EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010909 (Gene tree)
Gene ID: 103389920
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8320 bases
Position: chr14:17363297-17371616
Accession: 103389920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000016978	CBFNT	PF08143.11	4.5e-06	1	1
ENSCSEP00000016980	CBFNT	PF08143.11	5.6e-06	1	1
ENSCSEP00000016980	RRM_1	PF00076.22	5.4e-34	1	2
ENSCSEP00000016980	RRM_1	PF00076.22	5.4e-34	2	2
ENSCSEP00000016978	RRM_1	PF00076.22	7.4e-34	1	2
ENSCSEP00000016978	RRM_1	PF00076.22	7.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017193	-	1100	XM_008325555	ENSCSEP00000016980	318 (aa)	XP_016894492	-
ENSCSET00000017191	-	4606	-	ENSCSEP00000016978	355 (aa)	XP_024918397	UPI000D6245E8

Gene Model

Click here to download ENSCSEG00000010909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010909	hnrnpd	65	33.014	ENSCSEG00000005274	tardbpl	52	35.152
ENSCSEG00000010909	hnrnpd	88	57.241	ENSCSEG00000010345	-	98	55.763
ENSCSEG00000010909	hnrnpd	57	34.946	ENSCSEG00000014051	-	72	35.429
ENSCSEG00000010909	hnrnpd	65	39.815	ENSCSEG00000007589	hnrnpa1a	88	37.847
ENSCSEG00000010909	hnrnpd	54	44.134	ENSCSEG00000005613	HNRNPA3	66	42.308
ENSCSEG00000010909	hnrnpd	63	44.068	ENSCSEG00000003266	-	57	47.857
ENSCSEG00000010909	hnrnpd	80	38.554	ENSCSEG00000011032	MSI1	59	42.857
ENSCSEG00000010909	hnrnpd	67	36.735	ENSCSEG00000018162	dazap1	53	38.117
ENSCSEG00000010909	hnrnpd	76	39.683	ENSCSEG00000005834	-	59	42.654
ENSCSEG00000010909	hnrnpd	98	60.383	ENSCSEG00000011636	hnrnpaba	94	60.064
ENSCSEG00000010909	hnrnpd	58	47.518	ENSCSEG00000013549	msi2a	80	47.518
ENSCSEG00000010909	hnrnpd	60	43.750	ENSCSEG00000014344	cirbpa	54	38.983
ENSCSEG00000010909	hnrnpd	53	37.572	ENSCSEG00000003421	hnrnpa0b	64	37.186
ENSCSEG00000010909	hnrnpd	77	40.637	ENSCSEG00000008352	-	63	43.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010909	hnrnpd	88	78.648	ENSG00000138668	HNRNPD	100	90.991	Homo_sapiens
ENSCSEG00000010909	hnrnpd	100	89.655	ENSAPOG00000006184	hnrnpd	100	89.655	Acanthochromis_polyacanthus
ENSCSEG00000010909	hnrnpd	88	73.913	ENSAMEG00000005158	HNRNPD	92	74.916	Ailuropoda_melanoleuca
ENSCSEG00000010909	hnrnpd	81	89.105	ENSACIG00000008353	hnrnpd	83	89.105	Amphilophus_citrinellus
ENSCSEG00000010909	hnrnpd	100	84.953	ENSAOCG00000014191	hnrnpd	100	89.655	Amphiprion_ocellaris
ENSCSEG00000010909	hnrnpd	100	89.342	ENSAPEG00000005603	hnrnpd	100	89.342	Amphiprion_percula
ENSCSEG00000010909	hnrnpd	100	88.715	ENSATEG00000007097	hnrnpd	100	88.715	Anabas_testudineus
