EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011209 (Gene tree)
Gene ID: 103386413
Gene Symbol: gnl3l
Alias: flj10613|flj10613l|si:dkey-13a21.8|zgc:110536
Full Name: transcription factor binding to IGHM enhancer 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 12451 bases
Position: chr11:13006509-13018959
Accession: 103386412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017516	MMR_HSR1	PF01926.23	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017695	-	1359	XM_008320662	ENSCSEP00000017477	452 (aa)	XP_008318884	-
ENSCSET00000017734	-	1665	XM_008320663	ENSCSEP00000017516	554 (aa)	XP_008318885	-

Gene Model

Click here to download ENSCSEG00000011209's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011209	gnl3l	81	39.514	ENSCSEG00000005009	gnl3	82	39.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011209	gnl3l	92	51.141	ENSG00000130119	GNL3L	88	51.141	Homo_sapiens
ENSCSEG00000011209	gnl3l	100	83.099	ENSAPOG00000012629	gnl3l	100	83.275	Acanthochromis_polyacanthus
ENSCSEG00000011209	gnl3l	92	49.617	ENSAMEG00000002528	GNL3L	88	49.617	Ailuropoda_melanoleuca
ENSCSEG00000011209	gnl3l	99	81.835	ENSACIG00000010900	gnl3l	99	81.835	Amphilophus_citrinellus
ENSCSEG00000011209	gnl3l	99	83.009	ENSAOCG00000020369	gnl3l	99	83.009	Amphiprion_ocellaris
ENSCSEG00000011209	gnl3l	99	83.009	ENSAPEG00000023280	gnl3l	99	83.009	Amphiprion_percula
ENSCSEG00000011209	gnl3l	99	81.449	ENSATEG00000009762	gnl3l	99	81.449	Anabas_testudineus
ENSCSEG00000011209	gnl3l	92	67.906	ENSACAG00000012525	GNL3L	90	68.431	Anolis_carolinensis
ENSCSEG00000011209	gnl3l	93	41.431	ENSANAG00000022057	-	95	41.590	Aotus_nancymaae
ENSCSEG00000011209	gnl3l	92	50.760	ENSANAG00000023117	-	89	50.760	Aotus_nancymaae
ENSCSEG00000011209	gnl3l	99	81.528	ENSACLG00000021244	gnl3l	99	81.528	Astatotilapia_calliptera
ENSCSEG00000011209	gnl3l	99	71.504	ENSAMXG00000006376	gnl3l	99	71.504	Astyanax_mexicanus
ENSCSEG00000011209	gnl3l	91	50.958	ENSBTAG00000031564	GNL3L	88	50.958	Bos_taurus
ENSCSEG00000011209	gnl3l	92	50.772	ENSCJAG00000000252	GNL3L	89	50.772	Callithrix_jacchus
ENSCSEG00000011209	gnl3l	92	50.382	ENSCAFG00000016455	GNL3L	79	50.382	Canis_familiaris
ENSCSEG00000011209	gnl3l	92	50.382	ENSCAFG00020013979	GNL3L	83	50.382	Canis_lupus_dingo
ENSCSEG00000011209	gnl3l	92	50.954	ENSTSYG00000004110	GNL3L	88	50.954	Carlito_syrichta
ENSCSEG00000011209	gnl3l	92	49.427	ENSCPOG00000015617	GNL3L	89	49.427	Cavia_porcellus
ENSCSEG00000011209	gnl3l	92	52.063	ENSCCAG00000023052	GNL3L	88	52.063	Cebus_capucinus
ENSCSEG00000011209	gnl3l	90	51.064	ENSCATG00000031729	GNL3L	88	50.760	Cercocebus_atys
