EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011651 (Gene tree)
Gene ID: 103379361
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1686 bases
Position: chr5:17828537-17830222
Accession: 103379361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018156	ResIII	PF04851.15	9.9e-06	1	1
ENSCSEP00000018156	DEAD	PF00270.29	1.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018381	-	1686	XM_008310887	ENSCSEP00000018156	561 (aa)	XP_008309109	UPI0004981374

Gene Model

Click here to download ENSCSEG00000011651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011651	ddx28	68	30.971	ENSCSEG00000016139	ddx49	75	30.971
ENSCSEG00000011651	ddx28	65	30.688	ENSCSEG00000012161	ddx55	61	30.688
ENSCSEG00000011651	ddx28	55	32.374	ENSCSEG00000015970	ddx51	51	32.374
ENSCSEG00000011651	ddx28	69	30.000	ENSCSEG00000013051	DDX41	62	30.000
ENSCSEG00000011651	ddx28	72	32.039	ENSCSEG00000007687	ddx47	86	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011651	ddx28	91	46.768	ENSG00000182810	DDX28	95	47.318	Homo_sapiens
ENSCSEG00000011651	ddx28	99	71.277	ENSAPOG00000000991	ddx28	97	71.277	Acanthochromis_polyacanthus
ENSCSEG00000011651	ddx28	90	47.573	ENSAMEG00000019426	DDX28	95	47.961	Ailuropoda_melanoleuca
ENSCSEG00000011651	ddx28	100	67.606	ENSACIG00000021615	ddx28	99	67.606	Amphilophus_citrinellus
ENSCSEG00000011651	ddx28	99	70.922	ENSAOCG00000004610	ddx28	97	70.922	Amphiprion_ocellaris
ENSCSEG00000011651	ddx28	99	71.099	ENSAPEG00000002143	ddx28	97	71.099	Amphiprion_percula
ENSCSEG00000011651	ddx28	100	70.123	ENSATEG00000018691	ddx28	99	70.123	Anabas_testudineus
ENSCSEG00000011651	ddx28	90	46.602	ENSACAG00000009755	DDX28	94	46.602	Anolis_carolinensis
ENSCSEG00000011651	ddx28	99	66.075	ENSACLG00000012984	ddx28	99	66.075	Astatotilapia_calliptera
ENSCSEG00000011651	ddx28	95	61.091	ENSAMXG00000005878	ddx28	95	61.091	Astyanax_mexicanus
ENSCSEG00000011651	ddx28	90	48.654	ENSBTAG00000004290	DDX28	94	48.654	Bos_taurus
ENSCSEG00000011651	ddx28	93	46.011	ENSCAFG00000020327	DDX28	98	46.355	Canis_familiaris
ENSCSEG00000011651	ddx28	93	46.011	ENSCAFG00020019785	DDX28	98	46.355	Canis_lupus_dingo
ENSCSEG00000011651	ddx28	90	48.654	ENSCHIG00000009658	DDX28	94	48.654	Capra_hircus
ENSCSEG00000011651	ddx28	90	49.320	ENSCPOG00000013746	DDX28	94	49.320	Cavia_porcellus
ENSCSEG00000011651	ddx28	95	47.532	ENSCSAG00000018472	DDX28	98	47.532	Chlorocebus_sabaeus
ENSCSEG00000011651	ddx28	85	48.760	ENSCPBG00000012105	DDX28	85	48.760	Chrysemys_picta_bellii
ENSCSEG00000011651	ddx28	63	37.912	ENSCSAVG00000006341	-	94	37.912	Ciona_savignyi
ENSCSEG00000011651	ddx28	87	48.703	ENSCGRG00001024412	Ddx28	94	49.203	Cricetulus_griseus_chok1gshd
