EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000011599 (Gene tree)
Gene ID: 103392106
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3860 bases
Position: chr16:11322288-11326147
Accession: 103392106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018077	RRM_1	PF00076.22	1.6e-10	1	1
ENSCSEP00000018077	RRM_3	PF08777.11	4.2e-28	1	1
ENSCSEP00000018077	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018298	-	1277	XM_008328646	ENSCSEP00000018077	399 (aa)	XP_008326868	UPI0004986A90

Gene Model

Click here to download ENSCSEG00000011599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011599	ssb	99	56.576	ENSG00000138385	SSB	98	62.712	Homo_sapiens
ENSCSEG00000011599	ssb	100	83.459	ENSAPOG00000003448	ssb	100	83.960	Acanthochromis_polyacanthus
ENSCSEG00000011599	ssb	99	55.206	ENSAMEG00000010507	SSB	98	55.206	Ailuropoda_melanoleuca
ENSCSEG00000011599	ssb	92	79.891	ENSACIG00000001738	ssb	96	79.348	Amphilophus_citrinellus
ENSCSEG00000011599	ssb	100	84.962	ENSAOCG00000020398	ssb	100	85.464	Amphiprion_ocellaris
ENSCSEG00000011599	ssb	100	84.962	ENSAPEG00000020395	ssb	100	85.464	Amphiprion_percula
ENSCSEG00000011599	ssb	99	84.422	ENSATEG00000016884	ssb	99	84.422	Anabas_testudineus
ENSCSEG00000011599	ssb	99	53.125	ENSAPLG00000006109	SSB	97	53.511	Anas_platyrhynchos
ENSCSEG00000011599	ssb	98	54.975	ENSACAG00000017008	SSB	97	54.726	Anolis_carolinensis
ENSCSEG00000011599	ssb	99	52.000	ENSANAG00000027195	-	98	50.750	Aotus_nancymaae
ENSCSEG00000011599	ssb	99	76.942	ENSACLG00000010798	ssb	99	76.190	Astatotilapia_calliptera
ENSCSEG00000011599	ssb	100	59.169	ENSAMXG00000012606	ssb	100	60.147	Astyanax_mexicanus
ENSCSEG00000011599	ssb	99	57.895	ENSBTAG00000008716	SSB	98	57.143	Bos_taurus
ENSCSEG00000011599	ssb	75	35.948	WBGene00016653	C44E4.4	76	35.948	Caenorhabditis_elegans
ENSCSEG00000011599	ssb	99	57.500	ENSCJAG00000045073	SSB	98	57.000	Callithrix_jacchus
ENSCSEG00000011599	ssb	99	57.107	ENSCAFG00000012418	SSB	98	56.359	Canis_familiaris
ENSCSEG00000011599	ssb	99	57.107	ENSCAFG00020002900	SSB	98	56.359	Canis_lupus_dingo
ENSCSEG00000011599	ssb	99	58.000	ENSCHIG00000022624	-	98	57.250	Capra_hircus
ENSCSEG00000011599	ssb	99	55.000	ENSCHIG00000022196	-	98	54.250	Capra_hircus
ENSCSEG00000011599	ssb	99	57.644	ENSTSYG00000000097	SSB	98	56.892	Carlito_syrichta
ENSCSEG00000011599	ssb	99	58.000	ENSCPOG00000003338	SSB	98	57.250	Cavia_porcellus
ENSCSEG00000011599	ssb	99	57.250	ENSCCAG00000035147	SSB	98	56.750	Cebus_capucinus
ENSCSEG00000011599	ssb	72	53.952	ENSCATG00000036701	SSB	83	53.608	Cercocebus_atys