ENSCSEG00000011209	gnl3l	92	40.945	ENSCATG00000036833	-	71	47.606	Cercocebus_atys
ENSCSEG00000011209	gnl3l	92	50.286	ENSCLAG00000003823	GNL3L	89	50.286	Chinchilla_lanigera
ENSCSEG00000011209	gnl3l	82	52.632	ENSCSAG00000012324	GNL3L	97	52.643	Chlorocebus_sabaeus
ENSCSEG00000011209	gnl3l	91	48.323	ENSCPBG00000017415	GNL3L	65	58.840	Chrysemys_picta_bellii
ENSCSEG00000011209	gnl3l	92	40.234	ENSCANG00000015664	-	88	40.234	Colobus_angolensis_palliatus
ENSCSEG00000011209	gnl3l	92	50.760	ENSCANG00000035316	GNL3L	87	50.760	Colobus_angolensis_palliatus
ENSCSEG00000011209	gnl3l	92	50.474	ENSCGRG00001017459	Gnl3l	89	50.474	Cricetulus_griseus_chok1gshd
ENSCSEG00000011209	gnl3l	92	50.474	ENSCGRG00000017708	Gnl3l	89	50.474	Cricetulus_griseus_crigri
ENSCSEG00000011209	gnl3l	99	80.605	ENSCVAG00000001161	gnl3l	99	80.392	Cyprinodon_variegatus
ENSCSEG00000011209	gnl3l	99	75.709	ENSDARG00000020595	gnl3l	99	75.844	Danio_rerio
ENSCSEG00000011209	gnl3l	92	49.231	ENSDNOG00000048230	GNL3L	86	59.053	Dasypus_novemcinctus
ENSCSEG00000011209	gnl3l	92	49.341	ENSDORG00000029665	Gnl3l	89	49.341	Dipodomys_ordii
ENSCSEG00000011209	gnl3l	91	44.141	ENSETEG00000019317	GNL3L	88	44.141	Echinops_telfairi
ENSCSEG00000011209	gnl3l	65	50.949	ENSEBUG00000011390	gnl3l	99	50.729	Eptatretus_burgeri
ENSCSEG00000011209	gnl3l	91	50.000	ENSEASG00005006957	GNL3L	98	50.097	Equus_asinus_asinus
ENSCSEG00000011209	gnl3l	91	49.805	ENSECAG00000000035	GNL3L	88	49.805	Equus_caballus
ENSCSEG00000011209	gnl3l	99	77.522	ENSELUG00000004555	gnl3l	99	77.522	Esox_lucius
ENSCSEG00000011209	gnl3l	92	50.382	ENSFCAG00000008699	GNL3L	76	50.382	Felis_catus
ENSCSEG00000011209	gnl3l	92	50.474	ENSFDAG00000020122	GNL3L	89	50.380	Fukomys_damarensis
ENSCSEG00000011209	gnl3l	92	82.583	ENSGMOG00000018085	gnl3l	91	82.583	Gadus_morhua
ENSCSEG00000011209	gnl3l	98	80.714	ENSGAFG00000011132	gnl3l	99	80.714	Gambusia_affinis
ENSCSEG00000011209	gnl3l	99	80.247	ENSGACG00000010320	gnl3l	99	83.918	Gasterosteus_aculeatus
ENSCSEG00000011209	gnl3l	92	60.118	ENSGAGG00000008638	GNL3L	67	60.314	Gopherus_agassizii
ENSCSEG00000011209	gnl3l	92	50.947	ENSGGOG00000007550	GNL3L	88	50.947	Gorilla_gorilla
ENSCSEG00000011209	gnl3l	99	81.705	ENSHBUG00000014227	gnl3l	97	86.914	Haplochromis_burtoni
ENSCSEG00000011209	gnl3l	76	43.936	ENSHGLG00000010598	-	86	43.936	Heterocephalus_glaber_female
ENSCSEG00000011209	gnl3l	92	49.618	ENSHGLG00000001778	GNL3L	89	49.618	Heterocephalus_glaber_female
ENSCSEG00000011209	gnl3l	92	49.618	ENSHGLG00100000291	GNL3L	89	49.618	Heterocephalus_glaber_male
ENSCSEG00000011209	gnl3l	92	45.644	ENSHGLG00100012564	-	92	45.644	Heterocephalus_glaber_male