ENSCSEG00000011651	ddx28	99	67.679	ENSCVAG00000004044	ddx28	99	67.679	Cyprinodon_variegatus
ENSCSEG00000011651	ddx28	99	59.253	ENSDARG00000060411	ddx28	98	59.253	Danio_rerio
ENSCSEG00000011651	ddx28	63	56.438	ENSDNOG00000033593	DDX28	99	56.712	Dasypus_novemcinctus
ENSCSEG00000011651	ddx28	90	46.743	ENSDORG00000028868	Ddx28	95	46.743	Dipodomys_ordii
ENSCSEG00000011651	ddx28	79	35.556	FBgn0086130	Dbp21E2	82	35.556	Drosophila_melanogaster
ENSCSEG00000011651	ddx28	95	47.619	ENSETEG00000001062	-	99	47.619	Echinops_telfairi
ENSCSEG00000011651	ddx28	91	32.571	ENSEBUG00000004791	ddx28	94	32.967	Eptatretus_burgeri
ENSCSEG00000011651	ddx28	90	47.674	ENSEASG00005020387	DDX28	94	47.868	Equus_asinus_asinus
ENSCSEG00000011651	ddx28	90	48.256	ENSECAG00000006451	DDX28	94	48.450	Equus_caballus
ENSCSEG00000011651	ddx28	70	44.691	ENSEEUG00000005017	DDX28	93	44.691	Erinaceus_europaeus
ENSCSEG00000011651	ddx28	90	64.717	ENSELUG00000005302	ddx28	99	64.231	Esox_lucius
ENSCSEG00000011651	ddx28	96	47.080	ENSFCAG00000012858	DDX28	99	47.080	Felis_catus
ENSCSEG00000011651	ddx28	99	65.954	ENSFHEG00000012573	ddx28	99	65.954	Fundulus_heteroclitus
ENSCSEG00000011651	ddx28	92	65.524	ENSGMOG00000017045	ddx28	99	65.524	Gadus_morhua
ENSCSEG00000011651	ddx28	89	43.654	ENSGALG00000048700	DDX28	90	43.715	Gallus_gallus
ENSCSEG00000011651	ddx28	99	66.547	ENSGAFG00000009249	ddx28	99	66.547	Gambusia_affinis
ENSCSEG00000011651	ddx28	90	69.981	ENSGACG00000016367	ddx28	95	69.981	Gasterosteus_aculeatus
ENSCSEG00000011651	ddx28	79	47.228	ENSGAGG00000004565	DDX28	98	47.228	Gopherus_agassizii
ENSCSEG00000011651	ddx28	90	47.036	ENSGGOG00000001220	DDX28	95	47.592	Gorilla_gorilla
ENSCSEG00000011651	ddx28	100	68.310	ENSHBUG00000001016	ddx28	99	68.310	Haplochromis_burtoni
ENSCSEG00000011651	ddx28	91	68.906	ENSHCOG00000017590	ddx28	94	68.906	Hippocampus_comes
ENSCSEG00000011651	ddx28	100	57.491	ENSIPUG00000017350	Ddx28	99	57.491	Ictalurus_punctatus
ENSCSEG00000011651	ddx28	91	48.851	ENSSTOG00000002064	DDX28	95	48.851	Ictidomys_tridecemlineatus
ENSCSEG00000011651	ddx28	90	48.369	ENSJJAG00000012460	-	95	48.369	Jaculus_jaculus
ENSCSEG00000011651	ddx28	99	65.371	ENSKMAG00000018183	ddx28	99	65.371	Kryptolebias_marmoratus
ENSCSEG00000011651	ddx28	100	67.535	ENSLBEG00000006072	ddx28	100	67.478	Labrus_bergylta
ENSCSEG00000011651	ddx28	89	56.078	ENSLACG00000005578	DDX28	88	56.078	Latimeria_chalumnae
ENSCSEG00000011651	ddx28	93	57.765	ENSLOCG00000017604	ddx28	95	57.765	Lepisosteus_oculatus
ENSCSEG00000011651	ddx28	90	48.837	ENSLAFG00000031239	DDX28	94	48.837	Loxodonta_africana
