EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000011196 (Gene tree)
Gene ID: 103379323
Gene Symbol: larp6a
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7713 bases
Position: chr5:17097187-17104899
Accession: 103379323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017450	La	PF05383.17	8.8e-19	1	1
ENSCSEP00000017456	La	PF05383.17	8.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017674	-	3379	-	ENSCSEP00000017456	668 (aa)	-	-
ENSCSET00000017668	-	5647	XM_008310838	ENSCSEP00000017450	663 (aa)	XP_008309060	-

Gene Model

Click here to download ENSCSEG00000011196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011196	larp6a	65	59.234	ENSG00000166173	LARP6	95	56.936	Homo_sapiens
ENSCSEG00000011196	larp6a	94	89.120	ENSAPOG00000021773	larp6a	90	88.800	Acanthochromis_polyacanthus
ENSCSEG00000011196	larp6a	63	59.070	ENSAMEG00000008897	LARP6	97	59.767	Ailuropoda_melanoleuca
ENSCSEG00000011196	larp6a	75	93.400	ENSACIG00000005166	larp6a	99	93.400	Amphilophus_citrinellus
ENSCSEG00000011196	larp6a	94	89.600	ENSAOCG00000002284	larp6a	90	89.280	Amphiprion_ocellaris
ENSCSEG00000011196	larp6a	77	92.802	ENSAPEG00000008077	larp6a	100	92.802	Amphiprion_percula
ENSCSEG00000011196	larp6a	94	88.273	ENSATEG00000004018	larp6a	90	88.273	Anabas_testudineus
ENSCSEG00000011196	larp6a	62	59.719	ENSAPLG00000009914	LARP6	98	59.719	Anas_platyrhynchos
ENSCSEG00000011196	larp6a	64	59.813	ENSACAG00000008613	LARP6	99	59.861	Anolis_carolinensis
ENSCSEG00000011196	larp6a	65	59.459	ENSANAG00000024860	LARP6	95	57.143	Aotus_nancymaae
ENSCSEG00000011196	larp6a	94	87.200	ENSACLG00000018561	larp6a	88	87.040	Astatotilapia_calliptera
ENSCSEG00000011196	larp6a	75	76.505	ENSAMXG00000029387	larp6a	77	77.282	Astyanax_mexicanus
ENSCSEG00000011196	larp6a	63	40.233	ENSAMXG00000036816	-	94	41.395	Astyanax_mexicanus
ENSCSEG00000011196	larp6a	65	59.910	ENSBTAG00000003915	LARP6	95	57.971	Bos_taurus
ENSCSEG00000011196	larp6a	65	59.234	ENSCJAG00000018642	-	95	57.025	Callithrix_jacchus
ENSCSEG00000011196	larp6a	69	56.405	ENSCJAG00000046236	-	95	56.405	Callithrix_jacchus
ENSCSEG00000011196	larp6a	63	59.207	ENSCAFG00000017616	LARP6	97	59.907	Canis_familiaris
ENSCSEG00000011196	larp6a	69	56.432	ENSCAFG00020007296	LARP6	95	57.054	Canis_lupus_dingo
ENSCSEG00000011196	larp6a	65	59.910	ENSCHIG00000013742	LARP6	95	57.971	Capra_hircus
ENSCSEG00000011196	larp6a	63	58.042	ENSTSYG00000028124	LARP6	85	58.741	Carlito_syrichta
ENSCSEG00000011196	larp6a	62	58.451	ENSCAPG00000015452	LARP6	97	59.155	Cavia_aperea
ENSCSEG00000011196	larp6a	70	55.738	ENSCPOG00000022687	LARP6	96	55.943	Cavia_porcellus
