EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000011306 (Gene tree)
Gene ID: 103376970
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 7046 bases
Position: chr3:5340332-5347377
Accession: 103376970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017630	zf-RanBP	PF00641.18	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000017849	-	2106	XM_008307561	ENSCSEP00000017630	701 (aa)	XP_008305783	-

Gene Model

Click here to download ENSCSEG00000011306's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04217	Necroptosis	KEGG
csem04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011306	shrprbck1r	100	78.911	ENSAPOG00000022737	shrprbck1r	100	78.352	Acanthochromis_polyacanthus
ENSCSEG00000011306	shrprbck1r	59	52.304	ENSAPOG00000023352	sharpin	95	51.152	Acanthochromis_polyacanthus
ENSCSEG00000011306	shrprbck1r	100	76.056	ENSACIG00000002184	shrprbck1r	100	76.056	Amphilophus_citrinellus
ENSCSEG00000011306	shrprbck1r	59	52.083	ENSAOCG00000017464	sharpin	95	50.926	Amphiprion_ocellaris
ENSCSEG00000011306	shrprbck1r	100	78.291	ENSAOCG00000002890	shrprbck1r	100	77.871	Amphiprion_ocellaris
ENSCSEG00000011306	shrprbck1r	100	79.296	ENSAPEG00000023274	shrprbck1r	100	78.873	Amphiprion_percula
ENSCSEG00000011306	shrprbck1r	59	52.083	ENSAPEG00000004049	sharpin	95	50.926	Amphiprion_percula
ENSCSEG00000011306	shrprbck1r	100	78.977	ENSATEG00000014561	shrprbck1r	100	78.977	Anabas_testudineus
ENSCSEG00000011306	shrprbck1r	59	53.241	ENSATEG00000007832	sharpin	88	52.083	Anabas_testudineus
ENSCSEG00000011306	shrprbck1r	100	77.131	ENSACLG00000022609	shrprbck1r	100	77.131	Astatotilapia_calliptera
ENSCSEG00000011306	shrprbck1r	53	54.211	ENSAMXG00000006229	sharpin	96	54.211	Astyanax_mexicanus
ENSCSEG00000011306	shrprbck1r	100	66.303	ENSAMXG00000021016	shrprbck1r	100	66.758	Astyanax_mexicanus
ENSCSEG00000011306	shrprbck1r	59	50.930	ENSCVAG00000006586	sharpin	95	49.302	Cyprinodon_variegatus
ENSCSEG00000011306	shrprbck1r	100	72.893	ENSCVAG00000007250	shrprbck1r	100	72.612	Cyprinodon_variegatus
ENSCSEG00000011306	shrprbck1r	100	68.465	ENSDARG00000059871	shrprbck1r	100	69.156	Danio_rerio
ENSCSEG00000011306	shrprbck1r	54	53.109	ENSDARG00000076995	sharpin	94	52.850	Danio_rerio
ENSCSEG00000011306	shrprbck1r	100	70.376	ENSELUG00000016022	shrprbck1r	100	70.376	Esox_lucius
ENSCSEG00000011306	shrprbck1r	59	51.748	ENSFHEG00000013564	sharpin	94	51.049	Fundulus_heteroclitus
ENSCSEG00000011306	shrprbck1r	50	58.735	ENSGMOG00000010123	sharpin	91	58.735	Gadus_morhua
ENSCSEG00000011306	shrprbck1r	100	71.932	ENSGAFG00000009309	shrprbck1r	100	71.650	Gambusia_affinis
ENSCSEG00000011306	shrprbck1r	59	41.667	ENSGAFG00000021405	sharpin	95	40.952	Gambusia_affinis
ENSCSEG00000011306	shrprbck1r	76	78.679	ENSGACG00000002544	shrprbck1r	100	78.679	Gasterosteus_aculeatus