ENSCSEG00000011209	gnl3l	100	80.969	ENSHCOG00000009877	gnl3l	100	80.969	Hippocampus_comes
ENSCSEG00000011209	gnl3l	99	67.730	ENSIPUG00000015441	gnl3l	99	68.085	Ictalurus_punctatus
ENSCSEG00000011209	gnl3l	92	51.451	ENSSTOG00000023157	GNL3L	89	51.451	Ictidomys_tridecemlineatus
ENSCSEG00000011209	gnl3l	92	51.378	ENSJJAG00000011439	Gnl3l	88	51.378	Jaculus_jaculus
ENSCSEG00000011209	gnl3l	99	78.431	ENSKMAG00000020874	gnl3l	99	78.431	Kryptolebias_marmoratus
ENSCSEG00000011209	gnl3l	98	80.686	ENSLBEG00000018256	gnl3l	97	80.686	Labrus_bergylta
ENSCSEG00000011209	gnl3l	98	80.686	ENSLBEG00000005837	gnl3l	97	80.686	Labrus_bergylta
ENSCSEG00000011209	gnl3l	61	73.824	ENSLACG00000010188	GNL3L	99	73.824	Latimeria_chalumnae
ENSCSEG00000011209	gnl3l	99	70.669	ENSLOCG00000014702	gnl3l	98	70.497	Lepisosteus_oculatus
ENSCSEG00000011209	gnl3l	98	48.221	ENSLAFG00000016701	GNL3L	95	48.221	Loxodonta_africana
ENSCSEG00000011209	gnl3l	92	42.773	ENSMFAG00000046065	-	88	42.773	Macaca_fascicularis
ENSCSEG00000011209	gnl3l	92	51.141	ENSMFAG00000000499	GNL3L	88	51.141	Macaca_fascicularis
ENSCSEG00000011209	gnl3l	92	43.359	ENSMMUG00000044075	-	88	43.359	Macaca_mulatta
ENSCSEG00000011209	gnl3l	92	51.141	ENSMMUG00000008231	GNL3L	87	51.141	Macaca_mulatta
ENSCSEG00000011209	gnl3l	92	42.773	ENSMNEG00000031230	-	88	42.773	Macaca_nemestrina
ENSCSEG00000011209	gnl3l	92	51.141	ENSMNEG00000034813	GNL3L	88	51.141	Macaca_nemestrina
ENSCSEG00000011209	gnl3l	92	43.243	ENSMLEG00000039011	-	89	43.243	Mandrillus_leucophaeus
ENSCSEG00000011209	gnl3l	87	50.696	ENSMLEG00000029679	GNL3L	90	50.696	Mandrillus_leucophaeus
ENSCSEG00000011209	gnl3l	99	83.906	ENSMAMG00000023332	gnl3l	99	83.906	Mastacembelus_armatus
ENSCSEG00000011209	gnl3l	99	81.528	ENSMZEG00005010346	gnl3l	99	81.528	Maylandia_zebra
ENSCSEG00000011209	gnl3l	92	49.432	ENSMAUG00000013958	Gnl3l	89	49.614	Mesocricetus_auratus
ENSCSEG00000011209	gnl3l	92	50.760	ENSMICG00000010144	GNL3L	88	50.760	Microcebus_murinus
ENSCSEG00000011209	gnl3l	92	49.432	ENSMOCG00000021622	Gnl3l	88	48.767	Microtus_ochrogaster
ENSCSEG00000011209	gnl3l	91	62.963	ENSMODG00000016028	-	98	63.529	Monodelphis_domestica
ENSCSEG00000011209	gnl3l	99	81.947	ENSMALG00000007353	gnl3l	99	81.947	Monopterus_albus
ENSCSEG00000011209	gnl3l	92	50.095	MGP_CAROLIEiJ_G0033489	Gnl3l	89	50.095	Mus_caroli
ENSCSEG00000011209	gnl3l	92	50.095	ENSMUSG00000025266	Gnl3l	89	50.095	Mus_musculus
ENSCSEG00000011209	gnl3l	90	50.192	MGP_PahariEiJ_G0032028	Gnl3l	85	50.385	Mus_pahari
ENSCSEG00000011209	gnl3l	92	50.095	MGP_SPRETEiJ_G0034659	Gnl3l	89	50.095	Mus_spretus
