EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011533 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6188 bases
Position: chrW:7682245-7688432
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000017998	KH_1	PF00013.29	5.7e-16	1	1
ENSCSEP00000017994	KH_1	PF00013.29	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018215	-	1971	-	ENSCSEP00000017994	656 (aa)	-	-
ENSCSET00000018219	-	1413	-	ENSCSEP00000017998	470 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000011533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011533	-	86	76.645	ENSCSEG00000006809	-	90	78.094
ENSCSEG00000011533	-	61	60.870	ENSCSEG00000005852	mex3b	56	60.714
ENSCSEG00000011533	-	88	47.204	ENSCSEG00000014157	MEX3D	93	46.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011533	-	91	50.870	ENSAPOG00000006457	mex3b	99	49.123	Acanthochromis_polyacanthus
ENSCSEG00000011533	-	99	66.667	ENSAPOG00000024248	-	100	66.476	Acanthochromis_polyacanthus
ENSCSEG00000011533	-	58	67.083	ENSAMEG00000006037	MEX3B	52	71.759	Ailuropoda_melanoleuca
ENSCSEG00000011533	-	88	49.227	ENSACIG00000017783	mex3b	89	49.550	Amphilophus_citrinellus
ENSCSEG00000011533	-	96	69.753	ENSACIG00000005655	-	97	65.714	Amphilophus_citrinellus
ENSCSEG00000011533	-	99	66.487	ENSAOCG00000021347	-	100	66.189	Amphiprion_ocellaris
ENSCSEG00000011533	-	93	50.106	ENSAOCG00000023903	mex3b	91	48.504	Amphiprion_ocellaris
ENSCSEG00000011533	-	93	50.426	ENSAPEG00000000263	mex3b	91	48.498	Amphiprion_percula
ENSCSEG00000011533	-	99	66.068	ENSAPEG00000003579	-	100	66.046	Amphiprion_percula
ENSCSEG00000011533	-	68	68.559	ENSATEG00000012352	mex3b	51	68.860	Anabas_testudineus
ENSCSEG00000011533	-	99	66.367	ENSATEG00000015187	-	100	65.186	Anabas_testudineus
ENSCSEG00000011533	-	99	64.964	ENSACLG00000017634	-	100	62.229	Astatotilapia_calliptera
ENSCSEG00000011533	-	60	61.832	ENSACLG00000025776	mex3b	50	68.421	Astatotilapia_calliptera
ENSCSEG00000011533	-	70	67.782	ENSAMXG00000033615	mex3b	66	67.647	Astyanax_mexicanus
ENSCSEG00000011533	-	53	70.968	ENSCJAG00000008043	MEX3B	52	63.462	Callithrix_jacchus
ENSCSEG00000011533	-	53	73.786	ENSCSAG00000015153	MEX3B	52	65.200	Chlorocebus_sabaeus
ENSCSEG00000011533	-	99	62.956	ENSCVAG00000006043	-	99	61.905	Cyprinodon_variegatus
ENSCSEG00000011533	-	90	46.471	ENSDARG00000058369	mex3b	53	67.797	Danio_rerio
ENSCSEG00000011533	-	53	73.430	ENSDNOG00000043628	MEX3B	52	64.567	Dasypus_novemcinctus
ENSCSEG00000011533	-	77	67.805	ENSEBUG00000007080	mex3b	88	48.366	Eptatretus_burgeri
ENSCSEG00000011533	-	65	71.292	ENSEBUG00000013015	mex3b	56	71.905	Eptatretus_burgeri
ENSCSEG00000011533	-	53	73.786	ENSFDAG00000018452	MEX3B	66	71.759	Fukomys_damarensis
ENSCSEG00000011533	-	99	66.485	ENSFHEG00000022740	-	99	66.864	Fundulus_heteroclitus
