub	88	63.934	ENSMLUG00000000475	HNRNPU	83	63.934	Myotis_lucifugus
ENSCSEG00000010804	hnrnpub	86	78.261	ENSNGAG00000019075	Hnrnpu	69	78.261	Nannospalax_galili
ENSCSEG00000010804	hnrnpub	100	79.401	ENSNBRG00000017855	hnrnpub	100	77.365	Neolamprologus_brichardi
ENSCSEG00000010804	hnrnpub	89	65.625	ENSMEUG00000000541	HNRNPU	79	68.852	Notamacropus_eugenii
ENSCSEG00000010804	hnrnpub	100	76.048	ENSONIG00000001260	hnrnpub	88	81.977	Oreochromis_niloticus
ENSCSEG00000010804	hnrnpub	89	64.062	ENSOCUG00000014469	HNRNPU	73	67.213	Oryctolagus_cuniculus
ENSCSEG00000010804	hnrnpub	100	77.844	ENSORLG00000016114	hnrnpub	100	75.718	Oryzias_latipes
ENSCSEG00000010804	hnrnpub	100	75.862	ENSORLG00020005363	hnrnpub	100	75.957	Oryzias_latipes_hni
ENSCSEG00000010804	hnrnpub	100	76.038	ENSORLG00015001190	hnrnpub	100	75.718	Oryzias_latipes_hsok
ENSCSEG00000010804	hnrnpub	82	84.548	ENSOMEG00000014951	hnrnpub	100	76.464	Oryzias_melastigma
ENSCSEG00000010804	hnrnpub	97	61.101	ENSOGAG00000014024	HNRNPU	82	64.062	Otolemur_garnettii
ENSCSEG00000010804	hnrnpub	92	64.062	ENSOARG00000004985	HNRNPU	89	67.213	Ovis_aries
ENSCSEG00000010804	hnrnpub	96	60.924	ENSPPAG00000038652	HNRNPU	94	54.558	Pan_paniscus
ENSCSEG00000010804	hnrnpub	90	64.062	ENSPPRG00000002662	HNRNPU	79	67.213	Panthera_pardus
ENSCSEG00000010804	hnrnpub	96	60.924	ENSPTRG00000002182	HNRNPU	94	54.558	Pan_troglodytes
ENSCSEG00000010804	hnrnpub	96	60.746	ENSPANG00000011643	HNRNPU	94	53.997	Papio_anubis
ENSCSEG00000010804	hnrnpub	100	65.632	ENSPKIG00000006885	hnrnpua	78	85.185	Paramormyrops_kingsleyae
ENSCSEG00000010804	hnrnpub	100	65.599	ENSPKIG00000022332	hnrnpub	82	66.236	Paramormyrops_kingsleyae
ENSCSEG00000010804	hnrnpub	89	65.625	ENSPCIG00000008657	HNRNPU	84	65.625	Phascolarctos_cinereus
ENSCSEG00000010804	hnrnpub	100	74.044	ENSPFOG00000002908	hnrnpub	100	75.474	Poecilia_formosa
ENSCSEG00000010804	hnrnpub	100	77.133	ENSPLAG00000004160	hnrnpub	100	75.118	Poecilia_latipinna
ENSCSEG00000010804	hnrnpub	97	61.101	ENSPCOG00000018655	-	80	67.213	Propithecus_coquereli
ENSCSEG00000010804	hnrnpub	96	59.503	ENSPCOG00000003883	-	73	62.500	Propithecus_coquereli
ENSCSEG00000010804	hnrnpub	88	64.062	ENSPVAG00000002581	HNRNPU	80	67.213	Pteropus_vampyrus
ENSCSEG00000010804	hnrnpub	100	79.162	ENSPNYG00000021642	hnrnpub	100	77.605	Pundamilia_nyererei
ENSCSEG00000010804	hnrnpub	100	63.594	ENSPNAG00000001055	hnrnpub	77	93.617	Pygocentrus_nattereri
ENSCSEG00000010804	hnrnpub	86	78.261	ENSRNOG00000033790	Hnrnpu	69	78.261	Rattus_norvegicus
ENSCSEG00000010804	hnrnpub	96	54.861	ENSRBIG00000031519	HNRNPU	78	57.401	Rhinopithecus_bieti
ENSCSEG00000010804	hnrnpub	98	59.316	ENSRROG00000041642	HNRNPU	76	59.022	Rhinopithecus_roxellana
ENSCSEG00000010804	hnrnpub	100	62.662	ENSSFOG00015019004	hnrnpu	76	91.489	Scleropages_formosus
ENSCSEG00000010804	hnrnpub	100	66.392	ENSSFOG00015001124	hnrnpub	76	91.489	Scleropages_formosus
ENSCSEG00000010804	hnrnpub	82	85.859	ENSSMAG00000003607	hnrnpub	100	79.859	Scophthalmus_maximus
ENSCSEG00000010804	hnrnpub	100	83.134	ENSSDUG00000005912	hnrnpub	100	79.067	Seriola_dumerili
ENSCSEG00000010804	hnrnpub	100	82.837	ENSSLDG00000004899	hnrnpub	100	78.469	Seriola_lalandi_dorsalis
ENSCSEG00000010804	hnrnpub	85	85.000	ENSSPUG00000011393	HNRNPU	79	78.261	Sphenodon_punctatus
ENSCSEG00000010804	hnrnpub	82	88.372	ENSSPAG00000011853	hnrnpub	100	77.126	Stegastes_partitus
ENSCSEG00000010804	hnrnpub	91	61.982	ENSSSCG00000010877	HNRNPU	80	67.213	Sus_scrofa
ENSCSEG00000010804	hnrnpub	100	77.698	ENSTRUG00000007759	hnrnpub	100	76.019	Takifugu_rubripes
ENSCSEG00000010804	hnrnpub	100	70.012	ENSTNIG00000009725	hnrnpub	99	77.635	Tetraodon_nigroviridis
ENSCSEG00000010804	hnrnpub	87	72.549	ENSUAMG00000021120	HNRNPU	80	67.213	Ursus_americanus
ENSCSEG00000010804	hnrnpub	89	62.591	ENSUMAG00000012322	HNRNPU	87	61.290	Ursus_maritimus
ENSCSEG00000010804	hnrnpub	81	64.062	ENSVPAG00000010520	HNRNPU	84	67.213	Vicugna_pacos
ENSCSEG00000010804	hnrnpub	89	64.062	ENSVVUG00000026524	HNRNPU	75	64.062	Vulpes_vulpes
ENSCSEG00000010804	hnrnpub	89	60.158	ENSXETG00000011386	hnrnpu	75	82.222	Xenopus_tropicalis
ENSCSEG00000010804	hnrnpub	100	77.370	ENSXMAG00000010356	hnrnpub	100	76.066	Xiphophorus_maculatus