ENSCSEG00000011651	ddx28	95	47.532	ENSMMUG00000010836	DDX28	98	47.532	Macaca_mulatta
ENSCSEG00000011651	ddx28	99	68.607	ENSMAMG00000020220	ddx28	99	68.607	Mastacembelus_armatus
ENSCSEG00000011651	ddx28	100	68.838	ENSMZEG00005009292	ddx28	99	68.838	Maylandia_zebra
ENSCSEG00000011651	ddx28	90	39.020	ENSMICG00000012346	-	93	39.020	Microcebus_murinus
ENSCSEG00000011651	ddx28	90	49.133	ENSMOCG00000009815	Ddx28	95	49.133	Microtus_ochrogaster
ENSCSEG00000011651	ddx28	99	67.318	ENSMMOG00000000270	ddx28	99	67.318	Mola_mola
ENSCSEG00000011651	ddx28	90	49.222	ENSMODG00000005303	DDX28	93	49.222	Monodelphis_domestica
ENSCSEG00000011651	ddx28	99	69.805	ENSMALG00000008864	ddx28	99	69.805	Monopterus_albus
ENSCSEG00000011651	ddx28	90	47.885	MGP_CAROLIEiJ_G0031510	Ddx28	94	47.885	Mus_caroli
ENSCSEG00000011651	ddx28	90	48.269	ENSMUSG00000045538	Ddx28	94	48.269	Mus_musculus
ENSCSEG00000011651	ddx28	90	48.077	MGP_PahariEiJ_G0023110	Ddx28	94	48.077	Mus_pahari
ENSCSEG00000011651	ddx28	90	47.876	MGP_SPRETEiJ_G0032628	Ddx28	94	47.876	Mus_spretus
ENSCSEG00000011651	ddx28	63	52.603	ENSMPUG00000006915	DDX28	91	53.151	Mustela_putorius_furo
ENSCSEG00000011651	ddx28	91	46.578	ENSMLUG00000005899	DDX28	96	46.578	Myotis_lucifugus
ENSCSEG00000011651	ddx28	90	48.752	ENSNGAG00000015762	Ddx28	95	48.752	Nannospalax_galili
ENSCSEG00000011651	ddx28	99	69.039	ENSNBRG00000001337	ddx28	100	69.039	Neolamprologus_brichardi
ENSCSEG00000011651	ddx28	99	68.206	ENSONIG00000020597	ddx28	99	68.206	Oreochromis_niloticus
ENSCSEG00000011651	ddx28	89	49.515	ENSOCUG00000023074	DDX28	94	49.515	Oryctolagus_cuniculus
ENSCSEG00000011651	ddx28	92	68.571	ENSORLG00000011968	ddx28	94	68.571	Oryzias_latipes
ENSCSEG00000011651	ddx28	92	68.571	ENSORLG00020001951	ddx28	95	68.571	Oryzias_latipes_hni
ENSCSEG00000011651	ddx28	92	68.190	ENSORLG00015023030	ddx28	95	68.190	Oryzias_latipes_hsok
ENSCSEG00000011651	ddx28	99	66.608	ENSOMEG00000012445	ddx28	99	66.608	Oryzias_melastigma
ENSCSEG00000011651	ddx28	90	49.419	ENSOGAG00000016895	DDX28	94	49.419	Otolemur_garnettii
ENSCSEG00000011651	ddx28	78	47.884	ENSOARG00000003313	DDX28	99	47.884	Ovis_aries
ENSCSEG00000011651	ddx28	91	45.019	ENSPPAG00000036971	DDX28	95	45.019	Pan_paniscus
ENSCSEG00000011651	ddx28	96	47.263	ENSPPRG00000018322	DDX28	99	47.263	Panthera_pardus
ENSCSEG00000011651	ddx28	96	45.620	ENSPTIG00000006444	DDX28	99	45.620	Panthera_tigris_altaica
ENSCSEG00000011651	ddx28	91	47.318	ENSPTRG00000008258	DDX28	95	47.318	Pan_troglodytes
ENSCSEG00000011651	ddx28	92	62.667	ENSPKIG00000021200	ddx28	96	62.667	Paramormyrops_kingsleyae
ENSCSEG00000011651	ddx28	52	54.266	ENSPSIG00000001127	DDX28	97	54.266	Pelodiscus_sinensis
