EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011103 (Gene tree)
Gene ID: 103398100
Gene Symbol: pop5
Alias: fc69d03|wu:fc69d03|wu:fy24c05|zgc:110616
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 1366 bases
Position: chrZ:14968855-14970220
Accession: 103398100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017321	RNase_P_Rpp14	PF01900.19	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017535	-	453	XM_008336609	ENSCSEP00000017321	150 (aa)	XP_008334831	-

Gene Model

Click here to download ENSCSEG00000011103's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011103	pop5	100	90.361	ENSCSEG00000008332	-	100	90.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011103	pop5	91	58.088	ENSG00000167272	POP5	84	57.664	Homo_sapiens
ENSCSEG00000011103	pop5	94	78.014	ENSAPOG00000023686	POP5	81	80.147	Acanthochromis_polyacanthus
ENSCSEG00000011103	pop5	98	52.229	ENSAMEG00000008503	POP5	79	56.296	Ailuropoda_melanoleuca
ENSCSEG00000011103	pop5	93	80.714	ENSACIG00000018362	pop5	82	82.353	Amphilophus_citrinellus
ENSCSEG00000011103	pop5	93	80.714	ENSAOCG00000001930	pop5	81	82.353	Amphiprion_ocellaris
ENSCSEG00000011103	pop5	93	80.000	ENSAPEG00000006795	pop5	81	81.618	Amphiprion_percula
ENSCSEG00000011103	pop5	91	81.618	ENSATEG00000016792	pop5	81	81.618	Anabas_testudineus
ENSCSEG00000011103	pop5	55	60.241	ENSAPLG00000015761	POP5	77	60.241	Anas_platyrhynchos
ENSCSEG00000011103	pop5	96	48.611	ENSACAG00000003091	POP5	83	49.635	Anolis_carolinensis
ENSCSEG00000011103	pop5	91	59.124	ENSANAG00000023744	POP5	84	58.696	Aotus_nancymaae
ENSCSEG00000011103	pop5	91	82.353	ENSACLG00000021131	-	81	82.353	Astatotilapia_calliptera
ENSCSEG00000011103	pop5	91	58.824	ENSAMXG00000038175	pop5	79	58.824	Astyanax_mexicanus
ENSCSEG00000011103	pop5	91	58.824	ENSBTAG00000005385	POP5	80	58.824	Bos_taurus
ENSCSEG00000011103	pop5	91	58.824	ENSCJAG00000001309	POP5	84	58.394	Callithrix_jacchus
ENSCSEG00000011103	pop5	91	57.664	ENSCAFG00000010389	POP5	81	57.664	Canis_familiaris
ENSCSEG00000011103	pop5	91	57.664	ENSCAFG00020020663	POP5	81	57.664	Canis_lupus_dingo
ENSCSEG00000011103	pop5	91	58.824	ENSCHIG00000016402	POP5	81	58.394	Capra_hircus
ENSCSEG00000011103	pop5	91	56.934	ENSTSYG00000027616	POP5	81	56.934	Carlito_syrichta
ENSCSEG00000011103	pop5	54	60.494	ENSCAPG00000016873	POP5	72	60.494	Cavia_aperea
ENSCSEG00000011103	pop5	91	57.353	ENSCPOG00000012337	POP5	82	56.934	Cavia_porcellus
ENSCSEG00000011103	pop5	91	58.088	ENSCCAG00000023154	POP5	84	57.664	Cebus_capucinus
ENSCSEG00000011103	pop5	91	58.088	ENSCATG00000036825	POP5	84	57.664	Cercocebus_atys
