EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000010939 (Gene tree)
Gene ID: 103390988
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8839 bases
Position: chr15:10905336-10914174
Accession: 103390988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017033	Exo_endo_phos	PF03372.23	4.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017246	-	4236	XM_008327088	ENSCSEP00000017033	559 (aa)	XP_008325310	UPI000496B45E

Gene Model

Click here to download ENSCSEG00000010939's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000010939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000010939	cnot6b	100	71.301	ENSCSEG00000014001	cnot6l	100	71.301
ENSCSEG00000010939	cnot6b	76	72.000	ENSCSEG00000010395	-	98	72.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000010939	cnot6b	100	85.868	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSCSEG00000010939	cnot6b	100	97.853	ENSAPOG00000009994	cnot6b	100	97.853	Acanthochromis_polyacanthus
ENSCSEG00000010939	cnot6b	100	85.918	ENSAMEG00000000949	CNOT6	99	85.918	Ailuropoda_melanoleuca
ENSCSEG00000010939	cnot6b	100	96.064	ENSACIG00000016566	cnot6b	100	96.064	Amphilophus_citrinellus
ENSCSEG00000010939	cnot6b	100	97.853	ENSAOCG00000006893	cnot6b	100	97.853	Amphiprion_ocellaris
ENSCSEG00000010939	cnot6b	100	97.853	ENSAPEG00000016949	cnot6b	100	97.853	Amphiprion_percula
ENSCSEG00000010939	cnot6b	100	95.349	ENSATEG00000007862	cnot6b	100	95.349	Anabas_testudineus
ENSCSEG00000010939	cnot6b	100	86.583	ENSAPLG00000012715	CNOT6	99	86.941	Anas_platyrhynchos
ENSCSEG00000010939	cnot6b	100	86.225	ENSACAG00000016548	CNOT6	100	86.225	Anolis_carolinensis
ENSCSEG00000010939	cnot6b	100	85.868	ENSANAG00000030436	CNOT6	96	85.868	Aotus_nancymaae
ENSCSEG00000010939	cnot6b	100	96.959	ENSACLG00000008279	cnot6b	100	96.959	Astatotilapia_calliptera
ENSCSEG00000010939	cnot6b	100	90.698	ENSAMXG00000019140	cnot6a	100	90.698	Astyanax_mexicanus
ENSCSEG00000010939	cnot6b	100	88.909	ENSAMXG00000034694	cnot6b	100	88.909	Astyanax_mexicanus
ENSCSEG00000010939	cnot6b	100	86.225	ENSBTAG00000017362	CNOT6	100	86.225	Bos_taurus
ENSCSEG00000010939	cnot6b	100	85.689	ENSCJAG00000009795	CNOT6	100	85.689	Callithrix_jacchus
ENSCSEG00000010939	cnot6b	100	86.225	ENSCAFG00000000464	CNOT6	100	86.225	Canis_familiaris
ENSCSEG00000010939	cnot6b	100	86.225	ENSCAFG00020002441	CNOT6	100	86.225	Canis_lupus_dingo
ENSCSEG00000010939	cnot6b	100	85.868	ENSCHIG00000019100	CNOT6	100	85.868	Capra_hircus
ENSCSEG00000010939	cnot6b	100	84.615	ENSTSYG00000003982	CNOT6	100	84.615	Carlito_syrichta
ENSCSEG00000010939	cnot6b	100	81.216	ENSCPOG00000035657	CNOT6	100	81.216	Cavia_porcellus
ENSCSEG00000010939	cnot6b	100	81.395	ENSCCAG00000033670	CNOT6	100	81.395	Cebus_capucinus
ENSCSEG00000010939	cnot6b	100	85.868	ENSCATG00000042014	CNOT6	100	85.868	Cercocebus_atys