ENSCSEG00000011209	gnl3l	92	50.192	ENSMPUG00000011421	GNL3L	89	50.192	Mustela_putorius_furo
ENSCSEG00000011209	gnl3l	92	49.526	ENSMLUG00000008331	GNL3L	89	49.526	Myotis_lucifugus
ENSCSEG00000011209	gnl3l	92	48.859	ENSNGAG00000005965	Gnl3l	85	48.859	Nannospalax_galili
ENSCSEG00000011209	gnl3l	99	83.485	ENSNBRG00000023334	gnl3l	99	83.485	Neolamprologus_brichardi
ENSCSEG00000011209	gnl3l	92	50.763	ENSNLEG00000016233	GNL3L	88	50.763	Nomascus_leucogenys
ENSCSEG00000011209	gnl3l	92	42.176	ENSNLEG00000031593	-	88	42.176	Nomascus_leucogenys
ENSCSEG00000011209	gnl3l	92	49.513	ENSODEG00000014878	-	88	49.513	Octodon_degus
ENSCSEG00000011209	gnl3l	92	49.143	ENSODEG00000007050	-	95	49.143	Octodon_degus
ENSCSEG00000011209	gnl3l	92	49.133	ENSODEG00000000662	-	90	48.940	Octodon_degus
ENSCSEG00000011209	gnl3l	92	47.438	ENSODEG00000010311	-	89	47.438	Octodon_degus
ENSCSEG00000011209	gnl3l	92	72.070	ENSOANG00000000700	-	91	72.070	Ornithorhynchus_anatinus
ENSCSEG00000011209	gnl3l	92	50.969	ENSOCUG00000007408	GNL3L	89	50.969	Oryctolagus_cuniculus
ENSCSEG00000011209	gnl3l	92	83.203	ENSORLG00000014117	gnl3l	90	83.203	Oryzias_latipes
ENSCSEG00000011209	gnl3l	99	78.571	ENSORLG00020019295	gnl3l	99	78.571	Oryzias_latipes_hni
ENSCSEG00000011209	gnl3l	99	78.571	ENSORLG00015014928	gnl3l	99	78.571	Oryzias_latipes_hsok
ENSCSEG00000011209	gnl3l	99	79.857	ENSOMEG00000023685	gnl3l	99	79.857	Oryzias_melastigma
ENSCSEG00000011209	gnl3l	92	50.680	ENSOGAG00000016754	GNL3L	89	50.680	Otolemur_garnettii
ENSCSEG00000011209	gnl3l	68	54.974	ENSOARG00000021138	-	88	54.974	Ovis_aries
ENSCSEG00000011209	gnl3l	87	39.516	ENSPPAG00000040301	-	88	39.634	Pan_paniscus
ENSCSEG00000011209	gnl3l	92	51.141	ENSPPAG00000034780	GNL3L	88	51.141	Pan_paniscus
ENSCSEG00000011209	gnl3l	92	50.382	ENSPPRG00000001783	GNL3L	88	50.382	Panthera_pardus
ENSCSEG00000011209	gnl3l	92	50.382	ENSPTIG00000007066	GNL3L	88	50.382	Panthera_tigris_altaica
ENSCSEG00000011209	gnl3l	92	51.141	ENSPTRG00000050609	GNL3L	88	51.141	Pan_troglodytes
ENSCSEG00000011209	gnl3l	87	38.020	ENSPTRG00000021940	-	88	38.124	Pan_troglodytes
ENSCSEG00000011209	gnl3l	92	42.188	ENSPANG00000032356	-	87	42.188	Papio_anubis
ENSCSEG00000011209	gnl3l	99	73.192	ENSPKIG00000012014	gnl3l	92	73.192	Paramormyrops_kingsleyae
ENSCSEG00000011209	gnl3l	98	77.982	ENSPMGG00000021338	gnl3l	97	77.982	Periophthalmus_magnuspinnatus
ENSCSEG00000011209	gnl3l	92	49.620	ENSPEMG00000012235	Gnl3l	89	49.620	Peromyscus_maniculatus_bairdii
ENSCSEG00000011209	gnl3l	92	63.372	ENSPCIG00000006327	-	91	63.372	Phascolarctos_cinereus
ENSCSEG00000011209	gnl3l	99	79.823	ENSPFOG00000007874	gnl3l	99	80.392	Poecilia_formosa