ENSCSEG00000010909	hnrnpd	91	76.336	ENSACAG00000010342	HNRNPD	100	77.481	Anolis_carolinensis
ENSCSEG00000010909	hnrnpd	88	78.648	ENSANAG00000035221	HNRNPD	85	78.351	Aotus_nancymaae
ENSCSEG00000010909	hnrnpd	92	87.405	ENSACLG00000026497	hnrnpd	100	93.130	Astatotilapia_calliptera
ENSCSEG00000010909	hnrnpd	100	84.326	ENSACLG00000025213	hnrnpd	100	89.028	Astatotilapia_calliptera
ENSCSEG00000010909	hnrnpd	88	83.986	ENSAMXG00000001477	hnrnpd	96	84.590	Astyanax_mexicanus
ENSCSEG00000010909	hnrnpd	88	74.667	ENSBTAG00000013952	HNRNPD	83	74.916	Bos_taurus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSCJAG00000015165	HNRNPD	85	78.007	Callithrix_jacchus
ENSCSEG00000010909	hnrnpd	88	73.333	ENSCAFG00000025045	HNRNPD	83	74.916	Canis_familiaris
ENSCSEG00000010909	hnrnpd	88	73.333	ENSCAFG00020010713	HNRNPD	83	74.916	Canis_lupus_dingo
ENSCSEG00000010909	hnrnpd	88	78.648	ENSCHIG00000022317	HNRNPD	82	80.000	Capra_hircus
ENSCSEG00000010909	hnrnpd	86	75.362	ENSTSYG00000010395	HNRNPD	100	75.845	Carlito_syrichta
ENSCSEG00000010909	hnrnpd	91	71.591	ENSCPOG00000040484	HNRNPD	77	72.727	Cavia_porcellus
ENSCSEG00000010909	hnrnpd	64	57.635	ENSCCAG00000021563	-	71	63.571	Cebus_capucinus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSCCAG00000024528	HNRNPD	85	78.007	Cebus_capucinus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSCATG00000039829	HNRNPD	85	78.007	Cercocebus_atys
ENSCSEG00000010909	hnrnpd	88	78.929	ENSCLAG00000006540	HNRNPD	92	80.000	Chinchilla_lanigera
ENSCSEG00000010909	hnrnpd	88	73.667	ENSCSAG00000004463	HNRNPD	85	73.226	Chlorocebus_sabaeus
ENSCSEG00000010909	hnrnpd	91	76.923	ENSCHOG00000000045	HNRNPD	98	77.289	Choloepus_hoffmanni
ENSCSEG00000010909	hnrnpd	86	79.636	ENSCPBG00000008025	HNRNPD	85	78.671	Chrysemys_picta_bellii
ENSCSEG00000010909	hnrnpd	88	79.004	ENSCANG00000018501	HNRNPD	85	78.351	Colobus_angolensis_palliatus
ENSCSEG00000010909	hnrnpd	88	79.004	ENSCGRG00001014634	Hnrnpd	82	80.357	Cricetulus_griseus_chok1gshd
ENSCSEG00000010909	hnrnpd	91	76.557	ENSCGRG00000007563	Hnrnpd	96	77.091	Cricetulus_griseus_crigri
ENSCSEG00000010909	hnrnpd	100	86.834	ENSCVAG00000019790	hnrnpd	100	86.834	Cyprinodon_variegatus
ENSCSEG00000010909	hnrnpd	100	77.116	ENSDARG00000059246	hnrnpd	100	81.505	Danio_rerio
ENSCSEG00000010909	hnrnpd	74	65.021	ENSDNOG00000045079	-	80	65.021	Dasypus_novemcinctus
ENSCSEG00000010909	hnrnpd	91	77.289	ENSDNOG00000013830	-	76	77.656	Dasypus_novemcinctus