ENSCSEG00000010939	cnot6b	100	84.794	ENSCLAG00000010489	CNOT6	100	84.794	Chinchilla_lanigera
ENSCSEG00000010939	cnot6b	100	85.868	ENSCSAG00000008165	CNOT6	100	85.868	Chlorocebus_sabaeus
ENSCSEG00000010939	cnot6b	100	85.510	ENSCHOG00000009680	CNOT6	100	85.868	Choloepus_hoffmanni
ENSCSEG00000010939	cnot6b	100	86.762	ENSCPBG00000008908	CNOT6	100	87.120	Chrysemys_picta_bellii
ENSCSEG00000010939	cnot6b	100	86.047	ENSCANG00000026756	CNOT6	100	86.047	Colobus_angolensis_palliatus
ENSCSEG00000010939	cnot6b	100	84.615	ENSCGRG00001011452	Cnot6	100	84.615	Cricetulus_griseus_chok1gshd
ENSCSEG00000010939	cnot6b	100	82.469	ENSCGRG00000010407	Cnot6	100	82.469	Cricetulus_griseus_crigri
ENSCSEG00000010939	cnot6b	100	94.991	ENSCVAG00000010538	cnot6b	100	94.991	Cyprinodon_variegatus
ENSCSEG00000010939	cnot6b	100	87.478	ENSDARG00000101072	cnot6b	100	87.478	Danio_rerio
ENSCSEG00000010939	cnot6b	100	90.161	ENSDARG00000008255	cnot6a	100	90.161	Danio_rerio
ENSCSEG00000010939	cnot6b	100	86.404	ENSDNOG00000041644	CNOT6	100	86.404	Dasypus_novemcinctus
ENSCSEG00000010939	cnot6b	100	77.281	ENSDORG00000001708	Cnot6	100	77.281	Dipodomys_ordii
ENSCSEG00000010939	cnot6b	100	68.750	ENSETEG00000006975	CNOT6	100	68.750	Echinops_telfairi
ENSCSEG00000010939	cnot6b	100	86.047	ENSEASG00005012794	-	100	86.047	Equus_asinus_asinus
ENSCSEG00000010939	cnot6b	90	81.076	ENSEASG00005012957	-	99	81.076	Equus_asinus_asinus
ENSCSEG00000010939	cnot6b	100	86.583	ENSECAG00000019325	CNOT6	100	86.583	Equus_caballus
ENSCSEG00000010939	cnot6b	100	81.395	ENSECAG00000012704	-	99	81.395	Equus_caballus
ENSCSEG00000010939	cnot6b	100	85.152	ENSEEUG00000015382	CNOT6	100	85.152	Erinaceus_europaeus
ENSCSEG00000010939	cnot6b	100	87.299	ENSELUG00000024580	cnot6a	100	87.299	Esox_lucius
ENSCSEG00000010939	cnot6b	100	88.536	ENSELUG00000015981	cnot6b	99	88.536	Esox_lucius
ENSCSEG00000010939	cnot6b	100	86.404	ENSFCAG00000001881	CNOT6	100	86.404	Felis_catus
ENSCSEG00000010939	cnot6b	100	86.762	ENSFALG00000007699	CNOT6	100	87.120	Ficedula_albicollis
ENSCSEG00000010939	cnot6b	100	84.258	ENSFDAG00000001999	CNOT6	100	84.258	Fukomys_damarensis
ENSCSEG00000010939	cnot6b	68	93.750	ENSFHEG00000013756	cnot6b	99	93.750	Fundulus_heteroclitus
ENSCSEG00000010939	cnot6b	95	93.951	ENSGMOG00000009767	cnot6b	99	93.951	Gadus_morhua
ENSCSEG00000010939	cnot6b	100	86.583	ENSGALG00000034316	CNOT6	100	86.941	Gallus_gallus
ENSCSEG00000010939	cnot6b	100	95.349	ENSGAFG00000008525	cnot6b	100	95.349	Gambusia_affinis
ENSCSEG00000010939	cnot6b	95	93.006	ENSGACG00000018046	cnot6b	99	93.006	Gasterosteus_aculeatus
ENSCSEG00000010939	cnot6b	100	71.250	ENSGAGG00000012176	CNOT6	100	71.607	Gopherus_agassizii
ENSCSEG00000010939	cnot6b	100	85.868	ENSGGOG00000003675	CNOT6	100	85.868	Gorilla_gorilla
ENSCSEG00000010939	cnot6b	100	97.138	ENSHBUG00000002819	cnot6b	100	97.138	Haplochromis_burtoni
