EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010925 (Gene tree)
Gene ID: 103386394
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 22374 bases
Position: chr11:12765680-12788053
Accession: 103386394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017151	R3H	PF01424.22	6.7e-11	1	1
ENSCSEP00000017080	R3H	PF01424.22	8e-11	1	1
ENSCSEP00000017113	R3H	PF01424.22	8.2e-11	1	1
ENSCSEP00000017032	R3H	PF01424.22	8.3e-11	1	1
ENSCSEP00000017051	R3H	PF01424.22	9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017364	-	2496	-	ENSCSEP00000017151	831 (aa)	-	-
ENSCSET00000017326	-	3313	-	ENSCSEP00000017113	982 (aa)	-	-
ENSCSET00000017293	-	6551	XM_008320640	ENSCSEP00000017080	1040 (aa)	XP_008318862	UPI0007DCA05A
ENSCSET00000017264	-	6596	XM_008320636	ENSCSEP00000017051	1055 (aa)	XP_008318858	UPI000497FEFF
ENSCSET00000017245	-	6650	XM_017036785	ENSCSEP00000017032	1073 (aa)	XP_016892274	UPI0007DC9755

Gene Model

Click here to download ENSCSEG00000010925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010925	r3hdm2	81	55.685	ENSCSEG00000008944	r3hdm1	79	59.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010925	r3hdm2	100	67.962	ENSG00000179912	R3HDM2	88	79.592	Homo_sapiens
ENSCSEG00000010925	r3hdm2	60	37.156	ENSAPOG00000021873	-	70	40.192	Acanthochromis_polyacanthus
ENSCSEG00000010925	r3hdm2	100	91.797	ENSAPOG00000020341	r3hdm2	100	92.258	Acanthochromis_polyacanthus
ENSCSEG00000010925	r3hdm2	96	66.667	ENSAMEG00000004812	R3HDM2	97	65.881	Ailuropoda_melanoleuca
ENSCSEG00000010925	r3hdm2	100	92.124	ENSACIG00000016146	r3hdm2	91	92.124	Amphilophus_citrinellus
ENSCSEG00000010925	r3hdm2	100	91.613	ENSAOCG00000023694	r3hdm2	100	92.074	Amphiprion_ocellaris
ENSCSEG00000010925	r3hdm2	100	91.471	ENSAPEG00000008851	r3hdm2	100	91.940	Amphiprion_percula
ENSCSEG00000010925	r3hdm2	100	89.667	ENSATEG00000025024	r3hdm2	100	88.923	Anabas_testudineus
ENSCSEG00000010925	r3hdm2	100	64.120	ENSACAG00000006388	R3HDM2	95	61.845	Anolis_carolinensis
ENSCSEG00000010925	r3hdm2	100	67.689	ENSANAG00000025397	-	96	65.711	Aotus_nancymaae
ENSCSEG00000010925	r3hdm2	100	62.587	ENSANAG00000031310	-	98	60.836	Aotus_nancymaae
ENSCSEG00000010925	r3hdm2	99	93.107	ENSACLG00000019106	r3hdm2	100	91.737	Astatotilapia_calliptera
ENSCSEG00000010925	r3hdm2	100	69.108	ENSAMXG00000017180	r3hdm2	99	70.641	Astyanax_mexicanus
ENSCSEG00000010925	r3hdm2	100	65.301	ENSBTAG00000018361	R3HDM2	96	65.153	Bos_taurus
ENSCSEG00000010925	r3hdm2	100	67.925	ENSCJAG00000007365	R3HDM2	96	65.909	Callithrix_jacchus
ENSCSEG00000010925	r3hdm2	100	64.932	ENSCAFG00000000215	R3HDM2	96	65.192	Canis_familiaris
ENSCSEG00000010925	r3hdm2	100	67.769	ENSCAFG00020023713	R3HDM2	96	67.080	Canis_lupus_dingo