ENSCSEG00000011196	larp6a	65	59.459	ENSCCAG00000036320	LARP6	95	57.350	Cebus_capucinus
ENSCSEG00000011196	larp6a	65	59.234	ENSCATG00000042432	LARP6	95	56.936	Cercocebus_atys
ENSCSEG00000011196	larp6a	65	58.784	ENSCLAG00000007893	LARP6	95	56.701	Chinchilla_lanigera
ENSCSEG00000011196	larp6a	65	59.234	ENSCSAG00000013672	LARP6	95	56.936	Chlorocebus_sabaeus
ENSCSEG00000011196	larp6a	65	58.333	ENSCHOG00000003318	LARP6	98	56.936	Choloepus_hoffmanni
ENSCSEG00000011196	larp6a	69	60.128	ENSCPBG00000010771	LARP6	88	60.128	Chrysemys_picta_bellii
ENSCSEG00000011196	larp6a	63	59.674	ENSCANG00000025833	LARP6	98	59.674	Colobus_angolensis_palliatus
ENSCSEG00000011196	larp6a	65	58.784	ENSCGRG00001024472	Larp6	95	58.058	Cricetulus_griseus_chok1gshd
ENSCSEG00000011196	larp6a	65	58.784	ENSCGRG00000004527	Larp6	95	58.058	Cricetulus_griseus_crigri
ENSCSEG00000011196	larp6a	96	82.812	ENSCVAG00000009605	larp6a	90	83.333	Cyprinodon_variegatus
ENSCSEG00000011196	larp6a	71	82.636	ENSDARG00000005355	larp6a	99	85.253	Danio_rerio
ENSCSEG00000011196	larp6a	65	58.108	ENSDNOG00000042993	LARP6	95	57.025	Dasypus_novemcinctus
ENSCSEG00000011196	larp6a	69	55.072	ENSDORG00000023910	Larp6	95	56.818	Dipodomys_ordii
ENSCSEG00000011196	larp6a	65	59.234	ENSEASG00005005490	LARP6	69	57.557	Equus_asinus_asinus
ENSCSEG00000011196	larp6a	65	59.234	ENSECAG00000014190	LARP6	96	58.797	Equus_caballus
ENSCSEG00000011196	larp6a	96	74.080	ENSELUG00000007341	larp6a	92	75.000	Esox_lucius
ENSCSEG00000011196	larp6a	65	58.108	ENSFCAG00000001361	LARP6	95	57.143	Felis_catus
ENSCSEG00000011196	larp6a	65	61.036	ENSFALG00000012389	LARP6	97	59.034	Ficedula_albicollis
ENSCSEG00000011196	larp6a	63	58.605	ENSFDAG00000019994	LARP6	82	59.302	Fukomys_damarensis
ENSCSEG00000011196	larp6a	96	83.438	ENSFHEG00000010312	larp6a	91	83.974	Fundulus_heteroclitus
ENSCSEG00000011196	larp6a	65	60.497	ENSGALG00000004046	LARP6	92	59.023	Gallus_gallus
ENSCSEG00000011196	larp6a	96	82.344	ENSGAFG00000009426	larp6a	91	83.013	Gambusia_affinis
ENSCSEG00000011196	larp6a	65	90.465	ENSGACG00000014622	larp6a	99	90.465	Gasterosteus_aculeatus
ENSCSEG00000011196	larp6a	60	60.197	ENSGAGG00000010802	LARP6	63	58.486	Gopherus_agassizii
ENSCSEG00000011196	larp6a	63	59.674	ENSGGOG00000024151	LARP6	98	59.674	Gorilla_gorilla
ENSCSEG00000011196	larp6a	94	87.040	ENSHBUG00000021014	larp6a	88	86.880	Haplochromis_burtoni
ENSCSEG00000011196	larp6a	65	59.234	ENSHGLG00000015112	LARP6	95	57.526	Heterocephalus_glaber_female
ENSCSEG00000011196	larp6a	63	59.674	ENSHGLG00100013159	LARP6	98	60.373	Heterocephalus_glaber_male