ENSCSEG00000010939	cnot6b	100	84.615	ENSHGLG00000017756	CNOT6	100	84.615	Heterocephalus_glaber_female
ENSCSEG00000010939	cnot6b	100	84.615	ENSHGLG00100005747	CNOT6	100	84.615	Heterocephalus_glaber_male
ENSCSEG00000010939	cnot6b	100	95.170	ENSHCOG00000016176	cnot6b	100	95.170	Hippocampus_comes
ENSCSEG00000010939	cnot6b	100	89.803	ENSIPUG00000019831	cnot6a	100	89.803	Ictalurus_punctatus
ENSCSEG00000010939	cnot6b	100	89.088	ENSIPUG00000017482	cnot6b	100	89.088	Ictalurus_punctatus
ENSCSEG00000010939	cnot6b	100	85.689	ENSSTOG00000002803	CNOT6	100	85.689	Ictidomys_tridecemlineatus
ENSCSEG00000010939	cnot6b	100	85.331	ENSJJAG00000012296	Cnot6	100	85.331	Jaculus_jaculus
ENSCSEG00000010939	cnot6b	100	95.707	ENSKMAG00000004640	cnot6b	100	95.707	Kryptolebias_marmoratus
ENSCSEG00000010939	cnot6b	100	95.886	ENSLBEG00000027917	cnot6b	100	95.886	Labrus_bergylta
ENSCSEG00000010939	cnot6b	100	93.560	ENSLOCG00000010102	cnot6b	99	93.560	Lepisosteus_oculatus
ENSCSEG00000010939	cnot6b	100	86.583	ENSLAFG00000016742	CNOT6	100	86.583	Loxodonta_africana
ENSCSEG00000010939	cnot6b	100	85.868	ENSMFAG00000030867	CNOT6	100	85.868	Macaca_fascicularis
ENSCSEG00000010939	cnot6b	100	85.868	ENSMMUG00000018690	CNOT6	100	85.868	Macaca_mulatta
ENSCSEG00000010939	cnot6b	100	85.868	ENSMNEG00000038565	CNOT6	100	85.868	Macaca_nemestrina
ENSCSEG00000010939	cnot6b	100	85.868	ENSMLEG00000010555	CNOT6	100	85.868	Mandrillus_leucophaeus
ENSCSEG00000010939	cnot6b	100	98.032	ENSMAMG00000007515	cnot6b	100	98.032	Mastacembelus_armatus
ENSCSEG00000010939	cnot6b	100	96.959	ENSMZEG00005012899	cnot6b	100	96.959	Maylandia_zebra
ENSCSEG00000010939	cnot6b	100	85.152	ENSMAUG00000019798	Cnot6	100	85.152	Mesocricetus_auratus
ENSCSEG00000010939	cnot6b	98	77.839	ENSMICG00000028378	-	99	77.839	Microcebus_murinus
ENSCSEG00000010939	cnot6b	100	84.079	ENSMICG00000013018	-	100	84.079	Microcebus_murinus
ENSCSEG00000010939	cnot6b	100	85.152	ENSMOCG00000021662	Cnot6	100	85.152	Microtus_ochrogaster
ENSCSEG00000010939	cnot6b	100	93.560	ENSMMOG00000003227	cnot6b	100	93.560	Mola_mola
ENSCSEG00000010939	cnot6b	100	86.404	ENSMODG00000003979	CNOT6	100	86.762	Monodelphis_domestica
ENSCSEG00000010939	cnot6b	100	97.853	ENSMALG00000014251	cnot6b	100	97.853	Monopterus_albus
ENSCSEG00000010939	cnot6b	100	85.331	MGP_CAROLIEiJ_G0016277	Cnot6	100	85.331	Mus_caroli
ENSCSEG00000010939	cnot6b	100	85.331	ENSMUSG00000020362	Cnot6	100	85.331	Mus_musculus
ENSCSEG00000010939	cnot6b	100	85.331	MGP_PahariEiJ_G0017413	Cnot6	100	85.331	Mus_pahari
ENSCSEG00000010939	cnot6b	100	85.331	MGP_SPRETEiJ_G0017122	Cnot6	100	85.331	Mus_spretus
ENSCSEG00000010939	cnot6b	100	86.583	ENSMPUG00000000587	CNOT6	96	86.583	Mustela_putorius_furo
ENSCSEG00000010939	cnot6b	100	84.752	ENSMLUG00000010257	CNOT6	100	84.752	Myotis_lucifugus