ENSCSEG00000011651	ddx28	92	64.583	ENSPMGG00000007908	ddx28	93	64.583	Periophthalmus_magnuspinnatus
ENSCSEG00000011651	ddx28	92	48.030	ENSPEMG00000003395	Ddx28	97	48.030	Peromyscus_maniculatus_bairdii
ENSCSEG00000011651	ddx28	50	45.804	ENSPMAG00000006983	DDX28	95	45.804	Petromyzon_marinus
ENSCSEG00000011651	ddx28	99	67.199	ENSPFOG00000020952	ddx28	98	67.199	Poecilia_formosa
ENSCSEG00000011651	ddx28	99	67.199	ENSPFOG00000020838	DDX28	99	67.199	Poecilia_formosa
ENSCSEG00000011651	ddx28	99	67.376	ENSPLAG00000016292	ddx28	98	67.376	Poecilia_latipinna
ENSCSEG00000011651	ddx28	99	67.199	ENSPMEG00000011311	ddx28	97	67.199	Poecilia_mexicana
ENSCSEG00000011651	ddx28	99	66.844	ENSPREG00000002899	ddx28	98	66.844	Poecilia_reticulata
ENSCSEG00000011651	ddx28	91	46.970	ENSPPYG00000007481	DDX28	96	47.519	Pongo_abelii
ENSCSEG00000011651	ddx28	90	48.837	ENSPCOG00000024632	DDX28	94	48.837	Propithecus_coquereli
ENSCSEG00000011651	ddx28	100	68.486	ENSPNYG00000018804	ddx28	99	68.486	Pundamilia_nyererei
ENSCSEG00000011651	ddx28	92	61.582	ENSPNAG00000014597	ddx28	98	61.582	Pygocentrus_nattereri
ENSCSEG00000011651	ddx28	90	47.490	ENSRNOG00000019817	Ddx28	94	47.490	Rattus_norvegicus
ENSCSEG00000011651	ddx28	89	61.448	ENSSFOG00015010181	ddx28	95	60.302	Scleropages_formosus
ENSCSEG00000011651	ddx28	92	72.710	ENSSMAG00000006831	ddx28	98	72.710	Scophthalmus_maximus
ENSCSEG00000011651	ddx28	99	71.631	ENSSDUG00000003257	ddx28	98	71.631	Seriola_dumerili
ENSCSEG00000011651	ddx28	99	71.454	ENSSLDG00000004513	ddx28	98	71.454	Seriola_lalandi_dorsalis
ENSCSEG00000011651	ddx28	91	47.308	ENSSARG00000014169	DDX28	95	47.500	Sorex_araneus
ENSCSEG00000011651	ddx28	99	69.681	ENSSPAG00000000988	ddx28	99	69.681	Stegastes_partitus
ENSCSEG00000011651	ddx28	91	48.084	ENSSSCG00000026038	DDX28	95	48.282	Sus_scrofa
ENSCSEG00000011651	ddx28	99	65.603	ENSTRUG00000007815	ddx28	99	65.603	Takifugu_rubripes
ENSCSEG00000011651	ddx28	89	68.775	ENSTNIG00000011352	ddx28	99	68.775	Tetraodon_nigroviridis
ENSCSEG00000011651	ddx28	72	62.911	ENSTBEG00000017695	DDX28	75	62.911	Tupaia_belangeri
ENSCSEG00000011651	ddx28	90	48.256	ENSUAMG00000016116	DDX28	94	48.643	Ursus_americanus
ENSCSEG00000011651	ddx28	77	49.774	ENSUMAG00000019200	DDX28	89	50.226	Ursus_maritimus
ENSCSEG00000011651	ddx28	77	40.980	ENSVVUG00000012876	DDX28	85	41.348	Vulpes_vulpes
ENSCSEG00000011651	ddx28	88	45.382	ENSXETG00000005435	ddx28	97	45.382	Xenopus_tropicalis
ENSCSEG00000011651	ddx28	90	71.850	ENSXCOG00000012364	ddx28	90	71.850	Xiphophorus_couchianus
ENSCSEG00000011651	ddx28	90	70.784	ENSXMAG00000019603	ddx28	93	70.784	Xiphophorus_maculatus