ENSCSEG00000010909	hnrnpd	55	72.727	ENSDNOG00000041055	-	69	72.727	Dasypus_novemcinctus
ENSCSEG00000010909	hnrnpd	88	78.929	ENSDORG00000012507	Hnrnpd	95	80.000	Dipodomys_ordii
ENSCSEG00000010909	hnrnpd	86	74.490	ENSETEG00000016709	HNRNPD	83	75.585	Echinops_telfairi
ENSCSEG00000010909	hnrnpd	88	78.648	ENSEASG00005016278	HNRNPD	82	80.000	Equus_asinus_asinus
ENSCSEG00000010909	hnrnpd	88	73.333	ENSECAG00000009344	HNRNPD	83	74.916	Equus_caballus
ENSCSEG00000010909	hnrnpd	88	64.667	ENSEEUG00000007552	HNRNPD	83	65.886	Erinaceus_europaeus
ENSCSEG00000010909	hnrnpd	78	77.689	ENSELUG00000003230	hnrnpd	82	79.592	Esox_lucius
ENSCSEG00000010909	hnrnpd	88	79.715	ENSFCAG00000027404	HNRNPD	83	74.916	Felis_catus
ENSCSEG00000010909	hnrnpd	88	78.929	ENSFALG00000005716	HNRNPD	83	80.000	Ficedula_albicollis
ENSCSEG00000010909	hnrnpd	93	70.033	ENSFDAG00000007958	HNRNPD	81	78.022	Fukomys_damarensis
ENSCSEG00000010909	hnrnpd	100	86.207	ENSFHEG00000006838	hnrnpd	100	86.207	Fundulus_heteroclitus
ENSCSEG00000010909	hnrnpd	100	75.000	ENSGMOG00000018481	hnrnpd	100	77.188	Gadus_morhua
ENSCSEG00000010909	hnrnpd	91	80.153	ENSGALG00000011184	HNRNPD	100	80.153	Gallus_gallus
ENSCSEG00000010909	hnrnpd	100	83.851	ENSGAFG00000003714	hnrnpd	100	80.938	Gambusia_affinis
ENSCSEG00000010909	hnrnpd	100	76.780	ENSGACG00000015669	hnrnpd	100	80.495	Gasterosteus_aculeatus
ENSCSEG00000010909	hnrnpd	86	74.830	ENSGAGG00000003656	HNRNPD	88	73.770	Gopherus_agassizii
ENSCSEG00000010909	hnrnpd	91	78.707	ENSGGOG00000026760	HNRNPD	94	79.848	Gorilla_gorilla
ENSCSEG00000010909	hnrnpd	100	84.013	ENSHBUG00000011794	hnrnpd	100	88.715	Haplochromis_burtoni
ENSCSEG00000010909	hnrnpd	88	79.286	ENSHGLG00000004214	HNRNPD	82	80.357	Heterocephalus_glaber_female
ENSCSEG00000010909	hnrnpd	91	81.991	ENSHGLG00100005996	HNRNPD	100	80.153	Heterocephalus_glaber_male
ENSCSEG00000010909	hnrnpd	100	74.845	ENSHCOG00000000087	hnrnpd	98	73.476	Hippocampus_comes
ENSCSEG00000010909	hnrnpd	96	75.896	ENSIPUG00000024954	hnrnpd	97	81.433	Ictalurus_punctatus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSSTOG00000013970	HNRNPD	82	80.000	Ictidomys_tridecemlineatus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSJJAG00000023387	Hnrnpd	93	80.000	Jaculus_jaculus
ENSCSEG00000010909	hnrnpd	100	85.893	ENSKMAG00000004310	hnrnpd	100	85.893	Kryptolebias_marmoratus
ENSCSEG00000010909	hnrnpd	100	83.699	ENSLBEG00000027508	hnrnpd	100	88.088	Labrus_bergylta
ENSCSEG00000010909	hnrnpd	100	71.118	ENSLACG00000005306	HNRNPD	91	77.211	Latimeria_chalumnae