ENSCSEG00000011599	ssb	99	43.000	ENSCATG00000042909	-	97	42.500	Cercocebus_atys
ENSCSEG00000011599	ssb	99	58.250	ENSCLAG00000015617	-	98	57.500	Chinchilla_lanigera
ENSCSEG00000011599	ssb	97	51.662	ENSCSAG00000018390	-	98	51.151	Chlorocebus_sabaeus
ENSCSEG00000011599	ssb	99	57.393	ENSCSAG00000015200	SSB	87	57.143	Chlorocebus_sabaeus
ENSCSEG00000011599	ssb	99	58.250	ENSCHOG00000007763	SSB	98	57.500	Choloepus_hoffmanni
ENSCSEG00000011599	ssb	99	57.072	ENSCPBG00000006519	SSB	97	58.354	Chrysemys_picta_bellii
ENSCSEG00000011599	ssb	96	45.455	ENSCANG00000028838	-	91	45.195	Colobus_angolensis_palliatus
ENSCSEG00000011599	ssb	99	57.250	ENSCANG00000027695	SSB	98	56.750	Colobus_angolensis_palliatus
ENSCSEG00000011599	ssb	99	49.373	ENSCANG00000033240	-	98	49.123	Colobus_angolensis_palliatus
ENSCSEG00000011599	ssb	99	52.868	ENSCGRG00001024831	Ssb	98	53.367	Cricetulus_griseus_chok1gshd
ENSCSEG00000011599	ssb	99	52.868	ENSCGRG00000005387	Ssb	98	53.367	Cricetulus_griseus_crigri
ENSCSEG00000011599	ssb	99	78.446	ENSCVAG00000021558	ssb	99	79.198	Cyprinodon_variegatus
ENSCSEG00000011599	ssb	100	63.614	ENSDARG00000029252	ssb	100	63.547	Danio_rerio
ENSCSEG00000011599	ssb	99	58.500	ENSDNOG00000013450	SSB	98	57.750	Dasypus_novemcinctus
ENSCSEG00000011599	ssb	99	53.865	ENSDORG00000005543	Ssb	98	53.865	Dipodomys_ordii
ENSCSEG00000011599	ssb	85	35.028	FBgn0011638	La	80	36.061	Drosophila_melanogaster
ENSCSEG00000011599	ssb	51	63.366	ENSETEG00000004614	-	52	63.366	Echinops_telfairi
ENSCSEG00000011599	ssb	98	44.133	ENSEBUG00000001237	ssb	96	43.112	Eptatretus_burgeri
ENSCSEG00000011599	ssb	99	58.000	ENSEASG00005022835	SSB	98	57.250	Equus_asinus_asinus
ENSCSEG00000011599	ssb	99	58.000	ENSECAG00000018495	SSB	98	57.250	Equus_caballus
ENSCSEG00000011599	ssb	75	49.669	ENSEEUG00000008077	SSB	76	49.669	Erinaceus_europaeus
ENSCSEG00000011599	ssb	100	68.069	ENSELUG00000020929	ssb	100	70.545	Esox_lucius
ENSCSEG00000011599	ssb	99	58.105	ENSFCAG00000011601	SSB	98	57.357	Felis_catus
ENSCSEG00000011599	ssb	99	56.250	ENSFALG00000000930	SSB	97	56.281	Ficedula_albicollis
ENSCSEG00000011599	ssb	99	58.000	ENSFDAG00000000598	SSB	98	57.250	Fukomys_damarensis
ENSCSEG00000011599	ssb	74	79.470	ENSFHEG00000003268	ssb	94	78.361	Fundulus_heteroclitus
ENSCSEG00000011599	ssb	99	73.383	ENSGMOG00000002664	ssb	100	73.383	Gadus_morhua
ENSCSEG00000011599	ssb	99	56.359	ENSGALG00000009677	SSB	97	55.138	Gallus_gallus
ENSCSEG00000011599	ssb	99	81.108	ENSGAFG00000002749	ssb	99	81.407	Gambusia_affinis