ENSCSEG00000010925	r3hdm2	100	66.090	ENSCHIG00000014022	R3HDM2	96	67.086	Capra_hircus
ENSCSEG00000010925	r3hdm2	100	66.431	ENSTSYG00000001449	R3HDM2	96	65.711	Carlito_syrichta
ENSCSEG00000010925	r3hdm2	100	65.682	ENSCPOG00000009217	R3HDM2	99	65.530	Cavia_porcellus
ENSCSEG00000010925	r3hdm2	90	65.628	ENSCCAG00000026083	R3HDM2	95	66.215	Cebus_capucinus
ENSCSEG00000010925	r3hdm2	100	67.727	ENSCATG00000036929	R3HDM2	96	66.667	Cercocebus_atys
ENSCSEG00000010925	r3hdm2	100	65.006	ENSCLAG00000011997	R3HDM2	99	65.349	Chinchilla_lanigera
ENSCSEG00000010925	r3hdm2	95	68.249	ENSCSAG00000004911	R3HDM2	96	66.764	Chlorocebus_sabaeus
ENSCSEG00000010925	r3hdm2	75	65.948	ENSCHOG00000005636	R3HDM2	86	69.828	Choloepus_hoffmanni
ENSCSEG00000010925	r3hdm2	100	63.250	ENSCPBG00000013922	R3HDM2	96	65.108	Chrysemys_picta_bellii
ENSCSEG00000010925	r3hdm2	100	67.689	ENSCANG00000043807	R3HDM2	96	66.764	Colobus_angolensis_palliatus
ENSCSEG00000010925	r3hdm2	100	63.523	ENSCGRG00001017324	R3hdm2	97	63.011	Cricetulus_griseus_chok1gshd
ENSCSEG00000010925	r3hdm2	100	63.940	ENSCGRG00000003862	R3hdm2	97	63.011	Cricetulus_griseus_crigri
ENSCSEG00000010925	r3hdm2	99	89.106	ENSCVAG00000009058	r3hdm2	100	88.126	Cyprinodon_variegatus
ENSCSEG00000010925	r3hdm2	100	69.170	ENSDARG00000102610	r3hdm2	99	72.178	Danio_rerio
ENSCSEG00000010925	r3hdm2	100	64.004	ENSDNOG00000015033	R3HDM2	100	65.940	Dasypus_novemcinctus
ENSCSEG00000010925	r3hdm2	100	65.087	ENSDORG00000011462	R3hdm2	99	63.836	Dipodomys_ordii
ENSCSEG00000010925	r3hdm2	100	65.158	ENSEASG00005007091	R3HDM2	99	65.470	Equus_asinus_asinus
ENSCSEG00000010925	r3hdm2	100	65.301	ENSECAG00000003157	R3HDM2	96	67.431	Equus_caballus
ENSCSEG00000010925	r3hdm2	100	79.338	ENSELUG00000015969	r3hdm2	100	78.891	Esox_lucius
ENSCSEG00000010925	r3hdm2	100	67.412	ENSFCAG00000000192	R3HDM2	95	66.148	Felis_catus
ENSCSEG00000010925	r3hdm2	87	62.854	ENSFALG00000000255	R3HDM2	96	61.873	Ficedula_albicollis
ENSCSEG00000010925	r3hdm2	100	64.407	ENSFDAG00000019385	R3HDM2	99	64.825	Fukomys_damarensis
ENSCSEG00000010925	r3hdm2	100	88.961	ENSFHEG00000016484	r3hdm2	100	89.054	Fundulus_heteroclitus
ENSCSEG00000010925	r3hdm2	55	37.005	ENSFHEG00000007936	-	67	40.385	Fundulus_heteroclitus
ENSCSEG00000010925	r3hdm2	95	81.402	ENSGMOG00000007961	r3hdm2	100	81.889	Gadus_morhua
ENSCSEG00000010925	r3hdm2	98	71.622	ENSGALG00000043736	R3HDM2	99	63.904	Gallus_gallus
ENSCSEG00000010925	r3hdm2	100	89.694	ENSGAFG00000013887	r3hdm2	100	89.694	Gambusia_affinis
ENSCSEG00000010925	r3hdm2	95	89.679	ENSGACG00000006442	r3hdm2	100	89.883	Gasterosteus_aculeatus
ENSCSEG00000010925	r3hdm2	100	63.204	ENSGAGG00000017797	R3HDM2	96	64.066	Gopherus_agassizii
ENSCSEG00000010925	r3hdm2	100	67.727	ENSGGOG00000015007	R3HDM2	96	66.667	Gorilla_gorilla