ENSCSEG00000011196	larp6a	73	85.193	ENSHCOG00000001241	larp6a	100	82.500	Hippocampus_comes
ENSCSEG00000011196	larp6a	77	74.573	ENSIPUG00000010187	larp6	78	75.332	Ictalurus_punctatus
ENSCSEG00000011196	larp6a	66	36.117	ENSIPUG00000002828	-	97	40.235	Ictalurus_punctatus
ENSCSEG00000011196	larp6a	65	58.333	ENSSTOG00000024279	LARP6	93	59.009	Ictidomys_tridecemlineatus
ENSCSEG00000011196	larp6a	65	58.559	ENSJJAG00000011013	Larp6	96	57.350	Jaculus_jaculus
ENSCSEG00000011196	larp6a	92	78.972	ENSKMAG00000001702	larp6a	90	78.899	Kryptolebias_marmoratus
ENSCSEG00000011196	larp6a	77	87.719	ENSLBEG00000000170	larp6a	100	87.719	Labrus_bergylta
ENSCSEG00000011196	larp6a	75	61.782	ENSLACG00000018706	LARP6	95	62.846	Latimeria_chalumnae
ENSCSEG00000011196	larp6a	62	41.647	ENSLACG00000002786	-	95	44.181	Latimeria_chalumnae
ENSCSEG00000011196	larp6a	94	66.244	ENSLOCG00000014592	larp6a	90	65.650	Lepisosteus_oculatus
ENSCSEG00000011196	larp6a	63	44.111	ENSLOCG00000008547	-	81	47.100	Lepisosteus_oculatus
ENSCSEG00000011196	larp6a	65	59.685	ENSLAFG00000016343	LARP6	96	60.360	Loxodonta_africana
ENSCSEG00000011196	larp6a	65	59.234	ENSMFAG00000035507	LARP6	95	59.234	Macaca_fascicularis
ENSCSEG00000011196	larp6a	65	59.234	ENSMMUG00000004429	LARP6	96	57.895	Macaca_mulatta
ENSCSEG00000011196	larp6a	65	59.234	ENSMNEG00000045335	LARP6	95	56.936	Macaca_nemestrina
ENSCSEG00000011196	larp6a	63	59.674	ENSMLEG00000038587	LARP6	98	59.674	Mandrillus_leucophaeus
ENSCSEG00000011196	larp6a	94	89.013	ENSMAMG00000005261	larp6a	90	89.137	Mastacembelus_armatus
ENSCSEG00000011196	larp6a	94	87.200	ENSMZEG00005005774	larp6a	88	87.040	Maylandia_zebra
ENSCSEG00000011196	larp6a	62	62.118	ENSMGAG00000005077	LARP6	98	62.118	Meleagris_gallopavo
ENSCSEG00000011196	larp6a	65	59.009	ENSMAUG00000018486	Larp6	95	57.851	Mesocricetus_auratus
ENSCSEG00000011196	larp6a	65	57.883	ENSMICG00000011234	LARP6	95	56.198	Microcebus_murinus
ENSCSEG00000011196	larp6a	65	59.009	ENSMOCG00000010492	Larp6	95	57.645	Microtus_ochrogaster
ENSCSEG00000011196	larp6a	77	89.279	ENSMMOG00000016284	larp6a	100	89.279	Mola_mola
ENSCSEG00000011196	larp6a	65	56.433	ENSMODG00000009034	LARP6	97	52.816	Monodelphis_domestica
ENSCSEG00000011196	larp6a	76	91.071	ENSMALG00000014439	larp6a	98	91.071	Monopterus_albus
ENSCSEG00000011196	larp6a	65	57.658	MGP_CAROLIEiJ_G0032314	Larp6	95	57.231	Mus_caroli
ENSCSEG00000011196	larp6a	65	57.658	ENSMUSG00000034839	Larp6	95	57.438	Mus_musculus
ENSCSEG00000011196	larp6a	65	58.333	MGP_PahariEiJ_G0015180	Larp6	95	57.438	Mus_pahari
ENSCSEG00000011196	larp6a	65	57.658	MGP_SPRETEiJ_G0033452	Larp6	95	57.438	Mus_spretus