ENSCSEG00000011599	ssb	99	78.465	ENSGACG00000005107	ssb	99	78.465	Gasterosteus_aculeatus
ENSCSEG00000011599	ssb	99	56.824	ENSGAGG00000007807	SSB	98	57.816	Gopherus_agassizii
ENSCSEG00000011599	ssb	99	47.500	ENSGGOG00000024891	-	98	47.500	Gorilla_gorilla
ENSCSEG00000011599	ssb	54	53.812	ENSGGOG00000023471	-	90	52.915	Gorilla_gorilla
ENSCSEG00000011599	ssb	99	75.940	ENSHBUG00000006584	ssb	99	75.188	Haplochromis_burtoni
ENSCSEG00000011599	ssb	99	51.637	ENSHGLG00000005832	-	98	50.882	Heterocephalus_glaber_female
ENSCSEG00000011599	ssb	99	52.985	ENSHGLG00000004478	-	98	52.239	Heterocephalus_glaber_female
ENSCSEG00000011599	ssb	99	57.389	ENSHGLG00000017580	-	98	57.037	Heterocephalus_glaber_female
ENSCSEG00000011599	ssb	99	52.750	ENSHGLG00100008767	-	98	52.000	Heterocephalus_glaber_male
ENSCSEG00000011599	ssb	99	57.389	ENSHGLG00100003084	-	98	57.037	Heterocephalus_glaber_male
ENSCSEG00000011599	ssb	99	76.574	ENSHCOG00000019011	ssb	99	76.515	Hippocampus_comes
ENSCSEG00000011599	ssb	100	61.707	ENSIPUG00000003681	SSB	100	61.707	Ictalurus_punctatus
ENSCSEG00000011599	ssb	99	57.750	ENSSTOG00000008416	SSB	98	57.000	Ictidomys_tridecemlineatus
ENSCSEG00000011599	ssb	89	47.238	ENSJJAG00000016250	-	94	46.961	Jaculus_jaculus
ENSCSEG00000011599	ssb	99	52.392	ENSJJAG00000023158	-	98	52.038	Jaculus_jaculus
ENSCSEG00000011599	ssb	99	83.166	ENSKMAG00000017317	ssb	99	83.166	Kryptolebias_marmoratus
ENSCSEG00000011599	ssb	100	83.459	ENSLBEG00000017345	ssb	100	83.459	Labrus_bergylta
ENSCSEG00000011599	ssb	99	54.613	ENSLACG00000014056	SSB	97	54.863	Latimeria_chalumnae
ENSCSEG00000011599	ssb	99	64.198	ENSLOCG00000007933	ssb	99	64.198	Lepisosteus_oculatus
ENSCSEG00000011599	ssb	99	53.865	ENSLAFG00000000867	-	98	54.348	Loxodonta_africana
ENSCSEG00000011599	ssb	99	50.251	ENSLAFG00000028909	-	97	49.246	Loxodonta_africana
ENSCSEG00000011599	ssb	74	44.746	ENSLAFG00000026721	-	98	44.000	Loxodonta_africana
ENSCSEG00000011599	ssb	99	57.250	ENSMFAG00000039066	SSB	98	56.750	Macaca_fascicularis
ENSCSEG00000011599	ssb	89	48.732	ENSMFAG00000041478	-	88	51.713	Macaca_fascicularis
ENSCSEG00000011599	ssb	99	48.500	ENSMMUG00000011724	-	95	48.000	Macaca_mulatta
ENSCSEG00000011599	ssb	99	57.250	ENSMMUG00000023051	SSB	98	56.750	Macaca_mulatta
ENSCSEG00000011599	ssb	99	42.000	ENSMMUG00000039889	-	98	41.500	Macaca_mulatta
ENSCSEG00000011599	ssb	89	48.732	ENSMNEG00000034698	-	88	51.713	Macaca_nemestrina
ENSCSEG00000011599	ssb	99	48.267	ENSMNEG00000028321	SSB	98	48.267	Macaca_nemestrina