ENSCSEG00000010909	hnrnpd	100	72.414	ENSLOCG00000010743	hnrnpd	100	71.698	Lepisosteus_oculatus
ENSCSEG00000010909	hnrnpd	91	77.289	ENSLAFG00000016483	HNRNPD	98	77.091	Loxodonta_africana
ENSCSEG00000010909	hnrnpd	88	78.648	ENSMFAG00000031674	HNRNPD	85	78.007	Macaca_fascicularis
ENSCSEG00000010909	hnrnpd	88	78.648	ENSMNEG00000028199	HNRNPD	85	78.007	Macaca_nemestrina
ENSCSEG00000010909	hnrnpd	88	78.648	ENSMLEG00000028370	HNRNPD	85	78.007	Mandrillus_leucophaeus
ENSCSEG00000010909	hnrnpd	100	88.088	ENSMAMG00000004971	hnrnpd	100	88.088	Mastacembelus_armatus
ENSCSEG00000010909	hnrnpd	100	84.326	ENSMZEG00005007558	hnrnpd	100	89.028	Maylandia_zebra
ENSCSEG00000010909	hnrnpd	91	80.228	ENSMGAG00000008051	HNRNPD	100	80.228	Meleagris_gallopavo
ENSCSEG00000010909	hnrnpd	88	79.004	ENSMAUG00000008830	Hnrnpd	83	80.357	Mesocricetus_auratus
ENSCSEG00000010909	hnrnpd	86	78.909	ENSMICG00000010984	HNRNPD	91	77.816	Microcebus_murinus
ENSCSEG00000010909	hnrnpd	88	79.004	ENSMOCG00000021398	Hnrnpd	82	80.357	Microtus_ochrogaster
ENSCSEG00000010909	hnrnpd	100	84.013	ENSMMOG00000008627	hnrnpd	100	84.326	Mola_mola
ENSCSEG00000010909	hnrnpd	88	73.422	ENSMODG00000011898	HNRNPD	78	74.667	Monodelphis_domestica
ENSCSEG00000010909	hnrnpd	100	87.774	ENSMALG00000016024	hnrnpd	100	87.774	Monopterus_albus
ENSCSEG00000010909	hnrnpd	88	79.004	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	96.000	Mus_caroli
ENSCSEG00000010909	hnrnpd	88	79.004	ENSMUSG00000000568	Hnrnpd	100	96.000	Mus_musculus
ENSCSEG00000010909	hnrnpd	88	79.004	MGP_PahariEiJ_G0017224	Hnrnpd	100	96.000	Mus_pahari
ENSCSEG00000010909	hnrnpd	88	79.004	MGP_SPRETEiJ_G0028443	Hnrnpd	100	96.000	Mus_spretus
ENSCSEG00000010909	hnrnpd	91	77.289	ENSMPUG00000014782	HNRNPD	98	77.656	Mustela_putorius_furo
ENSCSEG00000010909	hnrnpd	88	67.333	ENSMLUG00000010628	HNRNPD	83	68.896	Myotis_lucifugus
ENSCSEG00000010909	hnrnpd	88	79.004	ENSNGAG00000013451	Hnrnpd	83	80.357	Nannospalax_galili
ENSCSEG00000010909	hnrnpd	100	83.699	ENSNBRG00000019548	hnrnpd	100	88.401	Neolamprologus_brichardi
ENSCSEG00000010909	hnrnpd	87	79.061	ENSNLEG00000008600	HNRNPD	84	80.144	Nomascus_leucogenys
ENSCSEG00000010909	hnrnpd	68	71.856	ENSMEUG00000006804	-	58	72.455	Notamacropus_eugenii
ENSCSEG00000010909	hnrnpd	88	71.572	ENSOPRG00000009336	HNRNPD	82	72.575	Ochotona_princeps
ENSCSEG00000010909	hnrnpd	88	78.929	ENSODEG00000001897	HNRNPD	87	80.000	Octodon_degus
ENSCSEG00000010909	hnrnpd	100	84.326	ENSONIG00000015390	hnrnpd	100	89.028	Oreochromis_niloticus