ENSCSEG00000011196	larp6a	63	58.837	ENSMPUG00000017086	LARP6	97	59.535	Mustela_putorius_furo
ENSCSEG00000011196	larp6a	65	58.427	ENSMLUG00000010319	LARP6	95	56.701	Myotis_lucifugus
ENSCSEG00000011196	larp6a	65	59.009	ENSNGAG00000014238	Larp6	95	57.438	Nannospalax_galili
ENSCSEG00000011196	larp6a	77	91.634	ENSNBRG00000008120	larp6a	100	91.634	Neolamprologus_brichardi
ENSCSEG00000011196	larp6a	65	59.234	ENSNLEG00000013691	LARP6	95	57.054	Nomascus_leucogenys
ENSCSEG00000011196	larp6a	54	64.706	ENSMEUG00000002270	LARP6	83	66.667	Notamacropus_eugenii
ENSCSEG00000011196	larp6a	53	54.098	ENSOPRG00000004868	-	99	56.319	Ochotona_princeps
ENSCSEG00000011196	larp6a	65	58.409	ENSODEG00000015958	LARP6	95	57.083	Octodon_degus
ENSCSEG00000011196	larp6a	77	91.085	ENSONIG00000002901	larp6a	100	91.085	Oreochromis_niloticus
ENSCSEG00000011196	larp6a	61	59.559	ENSOCUG00000009306	LARP6	97	59.620	Oryctolagus_cuniculus
ENSCSEG00000011196	larp6a	75	89.135	ENSORLG00000014256	larp6a	99	89.135	Oryzias_latipes
ENSCSEG00000011196	larp6a	96	83.022	ENSORLG00020019657	larp6a	91	83.227	Oryzias_latipes_hni
ENSCSEG00000011196	larp6a	96	83.022	ENSORLG00015017915	larp6a	91	83.227	Oryzias_latipes_hsok
ENSCSEG00000011196	larp6a	96	83.931	ENSOMEG00000017049	larp6a	91	84.320	Oryzias_melastigma
ENSCSEG00000011196	larp6a	69	55.950	ENSOGAG00000000522	LARP6	95	57.380	Otolemur_garnettii
ENSCSEG00000011196	larp6a	63	60.233	ENSOARG00000018750	LARP6	96	60.465	Ovis_aries
ENSCSEG00000011196	larp6a	63	59.674	ENSPPAG00000031247	LARP6	98	59.674	Pan_paniscus
ENSCSEG00000011196	larp6a	65	57.883	ENSPPRG00000011282	LARP6	95	56.936	Panthera_pardus
ENSCSEG00000011196	larp6a	63	58.974	ENSPTIG00000015318	LARP6	84	59.674	Panthera_tigris_altaica
ENSCSEG00000011196	larp6a	65	59.234	ENSPTRG00000007234	LARP6	95	56.936	Pan_troglodytes
ENSCSEG00000011196	larp6a	65	59.234	ENSPANG00000016362	LARP6	95	56.936	Papio_anubis
ENSCSEG00000011196	larp6a	96	65.000	ENSPKIG00000020103	larp6a	91	76.471	Paramormyrops_kingsleyae
ENSCSEG00000011196	larp6a	89	68.272	ENSPKIG00000004511	LARP6	88	67.710	Paramormyrops_kingsleyae
ENSCSEG00000011196	larp6a	75	91.800	ENSPMGG00000006958	larp6a	99	91.800	Periophthalmus_magnuspinnatus
ENSCSEG00000011196	larp6a	69	55.579	ENSPEMG00000012909	Larp6	95	56.818	Peromyscus_maniculatus_bairdii
ENSCSEG00000011196	larp6a	65	56.951	ENSPCIG00000020765	LARP6	91	54.918	Phascolarctos_cinereus
ENSCSEG00000011196	larp6a	77	88.155	ENSPFOG00000014175	larp6a	100	88.155	Poecilia_formosa
ENSCSEG00000011196	larp6a	96	81.762	ENSPLAG00000011105	larp6a	91	83.043	Poecilia_latipinna
ENSCSEG00000011196	larp6a	96	82.791	ENSPMEG00000011085	larp6a	91	83.466	Poecilia_mexicana