ENSCSEG00000011599	ssb	99	57.250	ENSMLEG00000035717	SSB	98	56.750	Mandrillus_leucophaeus
ENSCSEG00000011599	ssb	99	39.850	ENSMLEG00000042644	-	97	39.401	Mandrillus_leucophaeus
ENSCSEG00000011599	ssb	99	84.925	ENSMAMG00000004800	ssb	99	84.925	Mastacembelus_armatus
ENSCSEG00000011599	ssb	99	76.942	ENSMZEG00005005749	ssb	99	76.190	Maylandia_zebra
ENSCSEG00000011599	ssb	99	57.107	ENSMGAG00000010328	SSB	97	62.500	Meleagris_gallopavo
ENSCSEG00000011599	ssb	99	58.000	ENSMICG00000028252	-	98	57.250	Microcebus_murinus
ENSCSEG00000011599	ssb	97	52.185	ENSMICG00000033304	-	93	53.514	Microcebus_murinus
ENSCSEG00000011599	ssb	99	47.739	ENSMODG00000019271	-	97	47.739	Monodelphis_domestica
ENSCSEG00000011599	ssb	87	53.988	ENSMODG00000007027	-	97	45.363	Monodelphis_domestica
ENSCSEG00000011599	ssb	99	55.693	ENSMODG00000008227	-	98	55.693	Monodelphis_domestica
ENSCSEG00000011599	ssb	91	77.260	ENSMALG00000008045	ssb	89	80.163	Monopterus_albus
ENSCSEG00000011599	ssb	99	52.555	MGP_CAROLIEiJ_G0023629	-	94	62.914	Mus_caroli
ENSCSEG00000011599	ssb	99	52.555	ENSMUSG00000068882	Ssb	94	62.914	Mus_musculus
ENSCSEG00000011599	ssb	99	52.311	MGP_PahariEiJ_G0025081	-	94	62.252	Mus_pahari
ENSCSEG00000011599	ssb	99	52.555	MGP_SPRETEiJ_G0024551	Ssb	94	62.914	Mus_spretus
ENSCSEG00000011599	ssb	99	57.750	ENSMPUG00000000785	SSB	98	57.000	Mustela_putorius_furo
ENSCSEG00000011599	ssb	99	57.317	ENSMLUG00000016316	SSB	98	56.934	Myotis_lucifugus
ENSCSEG00000011599	ssb	99	76.441	ENSNBRG00000012661	ssb	99	75.689	Neolamprologus_brichardi
ENSCSEG00000011599	ssb	99	57.000	ENSNLEG00000004958	SSB	98	56.500	Nomascus_leucogenys
ENSCSEG00000011599	ssb	90	44.290	ENSNLEG00000028754	-	75	47.664	Nomascus_leucogenys
ENSCSEG00000011599	ssb	62	61.600	ENSMEUG00000001650	-	100	61.600	Notamacropus_eugenii
ENSCSEG00000011599	ssb	94	56.533	ENSODEG00000004202	-	99	56.000	Octodon_degus
ENSCSEG00000011599	ssb	99	76.382	ENSONIG00000008776	ssb	99	75.628	Oreochromis_niloticus
ENSCSEG00000011599	ssb	98	57.360	ENSOANG00000008543	SSB	96	57.360	Ornithorhynchus_anatinus
ENSCSEG00000011599	ssb	99	57.143	ENSOCUG00000010396	SSB	98	56.642	Oryctolagus_cuniculus
ENSCSEG00000011599	ssb	99	80.151	ENSORLG00000017208	ssb	99	80.151	Oryzias_latipes
ENSCSEG00000011599	ssb	99	79.950	ENSORLG00020022574	ssb	99	79.950	Oryzias_latipes_hni
ENSCSEG00000011599	ssb	99	80.653	ENSORLG00015016592	ssb	99	80.653	Oryzias_latipes_hsok
ENSCSEG00000011599	ssb	100	81.000	ENSOMEG00000003193	ssb	100	81.000	Oryzias_melastigma
ENSCSEG00000011599	ssb	99	54.217	ENSOGAG00000029768	SSB	98	54.217	Otolemur_garnettii