ENSCSEG00000010925	r3hdm2	99	62.057	ENSHGLG00000010421	-	97	59.703	Heterocephalus_glaber_female
ENSCSEG00000010925	r3hdm2	100	65.092	ENSHGLG00000010434	-	97	66.040	Heterocephalus_glaber_female
ENSCSEG00000010925	r3hdm2	97	59.976	ENSHGLG00100018871	-	98	57.328	Heterocephalus_glaber_male
ENSCSEG00000010925	r3hdm2	100	64.626	ENSHGLG00100004183	-	97	65.945	Heterocephalus_glaber_male
ENSCSEG00000010925	r3hdm2	100	86.673	ENSHCOG00000001142	r3hdm2	97	87.807	Hippocampus_comes
ENSCSEG00000010925	r3hdm2	100	74.084	ENSIPUG00000023873	r3hdm2	100	74.840	Ictalurus_punctatus
ENSCSEG00000010925	r3hdm2	100	64.583	ENSSTOG00000013424	R3HDM2	96	60.585	Ictidomys_tridecemlineatus
ENSCSEG00000010925	r3hdm2	100	65.581	ENSJJAG00000010001	R3hdm2	96	66.284	Jaculus_jaculus
ENSCSEG00000010925	r3hdm2	99	92.173	ENSKMAG00000012695	r3hdm2	97	90.825	Kryptolebias_marmoratus
ENSCSEG00000010925	r3hdm2	54	39.576	ENSLBEG00000002779	-	77	41.131	Labrus_bergylta
ENSCSEG00000010925	r3hdm2	99	92.887	ENSLBEG00000013115	r3hdm2	96	91.837	Labrus_bergylta
ENSCSEG00000010925	r3hdm2	95	66.023	ENSLACG00000019064	r3hdm2	100	64.638	Latimeria_chalumnae
ENSCSEG00000010925	r3hdm2	100	75.028	ENSLOCG00000005976	r3hdm2	99	73.022	Lepisosteus_oculatus
ENSCSEG00000010925	r3hdm2	99	65.680	ENSLAFG00000006510	R3HDM2	96	67.083	Loxodonta_africana
ENSCSEG00000010925	r3hdm2	100	67.765	ENSMFAG00000036385	R3HDM2	96	66.796	Macaca_fascicularis
ENSCSEG00000010925	r3hdm2	100	67.765	ENSMMUG00000021789	R3HDM2	96	67.335	Macaca_mulatta
ENSCSEG00000010925	r3hdm2	100	67.644	ENSMNEG00000025314	R3HDM2	96	66.441	Macaca_nemestrina
ENSCSEG00000010925	r3hdm2	100	67.845	ENSMLEG00000028915	R3HDM2	96	66.764	Mandrillus_leucophaeus
ENSCSEG00000010925	r3hdm2	99	93.313	ENSMAMG00000009793	r3hdm2	100	92.329	Mastacembelus_armatus
ENSCSEG00000010925	r3hdm2	99	92.490	ENSMZEG00005007319	r3hdm2	100	91.320	Maylandia_zebra
ENSCSEG00000010925	r3hdm2	100	67.175	ENSMICG00000012389	R3HDM2	96	64.440	Microcebus_murinus
ENSCSEG00000010925	r3hdm2	99	65.451	ENSMOCG00000014425	R3hdm2	99	62.886	Microtus_ochrogaster
ENSCSEG00000010925	r3hdm2	100	85.731	ENSMMOG00000007448	r3hdm2	99	85.066	Mola_mola
ENSCSEG00000010925	r3hdm2	100	64.442	MGP_CAROLIEiJ_G0015896	R3hdm2	96	65.213	Mus_caroli
ENSCSEG00000010925	r3hdm2	100	64.747	ENSMUSG00000025404	R3hdm2	96	65.805	Mus_musculus
ENSCSEG00000010925	r3hdm2	100	64.050	MGP_PahariEiJ_G0031189	R3hdm2	96	66.027	Mus_pahari
ENSCSEG00000010925	r3hdm2	100	64.713	MGP_SPRETEiJ_G0016722	R3hdm2	96	65.679	Mus_spretus
ENSCSEG00000010925	r3hdm2	95	66.008	ENSMPUG00000001818	R3HDM2	96	64.312	Mustela_putorius_furo
ENSCSEG00000010925	r3hdm2	95	67.148	ENSMLUG00000004980	R3HDM2	99	65.189	Myotis_lucifugus