ENSCSEG00000011196	larp6a	96	82.399	ENSPREG00000008067	larp6a	91	83.706	Poecilia_reticulata
ENSCSEG00000011196	larp6a	65	59.234	ENSPPYG00000006604	LARP6	95	57.350	Pongo_abelii
ENSCSEG00000011196	larp6a	65	57.883	ENSPCOG00000022934	LARP6	95	56.082	Propithecus_coquereli
ENSCSEG00000011196	larp6a	65	59.234	ENSPVAG00000005618	LARP6	95	57.764	Pteropus_vampyrus
ENSCSEG00000011196	larp6a	77	91.245	ENSPNYG00000009835	larp6a	100	91.245	Pundamilia_nyererei
ENSCSEG00000011196	larp6a	75	77.193	ENSPNAG00000017966	larp6a	83	77.778	Pygocentrus_nattereri
ENSCSEG00000011196	larp6a	65	58.559	ENSRNOG00000012438	Larp6	95	57.645	Rattus_norvegicus
ENSCSEG00000011196	larp6a	65	59.050	ENSRBIG00000032902	LARP6	88	59.050	Rhinopithecus_bieti
ENSCSEG00000011196	larp6a	65	59.234	ENSRROG00000043074	LARP6	95	56.936	Rhinopithecus_roxellana
ENSCSEG00000011196	larp6a	63	59.907	ENSSBOG00000024190	LARP6	98	59.907	Saimiri_boliviensis_boliviensis
ENSCSEG00000011196	larp6a	63	56.542	ENSSHAG00000018495	LARP6	97	57.009	Sarcophilus_harrisii
ENSCSEG00000011196	larp6a	71	73.739	ENSSFOG00015002254	LARP6	100	70.291	Scleropages_formosus
ENSCSEG00000011196	larp6a	65	77.598	ENSSFOG00015023268	larp6a	95	72.857	Scleropages_formosus
ENSCSEG00000011196	larp6a	96	84.414	ENSSMAG00000009953	larp6a	89	86.058	Scophthalmus_maximus
ENSCSEG00000011196	larp6a	94	90.560	ENSSDUG00000007438	larp6a	90	90.560	Seriola_dumerili
ENSCSEG00000011196	larp6a	94	90.400	ENSSLDG00000016647	larp6a	90	90.400	Seriola_lalandi_dorsalis
ENSCSEG00000011196	larp6a	63	61.939	ENSSPUG00000011312	LARP6	97	61.939	Sphenodon_punctatus
ENSCSEG00000011196	larp6a	94	89.600	ENSSPAG00000020502	larp6a	90	89.280	Stegastes_partitus
ENSCSEG00000011196	larp6a	65	60.135	ENSSSCG00000004974	LARP6	95	57.971	Sus_scrofa
ENSCSEG00000011196	larp6a	62	60.798	ENSTGUG00000005808	LARP6	98	60.798	Taeniopygia_guttata
ENSCSEG00000011196	larp6a	96	78.538	ENSTRUG00000003151	larp6a	91	79.426	Takifugu_rubripes
ENSCSEG00000011196	larp6a	73	83.299	ENSTNIG00000011926	larp6a	100	83.505	Tetraodon_nigroviridis
ENSCSEG00000011196	larp6a	62	58.645	ENSTBEG00000015077	LARP6	98	59.346	Tupaia_belangeri
ENSCSEG00000011196	larp6a	63	59.907	ENSUAMG00000010467	LARP6	84	60.140	Ursus_americanus
ENSCSEG00000011196	larp6a	63	58.974	ENSVVUG00000015227	LARP6	92	59.674	Vulpes_vulpes
ENSCSEG00000011196	larp6a	70	63.410	ENSXETG00000020340	larp6	94	63.169	Xenopus_tropicalis
ENSCSEG00000011196	larp6a	72	90.966	ENSXCOG00000012654	larp6a	98	90.966	Xiphophorus_couchianus
ENSCSEG00000011196	larp6a	96	82.683	ENSXMAG00000021015	larp6a	87	83.360	Xiphophorus_maculatus