ENSCSEG00000011306	shrprbck1r	100	75.661	ENSHBUG00000021933	shrprbck1r	100	75.661	Haplochromis_burtoni
ENSCSEG00000011306	shrprbck1r	59	51.790	ENSHCOG00000018847	sharpin	80	50.827	Hippocampus_comes
ENSCSEG00000011306	shrprbck1r	54	55.614	ENSIPUG00000011951	sharpin	99	55.091	Ictalurus_punctatus
ENSCSEG00000011306	shrprbck1r	96	65.130	ENSIPUG00000014247	shrprbck1r	98	63.268	Ictalurus_punctatus
ENSCSEG00000011306	shrprbck1r	59	52.941	ENSKMAG00000015204	sharpin	76	51.765	Kryptolebias_marmoratus
ENSCSEG00000011306	shrprbck1r	100	75.035	ENSKMAG00000015215	shrprbck1r	100	75.035	Kryptolebias_marmoratus
ENSCSEG00000011306	shrprbck1r	59	53.687	ENSLBEG00000016624	sharpin	96	52.304	Labrus_bergylta
ENSCSEG00000011306	shrprbck1r	100	78.511	ENSLBEG00000016876	shrprbck1r	100	78.511	Labrus_bergylta
ENSCSEG00000011306	shrprbck1r	95	51.895	ENSLACG00000010948	-	96	51.749	Latimeria_chalumnae
ENSCSEG00000011306	shrprbck1r	100	65.655	ENSLOCG00000008910	shrprbck1r	100	66.343	Lepisosteus_oculatus
ENSCSEG00000011306	shrprbck1r	100	76.879	ENSMAMG00000022930	shrprbck1r	100	76.879	Mastacembelus_armatus
ENSCSEG00000011306	shrprbck1r	50	67.742	ENSMAMG00000014645	sharpin	92	67.742	Mastacembelus_armatus
ENSCSEG00000011306	shrprbck1r	100	75.382	ENSMZEG00005021257	shrprbck1r	100	75.382	Maylandia_zebra
ENSCSEG00000011306	shrprbck1r	50	52.830	ENSMMOG00000016788	sharpin	91	47.368	Mola_mola
ENSCSEG00000011306	shrprbck1r	100	75.070	ENSMMOG00000003764	shrprbck1r	100	75.070	Mola_mola
ENSCSEG00000011306	shrprbck1r	95	77.794	ENSMALG00000008861	shrprbck1r	96	77.471	Monopterus_albus
ENSCSEG00000011306	shrprbck1r	50	67.742	ENSMALG00000020528	sharpin	93	67.742	Monopterus_albus
ENSCSEG00000011306	shrprbck1r	100	76.264	ENSNBRG00000002270	shrprbck1r	100	76.264	Neolamprologus_brichardi
ENSCSEG00000011306	shrprbck1r	100	75.882	ENSONIG00000014401	shrprbck1r	100	75.882	Oreochromis_niloticus
ENSCSEG00000011306	shrprbck1r	54	52.451	ENSONIG00000009626	-	97	50.980	Oreochromis_niloticus
ENSCSEG00000011306	shrprbck1r	59	52.103	ENSORLG00000017281	sharpin	95	50.935	Oryzias_latipes
ENSCSEG00000011306	shrprbck1r	100	74.579	ENSORLG00000007392	shrprbck1r	100	74.438	Oryzias_latipes
ENSCSEG00000011306	shrprbck1r	59	51.869	ENSORLG00020000801	sharpin	95	50.467	Oryzias_latipes_hni
ENSCSEG00000011306	shrprbck1r	100	74.579	ENSORLG00020018619	shrprbck1r	100	74.438	Oryzias_latipes_hni
ENSCSEG00000011306	shrprbck1r	59	51.869	ENSORLG00015009860	sharpin	95	50.701	Oryzias_latipes_hsok
ENSCSEG00000011306	shrprbck1r	100	74.438	ENSORLG00015018865	shrprbck1r	100	74.298	Oryzias_latipes_hsok
ENSCSEG00000011306	shrprbck1r	100	74.438	ENSOMEG00000012749	shrprbck1r	100	74.157	Oryzias_melastigma
ENSCSEG00000011306	shrprbck1r	65	54.661	ENSPKIG00000018308	-	96	54.641	Paramormyrops_kingsleyae