ENSCSEG00000010939	cnot6b	100	84.436	ENSNGAG00000008269	Cnot6	100	84.615	Nannospalax_galili
ENSCSEG00000010939	cnot6b	100	97.138	ENSNBRG00000010798	cnot6b	100	97.138	Neolamprologus_brichardi
ENSCSEG00000010939	cnot6b	100	84.973	ENSNLEG00000002322	CNOT6	100	84.973	Nomascus_leucogenys
ENSCSEG00000010939	cnot6b	81	82.407	ENSMEUG00000000025	CNOT6	81	83.333	Notamacropus_eugenii
ENSCSEG00000010939	cnot6b	88	86.190	ENSOPRG00000008244	-	88	86.190	Ochotona_princeps
ENSCSEG00000010939	cnot6b	100	84.079	ENSODEG00000007041	CNOT6	100	84.079	Octodon_degus
ENSCSEG00000010939	cnot6b	75	95.981	ENSONIG00000013027	cnot6b	99	95.981	Oreochromis_niloticus
ENSCSEG00000010939	cnot6b	100	86.047	ENSOANG00000010226	CNOT6	100	86.047	Ornithorhynchus_anatinus
ENSCSEG00000010939	cnot6b	100	85.205	ENSOCUG00000011083	CNOT6	100	85.205	Oryctolagus_cuniculus
ENSCSEG00000010939	cnot6b	100	96.780	ENSORLG00000005059	cnot6b	100	96.780	Oryzias_latipes
ENSCSEG00000010939	cnot6b	100	96.780	ENSORLG00020012784	cnot6b	100	96.780	Oryzias_latipes_hni
ENSCSEG00000010939	cnot6b	94	96.367	ENSORLG00015022658	cnot6b	98	96.367	Oryzias_latipes_hsok
ENSCSEG00000010939	cnot6b	100	97.317	ENSOMEG00000005295	cnot6b	100	97.317	Oryzias_melastigma
ENSCSEG00000010939	cnot6b	94	84.981	ENSOGAG00000032470	CNOT6	100	84.981	Otolemur_garnettii
ENSCSEG00000010939	cnot6b	97	85.294	ENSOARG00000001003	CNOT6	100	85.294	Ovis_aries
ENSCSEG00000010939	cnot6b	100	85.868	ENSPPAG00000032253	CNOT6	100	85.868	Pan_paniscus
ENSCSEG00000010939	cnot6b	100	86.225	ENSPPRG00000011912	CNOT6	100	86.225	Panthera_pardus
ENSCSEG00000010939	cnot6b	100	86.225	ENSPTIG00000016794	CNOT6	100	86.225	Panthera_tigris_altaica
ENSCSEG00000010939	cnot6b	100	85.868	ENSPTRG00000017636	CNOT6	100	85.868	Pan_troglodytes
ENSCSEG00000010939	cnot6b	100	85.868	ENSPANG00000016191	CNOT6	100	85.868	Papio_anubis
ENSCSEG00000010939	cnot6b	100	90.161	ENSPKIG00000021368	cnot6b	100	90.161	Paramormyrops_kingsleyae
ENSCSEG00000010939	cnot6b	98	86.630	ENSPSIG00000017307	CNOT6	100	86.996	Pelodiscus_sinensis
ENSCSEG00000010939	cnot6b	100	96.064	ENSPMGG00000011238	cnot6b	100	96.064	Periophthalmus_magnuspinnatus
ENSCSEG00000010939	cnot6b	100	84.436	ENSPEMG00000000627	Cnot6	100	84.615	Peromyscus_maniculatus_bairdii
ENSCSEG00000010939	cnot6b	100	86.404	ENSPCIG00000020319	CNOT6	99	86.762	Phascolarctos_cinereus
ENSCSEG00000010939	cnot6b	100	95.707	ENSPFOG00000006291	cnot6b	100	95.707	Poecilia_formosa
ENSCSEG00000010939	cnot6b	100	92.129	ENSPLAG00000008266	cnot6b	100	92.129	Poecilia_latipinna
ENSCSEG00000010939	cnot6b	100	95.886	ENSPMEG00000009091	cnot6b	100	95.886	Poecilia_mexicana
ENSCSEG00000010939	cnot6b	100	94.275	ENSPREG00000003713	cnot6b	100	94.275	Poecilia_reticulata
ENSCSEG00000010939	cnot6b	100	85.868	ENSPPYG00000016137	CNOT6	100	85.868	Pongo_abelii