ENSCSEG00000010909	hnrnpd	91	79.389	ENSOANG00000001932	HNRNPD	100	79.771	Ornithorhynchus_anatinus
ENSCSEG00000010909	hnrnpd	91	77.289	ENSOCUG00000001357	HNRNPD	98	77.091	Oryctolagus_cuniculus
ENSCSEG00000010909	hnrnpd	100	81.818	ENSORLG00000001833	hnrnpd	100	82.759	Oryzias_latipes
ENSCSEG00000010909	hnrnpd	93	83.051	ENSORLG00020014780	hnrnpd	83	84.068	Oryzias_latipes_hni
ENSCSEG00000010909	hnrnpd	100	81.818	ENSORLG00015002382	hnrnpd	100	82.759	Oryzias_latipes_hsok
ENSCSEG00000010909	hnrnpd	100	81.818	ENSOMEG00000018558	hnrnpd	100	85.580	Oryzias_melastigma
ENSCSEG00000010909	hnrnpd	88	73.667	ENSOGAG00000004075	HNRNPD	83	74.916	Otolemur_garnettii
ENSCSEG00000010909	hnrnpd	91	78.733	ENSOARG00000000579	HNRNPD	98	77.656	Ovis_aries
ENSCSEG00000010909	hnrnpd	92	76.976	ENSPPAG00000035750	HNRNPD	100	75.845	Pan_paniscus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSPPRG00000012258	HNRNPD	82	80.000	Panthera_pardus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSPTIG00000019434	HNRNPD	96	80.000	Panthera_tigris_altaica
ENSCSEG00000010909	hnrnpd	88	78.648	ENSPTRG00000016215	HNRNPD	84	78.007	Pan_troglodytes
ENSCSEG00000010909	hnrnpd	88	78.648	ENSPANG00000011785	HNRNPD	85	78.007	Papio_anubis
ENSCSEG00000010909	hnrnpd	100	82.390	ENSPKIG00000025512	hnrnpd	100	81.761	Paramormyrops_kingsleyae
ENSCSEG00000010909	hnrnpd	69	87.864	ENSPSIG00000017029	HNRNPD	79	87.500	Pelodiscus_sinensis
ENSCSEG00000010909	hnrnpd	92	71.959	ENSPMGG00000017169	hnrnpd	85	76.654	Periophthalmus_magnuspinnatus
ENSCSEG00000010909	hnrnpd	91	76.557	ENSPEMG00000014804	Hnrnpd	86	77.091	Peromyscus_maniculatus_bairdii
ENSCSEG00000010909	hnrnpd	88	83.630	ENSPCIG00000003112	HNRNPD	77	80.000	Phascolarctos_cinereus
ENSCSEG00000010909	hnrnpd	100	86.520	ENSPFOG00000002596	hnrnpd	100	86.520	Poecilia_formosa
ENSCSEG00000010909	hnrnpd	100	86.520	ENSPLAG00000004297	hnrnpd	100	86.520	Poecilia_latipinna
ENSCSEG00000010909	hnrnpd	100	86.520	ENSPMEG00000000152	hnrnpd	100	86.520	Poecilia_mexicana
ENSCSEG00000010909	hnrnpd	92	90.114	ENSPREG00000018081	hnrnpd	95	90.114	Poecilia_reticulata
ENSCSEG00000010909	hnrnpd	60	71.654	ENSPPYG00000020411	-	90	67.347	Pongo_abelii
ENSCSEG00000010909	hnrnpd	88	73.667	ENSPPYG00000014885	HNRNPD	85	73.226	Pongo_abelii
ENSCSEG00000010909	hnrnpd	88	72.093	ENSPCAG00000002182	HNRNPD	86	72.026	Procavia_capensis
ENSCSEG00000010909	hnrnpd	88	78.648	ENSPCOG00000021331	HNRNPD	82	80.000	Propithecus_coquereli
ENSCSEG00000010909	hnrnpd	88	72.667	ENSPVAG00000000003	HNRNPD	83	72.241	Pteropus_vampyrus