ENSCSEG00000011306	shrprbck1r	100	67.872	ENSPKIG00000006933	shrprbck1r	100	68.150	Paramormyrops_kingsleyae
ENSCSEG00000011306	shrprbck1r	100	74.363	ENSPMGG00000013254	shrprbck1r	100	74.363	Periophthalmus_magnuspinnatus
ENSCSEG00000011306	shrprbck1r	59	50.350	ENSPFOG00000015253	sharpin	95	50.350	Poecilia_formosa
ENSCSEG00000011306	shrprbck1r	100	72.230	ENSPFOG00000004214	shrprbck1r	100	71.950	Poecilia_formosa
ENSCSEG00000011306	shrprbck1r	59	50.583	ENSPLAG00000000423	sharpin	95	50.583	Poecilia_latipinna
ENSCSEG00000011306	shrprbck1r	100	72.090	ENSPLAG00000020523	shrprbck1r	100	71.809	Poecilia_latipinna
ENSCSEG00000011306	shrprbck1r	100	72.920	ENSPMEG00000006877	shrprbck1r	100	72.638	Poecilia_mexicana
ENSCSEG00000011306	shrprbck1r	59	41.646	ENSPMEG00000023030	sharpin	89	41.404	Poecilia_mexicana
ENSCSEG00000011306	shrprbck1r	100	72.521	ENSPREG00000014689	shrprbck1r	100	72.238	Poecilia_reticulata
ENSCSEG00000011306	shrprbck1r	59	50.465	ENSPREG00000009702	sharpin	95	50.465	Poecilia_reticulata
ENSCSEG00000011306	shrprbck1r	100	75.800	ENSPNYG00000022601	shrprbck1r	100	75.800	Pundamilia_nyererei
ENSCSEG00000011306	shrprbck1r	100	65.390	ENSPNAG00000007847	shrprbck1r	100	65.253	Pygocentrus_nattereri
ENSCSEG00000011306	shrprbck1r	54	53.457	ENSPNAG00000002911	sharpin	99	52.785	Pygocentrus_nattereri
ENSCSEG00000011306	shrprbck1r	77	61.510	ENSSFOG00015014150	-	99	61.142	Scleropages_formosus
ENSCSEG00000011306	shrprbck1r	62	50.820	ENSSFOG00015004028	sharpin	99	50.101	Scleropages_formosus
ENSCSEG00000011306	shrprbck1r	100	79.190	ENSSMAG00000018085	shrprbck1r	100	79.190	Scophthalmus_maximus
ENSCSEG00000011306	shrprbck1r	100	81.215	ENSSDUG00000002959	shrprbck1r	100	81.215	Seriola_dumerili
ENSCSEG00000011306	shrprbck1r	60	41.458	ENSSDUG00000019039	sharpin	96	40.091	Seriola_dumerili
ENSCSEG00000011306	shrprbck1r	100	81.013	ENSSLDG00000009026	shrprbck1r	100	81.013	Seriola_lalandi_dorsalis
ENSCSEG00000011306	shrprbck1r	96	78.655	ENSSPAG00000016097	shrprbck1r	99	77.924	Stegastes_partitus
ENSCSEG00000011306	shrprbck1r	59	49.292	ENSTRUG00000011046	sharpin	96	48.826	Takifugu_rubripes
ENSCSEG00000011306	shrprbck1r	100	75.813	ENSTRUG00000006949	shrprbck1r	100	75.813	Takifugu_rubripes
ENSCSEG00000011306	shrprbck1r	54	52.750	ENSTNIG00000008521	sharpin	94	51.500	Tetraodon_nigroviridis
ENSCSEG00000011306	shrprbck1r	59	41.727	ENSXCOG00000015019	sharpin	96	54.167	Xiphophorus_couchianus
ENSCSEG00000011306	shrprbck1r	100	72.159	ENSXCOG00000006701	shrprbck1r	100	71.875	Xiphophorus_couchianus
ENSCSEG00000011306	shrprbck1r	100	72.159	ENSXMAG00000018972	shrprbck1r	100	71.875	Xiphophorus_maculatus
ENSCSEG00000011306	shrprbck1r	59	50.816	ENSXMAG00000022076	sharpin	95	50.816	Xiphophorus_maculatus