ENSCSEG00000010939	cnot6b	71	83.582	ENSPCAG00000005599	-	71	83.582	Procavia_capensis
ENSCSEG00000010939	cnot6b	100	80.143	ENSPCOG00000017359	CNOT6	100	80.859	Propithecus_coquereli
ENSCSEG00000010939	cnot6b	100	82.648	ENSPVAG00000003069	CNOT6	100	82.648	Pteropus_vampyrus
ENSCSEG00000010939	cnot6b	100	96.780	ENSPNYG00000000321	cnot6b	100	96.780	Pundamilia_nyererei
ENSCSEG00000010939	cnot6b	100	90.877	ENSPNAG00000029586	cnot6a	100	90.877	Pygocentrus_nattereri
ENSCSEG00000010939	cnot6b	100	89.624	ENSPNAG00000028816	cnot6b	100	89.624	Pygocentrus_nattereri
ENSCSEG00000010939	cnot6b	100	84.794	ENSRNOG00000054891	Cnot6	100	84.794	Rattus_norvegicus
ENSCSEG00000010939	cnot6b	100	85.689	ENSRBIG00000004309	CNOT6	100	85.689	Rhinopithecus_bieti
ENSCSEG00000010939	cnot6b	100	85.689	ENSRROG00000035378	CNOT6	100	85.689	Rhinopithecus_roxellana
ENSCSEG00000010939	cnot6b	100	86.047	ENSSBOG00000030494	CNOT6	100	86.047	Saimiri_boliviensis_boliviensis
ENSCSEG00000010939	cnot6b	100	86.404	ENSSHAG00000017436	CNOT6	100	86.762	Sarcophilus_harrisii
ENSCSEG00000010939	cnot6b	100	90.698	ENSSFOG00015022383	cnot6a	96	90.698	Scleropages_formosus
ENSCSEG00000010939	cnot6b	100	92.487	ENSSFOG00015015133	CNOT6	100	92.844	Scleropages_formosus
ENSCSEG00000010939	cnot6b	100	96.422	ENSSMAG00000003084	cnot6b	100	96.422	Scophthalmus_maximus
ENSCSEG00000010939	cnot6b	100	98.211	ENSSDUG00000004151	cnot6b	100	98.211	Seriola_dumerili
ENSCSEG00000010939	cnot6b	100	98.032	ENSSLDG00000004448	cnot6b	100	98.032	Seriola_lalandi_dorsalis
ENSCSEG00000010939	cnot6b	64	67.409	ENSSARG00000012650	-	100	67.409	Sorex_araneus
ENSCSEG00000010939	cnot6b	100	86.404	ENSSPUG00000007893	CNOT6	100	86.762	Sphenodon_punctatus
ENSCSEG00000010939	cnot6b	100	98.032	ENSSPAG00000000149	cnot6b	100	98.032	Stegastes_partitus
ENSCSEG00000010939	cnot6b	100	86.047	ENSSSCG00000014009	CNOT6	100	86.047	Sus_scrofa
ENSCSEG00000010939	cnot6b	100	86.404	ENSTGUG00000001119	CNOT6	100	86.762	Taeniopygia_guttata
ENSCSEG00000010939	cnot6b	100	93.023	ENSTRUG00000002818	cnot6b	100	93.023	Takifugu_rubripes
ENSCSEG00000010939	cnot6b	100	93.381	ENSTNIG00000004443	cnot6b	99	93.381	Tetraodon_nigroviridis
ENSCSEG00000010939	cnot6b	76	77.612	ENSTBEG00000017094	-	87	77.612	Tupaia_belangeri
ENSCSEG00000010939	cnot6b	100	85.868	ENSTTRG00000009363	CNOT6	100	85.868	Tursiops_truncatus
ENSCSEG00000010939	cnot6b	90	75.397	ENSUAMG00000004579	CNOT6	99	75.397	Ursus_americanus
ENSCSEG00000010939	cnot6b	100	82.253	ENSUMAG00000024577	CNOT6	100	82.253	Ursus_maritimus
ENSCSEG00000010939	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSCSEG00000010939	cnot6b	100	86.225	ENSVVUG00000026940	CNOT6	100	86.225	Vulpes_vulpes
ENSCSEG00000010939	cnot6b	100	92.487	ENSXCOG00000003360	cnot6b	100	92.487	Xiphophorus_couchianus
ENSCSEG00000010939	cnot6b	100	95.886	ENSXMAG00000008730	cnot6b	100	95.886	Xiphophorus_maculatus