ENSCSEG00000011103	pop5	91	57.353	ENSCLAG00000007808	POP5	80	57.353	Chinchilla_lanigera
ENSCSEG00000011103	pop5	91	58.088	ENSCSAG00000002246	POP5	84	57.664	Chlorocebus_sabaeus
ENSCSEG00000011103	pop5	91	46.324	ENSCHOG00000013969	POP5	81	45.985	Choloepus_hoffmanni
ENSCSEG00000011103	pop5	97	55.172	ENSCPBG00000011331	POP5	82	58.394	Chrysemys_picta_bellii
ENSCSEG00000011103	pop5	91	58.088	ENSCANG00000028001	POP5	84	57.664	Colobus_angolensis_palliatus
ENSCSEG00000011103	pop5	100	52.121	ENSCGRG00001017974	Pop5	81	56.934	Cricetulus_griseus_chok1gshd
ENSCSEG00000011103	pop5	100	52.121	ENSCGRG00000010102	Pop5	81	56.934	Cricetulus_griseus_crigri
ENSCSEG00000011103	pop5	99	49.398	ENSCVAG00000009152	-	80	54.745	Cyprinodon_variegatus
ENSCSEG00000011103	pop5	95	59.310	ENSDARG00000053452	pop5	82	59.420	Danio_rerio
ENSCSEG00000011103	pop5	91	57.143	ENSDNOG00000012668	-	73	57.143	Dasypus_novemcinctus
ENSCSEG00000011103	pop5	91	56.934	ENSDNOG00000045952	-	81	56.934	Dasypus_novemcinctus
ENSCSEG00000011103	pop5	91	58.824	ENSDORG00000029401	Pop5	81	58.824	Dipodomys_ordii
ENSCSEG00000011103	pop5	91	30.657	FBgn0036696	CG14057	91	30.657	Drosophila_melanogaster
ENSCSEG00000011103	pop5	91	54.412	ENSETEG00000009283	POP5	81	54.015	Echinops_telfairi
ENSCSEG00000011103	pop5	91	42.647	ENSEBUG00000016369	pop5	83	42.647	Eptatretus_burgeri
ENSCSEG00000011103	pop5	91	57.353	ENSEASG00005004714	POP5	80	57.353	Equus_asinus_asinus
ENSCSEG00000011103	pop5	91	57.353	ENSECAG00000010012	POP5	81	56.934	Equus_caballus
ENSCSEG00000011103	pop5	99	59.877	ENSELUG00000023394	pop5	83	68.889	Esox_lucius
ENSCSEG00000011103	pop5	91	57.664	ENSFCAG00000042614	POP5	81	57.664	Felis_catus
ENSCSEG00000011103	pop5	91	60.294	ENSFALG00000007537	POP5	81	60.294	Ficedula_albicollis
ENSCSEG00000011103	pop5	91	55.882	ENSFDAG00000009972	POP5	81	55.882	Fukomys_damarensis
ENSCSEG00000011103	pop5	98	70.732	ENSFHEG00000022341	pop5	81	80.741	Fundulus_heteroclitus
ENSCSEG00000011103	pop5	87	70.000	ENSGMOG00000001073	pop5	98	70.000	Gadus_morhua
ENSCSEG00000011103	pop5	90	77.037	ENSGAFG00000005937	-	81	77.037	Gambusia_affinis
ENSCSEG00000011103	pop5	91	79.412	ENSGACG00000012710	-	83	79.412	Gasterosteus_aculeatus
ENSCSEG00000011103	pop5	91	58.394	ENSGAGG00000016005	POP5	82	58.394	Gopherus_agassizii
ENSCSEG00000011103	pop5	91	58.088	ENSGGOG00000013505	POP5	84	57.664	Gorilla_gorilla
ENSCSEG00000011103	pop5	90	82.222	ENSHBUG00000011718	-	80	82.222	Haplochromis_burtoni
ENSCSEG00000011103	pop5	91	56.934	ENSHGLG00000011786	POP5	82	56.934	Heterocephalus_glaber_female