ENSCSEG00000011599	ssb	99	58.000	ENSOARG00000002906	SSB	98	57.250	Ovis_aries
ENSCSEG00000011599	ssb	98	45.570	ENSPPAG00000006189	-	95	45.576	Pan_paniscus
ENSCSEG00000011599	ssb	99	56.576	ENSPPAG00000042673	SSB	98	56.079	Pan_paniscus
ENSCSEG00000011599	ssb	99	48.250	ENSPPAG00000032427	-	95	56.911	Pan_paniscus
ENSCSEG00000011599	ssb	99	58.105	ENSPPRG00000006599	SSB	98	57.357	Panthera_pardus
ENSCSEG00000011599	ssb	99	58.105	ENSPTIG00000011021	SSB	95	57.357	Panthera_tigris_altaica
ENSCSEG00000011599	ssb	99	46.250	ENSPTRG00000042880	-	97	46.250	Pan_troglodytes
ENSCSEG00000011599	ssb	99	56.576	ENSPTRG00000012620	SSB	98	56.079	Pan_troglodytes
ENSCSEG00000011599	ssb	99	42.569	ENSPANG00000034126	-	97	42.317	Papio_anubis
ENSCSEG00000011599	ssb	99	57.250	ENSPANG00000007440	SSB	98	56.750	Papio_anubis
ENSCSEG00000011599	ssb	96	38.542	ENSPANG00000031877	-	90	38.021	Papio_anubis
ENSCSEG00000011599	ssb	100	68.828	ENSPKIG00000019325	ssb	99	68.828	Paramormyrops_kingsleyae
ENSCSEG00000011599	ssb	99	56.328	ENSPSIG00000002265	SSB	91	57.320	Pelodiscus_sinensis
ENSCSEG00000011599	ssb	81	76.471	ENSPMGG00000020075	ssb	87	76.900	Periophthalmus_magnuspinnatus
ENSCSEG00000011599	ssb	82	43.976	ENSPMAG00000002982	ssb	89	43.864	Petromyzon_marinus
ENSCSEG00000011599	ssb	98	56.489	ENSPCIG00000028591	-	98	57.143	Phascolarctos_cinereus
ENSCSEG00000011599	ssb	99	81.980	ENSPFOG00000009650	ssb	99	81.980	Poecilia_formosa
ENSCSEG00000011599	ssb	99	81.980	ENSPLAG00000020498	ssb	99	81.980	Poecilia_latipinna
ENSCSEG00000011599	ssb	99	81.726	ENSPMEG00000001051	ssb	99	81.726	Poecilia_mexicana
ENSCSEG00000011599	ssb	91	82.967	ENSPREG00000003708	ssb	95	82.967	Poecilia_reticulata
ENSCSEG00000011599	ssb	99	57.000	ENSPPYG00000012919	SSB	98	56.500	Pongo_abelii
ENSCSEG00000011599	ssb	95	56.250	ENSPCAG00000010276	SSB	99	55.729	Procavia_capensis
ENSCSEG00000011599	ssb	99	56.000	ENSPCOG00000015741	-	98	55.500	Propithecus_coquereli
ENSCSEG00000011599	ssb	99	51.750	ENSPCOG00000023189	-	98	51.000	Propithecus_coquereli
ENSCSEG00000011599	ssb	89	58.939	ENSPVAG00000006615	SSB	100	58.939	Pteropus_vampyrus
ENSCSEG00000011599	ssb	99	76.441	ENSPNYG00000006444	ssb	99	75.689	Pundamilia_nyererei
ENSCSEG00000011599	ssb	100	60.880	ENSPNAG00000011708	ssb	100	61.125	Pygocentrus_nattereri
ENSCSEG00000011599	ssb	99	52.068	ENSRNOG00000007998	Ssb	98	51.825	Rattus_norvegicus
ENSCSEG00000011599	ssb	99	52.764	ENSRNOG00000011606	AABR07061825.1	98	52.513	Rattus_norvegicus
ENSCSEG00000011599	ssb	99	42.145	ENSRBIG00000029918	-	97	41.646	Rhinopithecus_bieti