ENSCSEG00000010925	r3hdm2	100	64.846	ENSNGAG00000018800	R3hdm2	96	66.603	Nannospalax_galili
ENSCSEG00000010925	r3hdm2	100	91.527	ENSNBRG00000004483	r3hdm2	100	84.146	Neolamprologus_brichardi
ENSCSEG00000010925	r3hdm2	100	67.689	ENSNLEG00000017351	R3HDM2	96	66.764	Nomascus_leucogenys
ENSCSEG00000010925	r3hdm2	99	56.233	ENSMEUG00000008588	R3HDM2	96	57.116	Notamacropus_eugenii
ENSCSEG00000010925	r3hdm2	100	61.547	ENSOPRG00000013670	R3HDM2	96	59.743	Ochotona_princeps
ENSCSEG00000010925	r3hdm2	100	88.314	ENSONIG00000005075	r3hdm2	100	87.835	Oreochromis_niloticus
ENSCSEG00000010925	r3hdm2	96	66.603	ENSOCUG00000013258	R3HDM2	96	66.572	Oryctolagus_cuniculus
ENSCSEG00000010925	r3hdm2	100	88.848	ENSORLG00000005502	r3hdm2	100	89.219	Oryzias_latipes
ENSCSEG00000010925	r3hdm2	99	90.432	ENSORLG00020017069	r3hdm2	100	89.319	Oryzias_latipes_hni
ENSCSEG00000010925	r3hdm2	99	90.535	ENSORLG00015012735	r3hdm2	100	89.414	Oryzias_latipes_hsok
ENSCSEG00000010925	r3hdm2	100	84.859	ENSOMEG00000018079	r3hdm2	99	81.016	Oryzias_melastigma
ENSCSEG00000010925	r3hdm2	100	62.198	ENSOGAG00000012055	R3HDM2	96	63.857	Otolemur_garnettii
ENSCSEG00000010925	r3hdm2	99	57.187	ENSOGAG00000027966	-	93	57.407	Otolemur_garnettii
ENSCSEG00000010925	r3hdm2	100	65.646	ENSOARG00000006929	R3HDM2	96	65.354	Ovis_aries
ENSCSEG00000010925	r3hdm2	100	67.962	ENSPPAG00000034395	R3HDM2	96	66.860	Pan_paniscus
ENSCSEG00000010925	r3hdm2	100	67.412	ENSPPRG00000009240	R3HDM2	96	64.377	Panthera_pardus
ENSCSEG00000010925	r3hdm2	100	67.412	ENSPTIG00000008752	R3HDM2	96	64.377	Panthera_tigris_altaica
ENSCSEG00000010925	r3hdm2	100	67.882	ENSPTRG00000046457	R3HDM2	96	66.893	Pan_troglodytes
ENSCSEG00000010925	r3hdm2	100	67.845	ENSPANG00000024002	R3HDM2	98	64.892	Papio_anubis
ENSCSEG00000010925	r3hdm2	100	79.929	ENSPKIG00000003171	r3hdm2	100	79.531	Paramormyrops_kingsleyae
ENSCSEG00000010925	r3hdm2	65	55.235	ENSPSIG00000006954	R3HDM2	93	56.113	Pelodiscus_sinensis
ENSCSEG00000010925	r3hdm2	100	86.445	ENSPMGG00000007061	r3hdm2	99	82.992	Periophthalmus_magnuspinnatus
ENSCSEG00000010925	r3hdm2	100	63.523	ENSPEMG00000015964	R3hdm2	96	65.646	Peromyscus_maniculatus_bairdii
ENSCSEG00000010925	r3hdm2	100	66.197	ENSPCIG00000023841	R3HDM2	100	61.078	Phascolarctos_cinereus
ENSCSEG00000010925	r3hdm2	94	93.220	ENSPFOG00000006077	r3hdm2	92	93.220	Poecilia_formosa
ENSCSEG00000010925	r3hdm2	99	90.647	ENSPLAG00000002971	r3hdm2	100	89.717	Poecilia_latipinna
ENSCSEG00000010925	r3hdm2	99	90.647	ENSPMEG00000005330	r3hdm2	100	89.717	Poecilia_mexicana
ENSCSEG00000010925	r3hdm2	100	89.425	ENSPREG00000008424	r3hdm2	100	89.610	Poecilia_reticulata
ENSCSEG00000010925	r3hdm2	97	62.722	ENSPPYG00000004685	R3HDM2	77	61.616	Pongo_abelii
ENSCSEG00000010925	r3hdm2	88	78.445	ENSPCAG00000014642	R3HDM2	92	79.152	Procavia_capensis