ENSCSEG00000011103	pop5	91	56.934	ENSHGLG00100014284	POP5	82	56.934	Heterocephalus_glaber_male
ENSCSEG00000011103	pop5	91	76.471	ENSHCOG00000011809	pop5	83	76.471	Hippocampus_comes
ENSCSEG00000011103	pop5	91	61.029	ENSIPUG00000003437	pop5	81	61.029	Ictalurus_punctatus
ENSCSEG00000011103	pop5	91	56.204	ENSSTOG00000012577	POP5	81	56.204	Ictidomys_tridecemlineatus
ENSCSEG00000011103	pop5	91	60.584	ENSJJAG00000001080	Pop5	81	60.145	Jaculus_jaculus
ENSCSEG00000011103	pop5	91	77.941	ENSKMAG00000011158	-	80	77.941	Kryptolebias_marmoratus
ENSCSEG00000011103	pop5	93	79.286	ENSLBEG00000008652	pop5	74	80.882	Labrus_bergylta
ENSCSEG00000011103	pop5	91	55.474	ENSLACG00000018188	POP5	85	55.474	Latimeria_chalumnae
ENSCSEG00000011103	pop5	89	63.158	ENSLOCG00000002924	pop5	79	63.158	Lepisosteus_oculatus
ENSCSEG00000011103	pop5	91	56.115	ENSLAFG00000014545	POP5	81	56.115	Loxodonta_africana
ENSCSEG00000011103	pop5	91	58.088	ENSMFAG00000045933	POP5	87	57.664	Macaca_fascicularis
ENSCSEG00000011103	pop5	91	58.088	ENSMMUG00000040120	POP5	84	57.664	Macaca_mulatta
ENSCSEG00000011103	pop5	91	58.088	ENSMNEG00000041716	POP5	84	57.664	Macaca_nemestrina
ENSCSEG00000011103	pop5	91	58.824	ENSMLEG00000029377	POP5	84	58.394	Mandrillus_leucophaeus
ENSCSEG00000011103	pop5	90	80.000	ENSMAMG00000002108	pop5	81	80.000	Mastacembelus_armatus
ENSCSEG00000011103	pop5	90	82.222	ENSMZEG00005000069	-	80	82.222	Maylandia_zebra
ENSCSEG00000011103	pop5	100	52.727	ENSMAUG00000019670	Pop5	81	57.664	Mesocricetus_auratus
ENSCSEG00000011103	pop5	91	56.934	ENSMICG00000008692	POP5	81	56.934	Microcebus_murinus
ENSCSEG00000011103	pop5	91	57.664	ENSMOCG00000013322	Pop5	81	57.664	Microtus_ochrogaster
ENSCSEG00000011103	pop5	87	77.099	ENSMMOG00000010471	pop5	80	77.099	Mola_mola
ENSCSEG00000011103	pop5	99	53.896	ENSMODG00000003066	POP5	56	58.394	Monodelphis_domestica
ENSCSEG00000011103	pop5	91	80.147	ENSMALG00000017797	-	81	80.147	Monopterus_albus
ENSCSEG00000011103	pop5	91	56.934	MGP_CAROLIEiJ_G0027618	Pop5	81	56.934	Mus_caroli
ENSCSEG00000011103	pop5	91	56.934	ENSMUSG00000060152	Pop5	81	56.934	Mus_musculus
ENSCSEG00000011103	pop5	91	55.474	MGP_PahariEiJ_G0024198	Pop5	81	55.474	Mus_pahari
ENSCSEG00000011103	pop5	91	56.204	MGP_SPRETEiJ_G0028616	Pop5	81	56.204	Mus_spretus
ENSCSEG00000011103	pop5	91	55.474	ENSMPUG00000003221	POP5	81	55.474	Mustela_putorius_furo
ENSCSEG00000011103	pop5	91	58.273	ENSMLUG00000014657	POP5	83	58.273	Myotis_lucifugus
ENSCSEG00000011103	pop5	91	57.664	ENSNGAG00000002594	Pop5	80	57.664	Nannospalax_galili