ENSCSEG00000011599	ssb	99	49.752	ENSRBIG00000041972	SSB	83	66.055	Rhinopithecus_bieti
ENSCSEG00000011599	ssb	94	48.549	ENSRBIG00000041232	-	98	48.021	Rhinopithecus_bieti
ENSCSEG00000011599	ssb	89	52.342	ENSRBIG00000041608	-	97	49.862	Rhinopithecus_bieti
ENSCSEG00000011599	ssb	98	48.990	ENSRROG00000031684	-	99	48.485	Rhinopithecus_roxellana
ENSCSEG00000011599	ssb	99	57.250	ENSRROG00000040346	SSB	98	56.750	Rhinopithecus_roxellana
ENSCSEG00000011599	ssb	98	51.122	ENSRROG00000034102	-	97	50.877	Rhinopithecus_roxellana
ENSCSEG00000011599	ssb	99	46.633	ENSRROG00000007149	-	98	46.135	Rhinopithecus_roxellana
ENSCSEG00000011599	ssb	99	57.250	ENSSBOG00000027204	SSB	98	56.750	Saimiri_boliviensis_boliviensis
ENSCSEG00000011599	ssb	99	56.892	ENSSHAG00000018062	SSB	98	57.393	Sarcophilus_harrisii
ENSCSEG00000011599	ssb	100	67.160	ENSSFOG00015000550	ssb	99	67.160	Scleropages_formosus
ENSCSEG00000011599	ssb	100	78.446	ENSSMAG00000013885	ssb	99	84.324	Scophthalmus_maximus
ENSCSEG00000011599	ssb	99	86.683	ENSSDUG00000020117	ssb	99	86.683	Seriola_dumerili
ENSCSEG00000011599	ssb	99	81.658	ENSSLDG00000002525	ssb	99	81.910	Seriola_lalandi_dorsalis
ENSCSEG00000011599	ssb	95	53.385	ENSSARG00000007747	SSB	99	52.865	Sorex_araneus
ENSCSEG00000011599	ssb	99	56.608	ENSSPUG00000012112	SSB	98	57.357	Sphenodon_punctatus
ENSCSEG00000011599	ssb	100	83.459	ENSSPAG00000005696	ssb	100	83.459	Stegastes_partitus
ENSCSEG00000011599	ssb	96	52.821	ENSSSCG00000015938	SSB	96	52.564	Sus_scrofa
ENSCSEG00000011599	ssb	94	56.283	ENSTGUG00000007942	SSB	97	55.224	Taeniopygia_guttata
ENSCSEG00000011599	ssb	99	80.000	ENSTRUG00000017839	ssb	99	79.648	Takifugu_rubripes
ENSCSEG00000011599	ssb	91	78.747	ENSTNIG00000000915	ssb	90	84.783	Tetraodon_nigroviridis
ENSCSEG00000011599	ssb	81	66.055	ENSTBEG00000009056	SSB	80	66.055	Tupaia_belangeri
ENSCSEG00000011599	ssb	99	58.354	ENSTTRG00000002152	SSB	98	57.606	Tursiops_truncatus
ENSCSEG00000011599	ssb	92	59.128	ENSUAMG00000027833	SSB	96	58.311	Ursus_americanus
ENSCSEG00000011599	ssb	99	57.107	ENSUMAG00000013907	SSB	98	56.359	Ursus_maritimus
ENSCSEG00000011599	ssb	99	57.935	ENSVPAG00000007183	SSB	98	57.179	Vicugna_pacos
ENSCSEG00000011599	ssb	99	57.107	ENSVVUG00000016573	SSB	76	56.359	Vulpes_vulpes
ENSCSEG00000011599	ssb	97	51.923	ENSXETG00000025402	ssb	97	51.683	Xenopus_tropicalis
ENSCSEG00000011599	ssb	91	78.846	ENSXCOG00000019109	ssb	95	78.846	Xiphophorus_couchianus
ENSCSEG00000011599	ssb	99	80.605	ENSXMAG00000004888	ssb	99	80.605	Xiphophorus_maculatus