ENSCSEG00000010925	r3hdm2	100	67.373	ENSPCOG00000013201	R3HDM2	96	65.483	Propithecus_coquereli
ENSCSEG00000010925	r3hdm2	95	67.213	ENSPVAG00000003967	R3HDM2	97	66.193	Pteropus_vampyrus
ENSCSEG00000010925	r3hdm2	100	81.465	ENSPNYG00000013479	r3hdm2	100	83.283	Pundamilia_nyererei
ENSCSEG00000010925	r3hdm2	100	73.850	ENSPNAG00000017473	r3hdm2	100	75.815	Pygocentrus_nattereri
ENSCSEG00000010925	r3hdm2	100	63.729	ENSRNOG00000007801	R3hdm2	96	65.359	Rattus_norvegicus
ENSCSEG00000010925	r3hdm2	100	63.763	ENSRBIG00000037403	R3HDM2	96	63.142	Rhinopithecus_bieti
ENSCSEG00000010925	r3hdm2	100	67.689	ENSRROG00000022271	R3HDM2	96	66.764	Rhinopithecus_roxellana
ENSCSEG00000010925	r3hdm2	100	67.925	ENSSBOG00000023547	R3HDM2	96	65.415	Saimiri_boliviensis_boliviensis
ENSCSEG00000010925	r3hdm2	99	62.891	ENSSHAG00000003511	R3HDM2	95	64.719	Sarcophilus_harrisii
ENSCSEG00000010925	r3hdm2	100	75.548	ENSSFOG00015011219	r3hdm2	99	76.683	Scleropages_formosus
ENSCSEG00000010925	r3hdm2	99	93.808	ENSSMAG00000012073	r3hdm2	100	92.930	Scophthalmus_maximus
ENSCSEG00000010925	r3hdm2	100	92.781	ENSSDUG00000019269	r3hdm2	100	92.777	Seriola_dumerili
ENSCSEG00000010925	r3hdm2	100	93.602	ENSSLDG00000005252	r3hdm2	100	92.606	Seriola_lalandi_dorsalis
ENSCSEG00000010925	r3hdm2	89	62.039	ENSSARG00000003958	R3HDM2	90	59.520	Sorex_araneus
ENSCSEG00000010925	r3hdm2	100	61.538	ENSSPUG00000014132	R3HDM2	99	59.963	Sphenodon_punctatus
ENSCSEG00000010925	r3hdm2	100	91.071	ENSSPAG00000022594	r3hdm2	100	92.409	Stegastes_partitus
ENSCSEG00000010925	r3hdm2	100	68.042	ENSSSCG00000026498	R3HDM2	100	66.920	Sus_scrofa
ENSCSEG00000010925	r3hdm2	77	61.820	ENSTGUG00000015881	R3HDM2	94	64.171	Taeniopygia_guttata
ENSCSEG00000010925	r3hdm2	100	88.679	ENSTRUG00000015075	r3hdm2	99	82.762	Takifugu_rubripes
ENSCSEG00000010925	r3hdm2	92	92.954	ENSTNIG00000007057	r3hdm2	91	92.954	Tetraodon_nigroviridis
ENSCSEG00000010925	r3hdm2	77	70.673	ENSTBEG00000015967	R3HDM2	76	65.878	Tupaia_belangeri
ENSCSEG00000010925	r3hdm2	86	71.905	ENSTTRG00000013082	R3HDM2	85	74.312	Tursiops_truncatus
ENSCSEG00000010925	r3hdm2	100	65.455	ENSUAMG00000020913	R3HDM2	96	66.058	Ursus_americanus
ENSCSEG00000010925	r3hdm2	100	67.136	ENSUMAG00000019179	R3HDM2	99	63.664	Ursus_maritimus
ENSCSEG00000010925	r3hdm2	90	78.827	ENSVPAG00000008656	R3HDM2	89	79.392	Vicugna_pacos
ENSCSEG00000010925	r3hdm2	94	68.415	ENSVVUG00000018014	R3HDM2	92	66.407	Vulpes_vulpes
ENSCSEG00000010925	r3hdm2	100	60.795	ENSXETG00000017153	r3hdm2	96	61.275	Xenopus_tropicalis
ENSCSEG00000010925	r3hdm2	100	88.993	ENSXCOG00000013882	r3hdm2	100	89.227	Xiphophorus_couchianus
ENSCSEG00000010925	r3hdm2	99	90.442	ENSXMAG00000017978	r3hdm2	100	89.610	Xiphophorus_maculatus