ENSCSEG00000010909	hnrnpd	100	84.013	ENSPNYG00000004884	hnrnpd	100	89.028	Pundamilia_nyererei
ENSCSEG00000010909	hnrnpd	100	80.189	ENSPNAG00000016368	hnrnpd	97	84.790	Pygocentrus_nattereri
ENSCSEG00000010909	hnrnpd	88	83.571	ENSRNOG00000002292	Hnrnpd	82	79.643	Rattus_norvegicus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSRBIG00000035345	HNRNPD	85	78.007	Rhinopithecus_bieti
ENSCSEG00000010909	hnrnpd	88	78.648	ENSRROG00000011888	HNRNPD	85	78.007	Rhinopithecus_roxellana
ENSCSEG00000010909	hnrnpd	88	78.648	ENSSBOG00000032881	HNRNPD	85	78.007	Saimiri_boliviensis_boliviensis
ENSCSEG00000010909	hnrnpd	91	77.289	ENSSHAG00000013312	HNRNPD	98	77.656	Sarcophilus_harrisii
ENSCSEG00000010909	hnrnpd	100	77.987	ENSSFOG00015005913	hnrnpd	100	82.390	Scleropages_formosus
ENSCSEG00000010909	hnrnpd	100	86.250	ENSSMAG00000009686	hnrnpd	100	87.188	Scophthalmus_maximus
ENSCSEG00000010909	hnrnpd	100	84.013	ENSSDUG00000010792	hnrnpd	100	88.715	Seriola_dumerili
ENSCSEG00000010909	hnrnpd	100	81.250	ENSSLDG00000015962	hnrnpd	100	87.188	Seriola_lalandi_dorsalis
ENSCSEG00000010909	hnrnpd	91	74.359	ENSSARG00000006883	HNRNPD	98	75.824	Sorex_araneus
ENSCSEG00000010909	hnrnpd	91	76.046	ENSSPUG00000013677	HNRNPD	100	77.186	Sphenodon_punctatus
ENSCSEG00000010909	hnrnpd	100	89.655	ENSSPAG00000021014	hnrnpd	100	89.655	Stegastes_partitus
ENSCSEG00000010909	hnrnpd	88	78.648	ENSSSCG00000009249	HNRNPD	85	78.007	Sus_scrofa
ENSCSEG00000010909	hnrnpd	86	73.469	ENSTGUG00000002858	HNRNPD	94	72.756	Taeniopygia_guttata
ENSCSEG00000010909	hnrnpd	100	79.937	ENSTRUG00000018450	hnrnpd	100	83.386	Takifugu_rubripes
ENSCSEG00000010909	hnrnpd	75	80.165	ENSTNIG00000013499	hnrnpd	90	87.615	Tetraodon_nigroviridis
ENSCSEG00000010909	hnrnpd	91	72.527	ENSTBEG00000002327	HNRNPD	98	72.364	Tupaia_belangeri
ENSCSEG00000010909	hnrnpd	88	73.333	ENSTTRG00000007592	HNRNPD	83	74.916	Tursiops_truncatus
ENSCSEG00000010909	hnrnpd	91	78.733	ENSUAMG00000011374	HNRNPD	74	77.656	Ursus_americanus
ENSCSEG00000010909	hnrnpd	91	78.733	ENSUMAG00000008685	HNRNPD	83	77.656	Ursus_maritimus
ENSCSEG00000010909	hnrnpd	91	79.468	ENSVPAG00000004374	HNRNPD	100	79.848	Vicugna_pacos
ENSCSEG00000010909	hnrnpd	88	73.333	ENSVVUG00000024658	HNRNPD	83	74.916	Vulpes_vulpes
ENSCSEG00000010909	hnrnpd	88	75.887	ENSXETG00000012569	hnrnpd	93	75.532	Xenopus_tropicalis
ENSCSEG00000010909	hnrnpd	92	90.076	ENSXCOG00000017639	hnrnpd	100	90.076	Xiphophorus_couchianus
ENSCSEG00000010909	hnrnpd	100	86.250	ENSXMAG00000019151	hnrnpd	100	86.250	Xiphophorus_maculatus