ENSCSEG00000011209	gnl3l	98	80.749	ENSPLAG00000021161	gnl3l	99	80.749	Poecilia_latipinna
ENSCSEG00000011209	gnl3l	98	80.036	ENSPMEG00000024050	gnl3l	99	80.036	Poecilia_mexicana
ENSCSEG00000011209	gnl3l	88	83.570	ENSPREG00000021994	gnl3l	88	83.570	Poecilia_reticulata
ENSCSEG00000011209	gnl3l	92	51.257	ENSPPYG00000020383	GNL3L	98	51.556	Pongo_abelii
ENSCSEG00000011209	gnl3l	68	49.734	ENSPCAG00000005304	GNL3L	65	49.734	Procavia_capensis
ENSCSEG00000011209	gnl3l	92	50.954	ENSPCOG00000016430	GNL3L	88	50.575	Propithecus_coquereli
ENSCSEG00000011209	gnl3l	71	49.261	ENSPVAG00000008758	GNL3L	69	49.261	Pteropus_vampyrus
ENSCSEG00000011209	gnl3l	99	81.350	ENSPNYG00000017256	gnl3l	99	81.350	Pundamilia_nyererei
ENSCSEG00000011209	gnl3l	99	73.192	ENSPNAG00000005179	gnl3l	95	73.675	Pygocentrus_nattereri
ENSCSEG00000011209	gnl3l	92	50.095	ENSRNOG00000002509	Gnl3l	89	50.095	Rattus_norvegicus
ENSCSEG00000011209	gnl3l	92	50.951	ENSRBIG00000041351	GNL3L	88	50.951	Rhinopithecus_bieti
ENSCSEG00000011209	gnl3l	92	50.951	ENSRROG00000036933	GNL3L	88	50.951	Rhinopithecus_roxellana
ENSCSEG00000011209	gnl3l	92	50.760	ENSSBOG00000007626	-	98	51.052	Saimiri_boliviensis_boliviensis
ENSCSEG00000011209	gnl3l	99	74.382	ENSSFOG00015008883	gnl3l	99	74.382	Scleropages_formosus
ENSCSEG00000011209	gnl3l	99	81.625	ENSSMAG00000014518	gnl3l	99	81.625	Scophthalmus_maximus
ENSCSEG00000011209	gnl3l	99	82.686	ENSSDUG00000013117	gnl3l	99	82.686	Seriola_dumerili
ENSCSEG00000011209	gnl3l	99	83.039	ENSSLDG00000012278	gnl3l	99	85.905	Seriola_lalandi_dorsalis
ENSCSEG00000011209	gnl3l	57	64.015	ENSSARG00000005360	GNL3L	57	64.015	Sorex_araneus
ENSCSEG00000011209	gnl3l	99	82.655	ENSSPAG00000021373	gnl3l	94	82.655	Stegastes_partitus
ENSCSEG00000011209	gnl3l	92	50.570	ENSSSCG00000012336	GNL3L	95	50.570	Sus_scrofa
ENSCSEG00000011209	gnl3l	98	78.712	ENSTRUG00000013131	gnl3l	99	78.712	Takifugu_rubripes
ENSCSEG00000011209	gnl3l	98	79.144	ENSTNIG00000007323	gnl3l	98	79.144	Tetraodon_nigroviridis
ENSCSEG00000011209	gnl3l	92	48.828	ENSTTRG00000000881	GNL3L	88	48.828	Tursiops_truncatus
ENSCSEG00000011209	gnl3l	74	55.825	ENSUAMG00000009526	GNL3L	78	59.189	Ursus_americanus
ENSCSEG00000011209	gnl3l	92	50.190	ENSUMAG00000019089	GNL3L	89	50.190	Ursus_maritimus
ENSCSEG00000011209	gnl3l	92	50.382	ENSVVUG00000002172	GNL3L	83	50.382	Vulpes_vulpes
ENSCSEG00000011209	gnl3l	92	62.913	ENSXETG00000007700	gnl3l	89	62.913	Xenopus_tropicalis
ENSCSEG00000011209	gnl3l	99	81.752	ENSXCOG00000011839	gnl3l	99	81.752	Xiphophorus_couchianus
ENSCSEG00000011209	gnl3l	98	80.714	ENSXMAG00000007665	gnl3l	99	80.714	Xiphophorus_maculatus