ENSCSEG00000011103	pop5	82	73.984	ENSNBRG00000001020	-	91	73.984	Neolamprologus_brichardi
ENSCSEG00000011103	pop5	91	58.088	ENSNLEG00000015839	POP5	84	57.664	Nomascus_leucogenys
ENSCSEG00000011103	pop5	91	56.618	ENSMEUG00000015288	POP5	84	56.618	Notamacropus_eugenii
ENSCSEG00000011103	pop5	95	53.846	ENSOPRG00000004327	POP5	80	56.204	Ochotona_princeps
ENSCSEG00000011103	pop5	96	48.611	ENSODEG00000010351	-	85	50.735	Octodon_degus
ENSCSEG00000011103	pop5	91	56.618	ENSODEG00000006549	-	81	56.204	Octodon_degus
ENSCSEG00000011103	pop5	91	82.353	ENSONIG00000011172	pop5	81	82.353	Oreochromis_niloticus
ENSCSEG00000011103	pop5	58	59.770	ENSOANG00000001792	-	76	59.770	Ornithorhynchus_anatinus
ENSCSEG00000011103	pop5	91	56.204	ENSOCUG00000006537	POP5	80	56.204	Oryctolagus_cuniculus
ENSCSEG00000011103	pop5	94	75.177	ENSORLG00000014745	pop5	82	77.206	Oryzias_latipes
ENSCSEG00000011103	pop5	94	75.887	ENSORLG00020001168	pop5	81	77.941	Oryzias_latipes_hni
ENSCSEG00000011103	pop5	91	77.941	ENSORLG00015013535	pop5	80	77.941	Oryzias_latipes_hsok
ENSCSEG00000011103	pop5	94	76.596	ENSOMEG00000017643	pop5	81	78.676	Oryzias_melastigma
ENSCSEG00000011103	pop5	91	55.882	ENSOGAG00000008528	POP5	84	55.474	Otolemur_garnettii
ENSCSEG00000011103	pop5	91	57.971	ENSOARG00000012764	POP5	81	57.554	Ovis_aries
ENSCSEG00000011103	pop5	91	58.088	ENSPPAG00000043719	POP5	84	57.664	Pan_paniscus
ENSCSEG00000011103	pop5	91	57.664	ENSPPRG00000006474	POP5	81	57.664	Panthera_pardus
ENSCSEG00000011103	pop5	91	57.664	ENSPTIG00000012194	POP5	81	57.664	Panthera_tigris_altaica
ENSCSEG00000011103	pop5	91	58.088	ENSPTRG00000005543	POP5	84	57.664	Pan_troglodytes
ENSCSEG00000011103	pop5	91	58.088	ENSPANG00000014166	POP5	84	57.664	Papio_anubis
ENSCSEG00000011103	pop5	90	69.630	ENSPKIG00000025154	pop5	81	69.630	Paramormyrops_kingsleyae
ENSCSEG00000011103	pop5	55	61.446	ENSPSIG00000013154	POP5	67	61.446	Pelodiscus_sinensis
ENSCSEG00000011103	pop5	99	64.242	ENSPMGG00000000812	-	82	71.852	Periophthalmus_magnuspinnatus
ENSCSEG00000011103	pop5	90	57.037	ENSPEMG00000017493	Pop5	80	57.037	Peromyscus_maniculatus_bairdii
ENSCSEG00000011103	pop5	95	72.535	ENSPFOG00000013000	pop5	94	72.549	Poecilia_formosa
ENSCSEG00000011103	pop5	93	74.286	ENSPLAG00000014070	pop5	81	76.296	Poecilia_latipinna
ENSCSEG00000011103	pop5	93	75.000	ENSPMEG00000024039	pop5	81	77.037	Poecilia_mexicana
ENSCSEG00000011103	pop5	93	75.000	ENSPMEG00000012863	POP5	81	77.037	Poecilia_mexicana
ENSCSEG00000011103	pop5	90	80.000	ENSPREG00000020151	pop5	81	80.000	Poecilia_reticulata
ENSCSEG00000011103	pop5	91	58.394	ENSPPYG00000005036	POP5	71	58.394	Pongo_abelii