ENSCSEG00000011533	-	88	59.465	ENSGMOG00000005826	-	100	60.941	Gadus_morhua
ENSCSEG00000011533	-	90	62.115	ENSGAFG00000013694	-	98	62.595	Gambusia_affinis
ENSCSEG00000011533	-	88	63.601	ENSGACG00000007490	-	100	64.397	Gasterosteus_aculeatus
ENSCSEG00000011533	-	96	41.905	ENSGACG00000012530	mex3b	58	62.083	Gasterosteus_aculeatus
ENSCSEG00000011533	-	53	73.786	ENSGGOG00000000597	MEX3B	52	65.462	Gorilla_gorilla
ENSCSEG00000011533	-	61	61.832	ENSHBUG00000022683	mex3b	51	68.421	Haplochromis_burtoni
ENSCSEG00000011533	-	99	64.964	ENSHBUG00000010552	-	100	62.899	Haplochromis_burtoni
ENSCSEG00000011533	-	99	55.849	ENSHCOG00000010812	-	98	58.113	Hippocampus_comes
ENSCSEG00000011533	-	92	46.429	ENSHCOG00000007290	mex3b	93	46.888	Hippocampus_comes
ENSCSEG00000011533	-	100	63.262	ENSKMAG00000021181	MEX3B	99	62.251	Kryptolebias_marmoratus
ENSCSEG00000011533	-	79	64.130	ENSLBEG00000007607	-	88	62.944	Labrus_bergylta
ENSCSEG00000011533	-	88	48.428	ENSLBEG00000015131	mex3b	94	50.000	Labrus_bergylta
ENSCSEG00000011533	-	64	73.301	ENSLACG00000015887	MEX3B	62	73.301	Latimeria_chalumnae
ENSCSEG00000011533	-	90	45.720	ENSLOCG00000012858	mex3b	52	67.797	Lepisosteus_oculatus
ENSCSEG00000011533	-	65	67.699	ENSLAFG00000006027	MEX3B	95	75.253	Loxodonta_africana
ENSCSEG00000011533	-	53	73.786	ENSMFAG00000037608	MEX3B	51	65.462	Macaca_fascicularis
ENSCSEG00000011533	-	53	73.786	ENSMNEG00000043420	MEX3B	51	65.462	Macaca_nemestrina
ENSCSEG00000011533	-	68	68.122	ENSMAMG00000011325	mex3b	52	68.421	Mastacembelus_armatus
ENSCSEG00000011533	-	99	63.826	ENSMAMG00000001370	-	100	63.510	Mastacembelus_armatus
ENSCSEG00000011533	-	61	61.832	ENSMZEG00005003082	mex3b	51	68.421	Maylandia_zebra
ENSCSEG00000011533	-	99	64.964	ENSMZEG00005004908	-	100	62.229	Maylandia_zebra
ENSCSEG00000011533	-	53	73.786	ENSMAUG00000001211	Mex3b	51	65.462	Mesocricetus_auratus
ENSCSEG00000011533	-	99	65.953	ENSMMOG00000000120	-	100	66.667	Mola_mola
ENSCSEG00000011533	-	85	64.119	ENSMALG00000009589	-	92	64.098	Monopterus_albus
ENSCSEG00000011533	-	99	66.403	ENSNBRG00000012485	-	98	65.294	Neolamprologus_brichardi
ENSCSEG00000011533	-	61	61.832	ENSNBRG00000000526	mex3b	50	68.421	Neolamprologus_brichardi
ENSCSEG00000011533	-	53	69.565	ENSNLEG00000036285	MEX3B	51	60.618	Nomascus_leucogenys
ENSCSEG00000011533	-	99	65.085	ENSONIG00000015037	-	100	66.667	Oreochromis_niloticus
ENSCSEG00000011533	-	61	61.832	ENSONIG00000003391	mex3b	51	68.421	Oreochromis_niloticus
ENSCSEG00000011533	-	99	64.029	ENSORLG00000004985	-	100	63.271	Oryzias_latipes
ENSCSEG00000011533	-	99	65.225	ENSORLG00020020174	-	100	64.265	Oryzias_latipes_hni
ENSCSEG00000011533	-	99	64.144	ENSORLG00015008649	-	100	64.265	Oryzias_latipes_hsok
ENSCSEG00000011533	-	99	66.787	ENSOMEG00000023339	-	100	65.512	Oryzias_melastigma
ENSCSEG00000011533	-	53	73.786	ENSOGAG00000029664	MEX3B	53	64.202	Otolemur_garnettii
ENSCSEG00000011533	-	53	66.981	ENSOARG00000014515	MEX3B	61	66.981	Ovis_aries
ENSCSEG00000011533	-	53	73.786	ENSPPAG00000020407	MEX3B	52	65.462	Pan_paniscus
ENSCSEG00000011533	-	53	73.786	ENSPTRG00000007373	MEX3B	51	65.462	Pan_troglodytes
ENSCSEG00000011533	-	88	48.330	ENSPKIG00000019969	-	95	49.103	Paramormyrops_kingsleyae
ENSCSEG00000011533	-	90	45.473	ENSPSIG00000007979	MEX3B	90	46.012	Pelodiscus_sinensis
ENSCSEG00000011533	-	98	62.400	ENSPMGG00000017559	-	98	59.555	Periophthalmus_magnuspinnatus
ENSCSEG00000011533	-	61	61.923	ENSPMGG00000015808	mex3b	98	45.261	Periophthalmus_magnuspinnatus
ENSCSEG00000011533	-	87	40.514	ENSPMAG00000000125	mex3b	99	39.044	Petromyzon_marinus
ENSCSEG00000011533	-	99	65.844	ENSPFOG00000018999	-	100	65.938	Poecilia_formosa
ENSCSEG00000011533	-	99	64.388	ENSPLAG00000002303	-	99	65.226	Poecilia_latipinna
ENSCSEG00000011533	-	99	63.722	ENSPMEG00000006448	-	99	64.368	Poecilia_mexicana
ENSCSEG00000011533	-	99	63.196	ENSPREG00000018559	-	99	64.132	Poecilia_reticulata
ENSCSEG00000011533	-	99	64.781	ENSPNYG00000010418	-	100	62.754	Pundamilia_nyererei
ENSCSEG00000011533	-	61	61.832	ENSPNYG00000019384	mex3b	50	68.421	Pundamilia_nyererei
ENSCSEG00000011533	-	88	50.444	ENSPNAG00000002109	mex3b	93	48.884	Pygocentrus_nattereri
ENSCSEG00000011533	-	53	73.786	ENSRNOG00000025142	Mex3b	51	65.462	Rattus_norvegicus
ENSCSEG00000011533	-	90	49.448	ENSSFOG00015016308	mex3b	92	50.439	Scleropages_formosus
ENSCSEG00000011533	-	98	41.982	ENSSMAG00000017078	mex3b	60	58.696	Scophthalmus_maximus
ENSCSEG00000011533	-	84	69.635	ENSSMAG00000001075	-	100	68.958	Scophthalmus_maximus
ENSCSEG00000011533	-	99	68.817	ENSSDUG00000022255	-	100	69.757	Seriola_dumerili
ENSCSEG00000011533	-	62	61.832	ENSSDUG00000013254	mex3b	51	68.421	Seriola_dumerili
ENSCSEG00000011533	-	99	68.571	ENSSLDG00000024917	-	100	69.034	Seriola_lalandi_dorsalis
ENSCSEG00000011533	-	62	61.832	ENSSLDG00000014620	mex3b	51	68.421	Seriola_lalandi_dorsalis
ENSCSEG00000011533	-	88	53.456	ENSSPAG00000011854	mex3b	90	50.457	Stegastes_partitus
ENSCSEG00000011533	-	91	64.353	ENSSPAG00000002581	-	96	64.723	Stegastes_partitus
ENSCSEG00000011533	-	88	49.345	ENSTRUG00000000367	mex3b	92	49.020	Takifugu_rubripes
ENSCSEG00000011533	-	99	63.511	ENSTRUG00000011888	-	100	61.295	Takifugu_rubripes
ENSCSEG00000011533	-	88	49.892	ENSTNIG00000003398	mex3b	68	68.421	Tetraodon_nigroviridis
ENSCSEG00000011533	-	90	48.932	ENSXETG00000027601	mex3b	90	48.195	Xenopus_tropicalis
ENSCSEG00000011533	-	77	63.659	ENSXCOG00000005190	-	97	65.063	Xiphophorus_couchianus
ENSCSEG00000011533	-	99	64.928	ENSXMAG00000015283	-	99	64.460	Xiphophorus_maculatus