ENSCSEG00000011103	pop5	69	53.846	ENSPCAG00000004788	POP5	100	53.846	Procavia_capensis
ENSCSEG00000011103	pop5	91	56.934	ENSPCOG00000017618	POP5	81	56.934	Propithecus_coquereli
ENSCSEG00000011103	pop5	91	57.664	ENSPVAG00000002233	POP5	81	57.664	Pteropus_vampyrus
ENSCSEG00000011103	pop5	91	81.618	ENSPNYG00000002679	pop5	81	81.618	Pundamilia_nyererei
ENSCSEG00000011103	pop5	91	57.353	ENSPNAG00000012662	pop5	73	60.000	Pygocentrus_nattereri
ENSCSEG00000011103	pop5	91	56.204	ENSRNOG00000001199	Pop5	81	56.204	Rattus_norvegicus
ENSCSEG00000011103	pop5	91	58.088	ENSRBIG00000043505	POP5	87	57.664	Rhinopithecus_bieti
ENSCSEG00000011103	pop5	91	58.088	ENSRROG00000045063	POP5	87	57.664	Rhinopithecus_roxellana
ENSCSEG00000011103	pop5	91	58.088	ENSSBOG00000032691	POP5	97	58.333	Saimiri_boliviensis_boliviensis
ENSCSEG00000011103	pop5	91	67.647	ENSSFOG00015005630	pop5	86	68.421	Scleropages_formosus
ENSCSEG00000011103	pop5	91	81.618	ENSSMAG00000018868	pop5	80	81.618	Scophthalmus_maximus
ENSCSEG00000011103	pop5	99	70.303	ENSSDUG00000001282	-	81	80.147	Seriola_dumerili
ENSCSEG00000011103	pop5	91	80.882	ENSSLDG00000017031	pop5	81	80.882	Seriola_lalandi_dorsalis
ENSCSEG00000011103	pop5	91	80.882	ENSSLDG00000003801	-	81	80.882	Seriola_lalandi_dorsalis
ENSCSEG00000011103	pop5	69	55.769	ENSSARG00000005564	POP5	64	55.769	Sorex_araneus
ENSCSEG00000011103	pop5	91	56.618	ENSSPUG00000015531	POP5	81	56.618	Sphenodon_punctatus
ENSCSEG00000011103	pop5	91	80.147	ENSSPAG00000015306	pop5	81	80.147	Stegastes_partitus
ENSCSEG00000011103	pop5	91	56.618	ENSSSCG00000009912	POP5	81	56.204	Sus_scrofa
ENSCSEG00000011103	pop5	99	52.795	ENSTGUG00000009602	POP5	83	58.824	Taeniopygia_guttata
ENSCSEG00000011103	pop5	90	76.296	ENSTRUG00000016214	pop5	81	76.296	Takifugu_rubripes
ENSCSEG00000011103	pop5	91	78.102	ENSTNIG00000011465	pop5	82	78.102	Tetraodon_nigroviridis
ENSCSEG00000011103	pop5	91	57.664	ENSTBEG00000010131	POP5	81	57.664	Tupaia_belangeri
ENSCSEG00000011103	pop5	91	57.664	ENSTTRG00000000153	POP5	81	57.664	Tursiops_truncatus
ENSCSEG00000011103	pop5	97	50.980	ENSUAMG00000015541	POP5	61	54.962	Ursus_americanus
ENSCSEG00000011103	pop5	98	52.258	ENSUMAG00000006137	POP5	79	56.391	Ursus_maritimus
ENSCSEG00000011103	pop5	91	59.124	ENSVPAG00000010365	POP5	81	59.124	Vicugna_pacos
ENSCSEG00000011103	pop5	91	57.664	ENSVVUG00000021154	POP5	81	57.664	Vulpes_vulpes
ENSCSEG00000011103	pop5	67	52.830	ENSXETG00000031793	POP5	75	59.302	Xenopus_tropicalis
ENSCSEG00000011103	pop5	90	77.037	ENSXMAG00000003508	-	70	77.037	Xiphophorus_maculatus