EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000011789 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6410 bases
Position: chr18:4503222-4509631
Accession: 103394113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018471	BUD22	PF09073.10	2.7e-15	1	1
ENSCSEP00000018398	BUD22	PF09073.10	2.1e-14	1	1
ENSCSEP00000018380	BUD22	PF09073.10	6.8e-14	1	1
ENSCSEP00000018416	BUD22	PF09073.10	7e-14	1	1
ENSCSEP00000018444	BUD22	PF09073.10	9.6e-14	1	1
ENSCSEP00000018498	BUD22	PF09073.10	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018702	-	1194	-	ENSCSEP00000018471	397 (aa)	-	-
ENSCSET00000018644	-	1155	XM_008331254	ENSCSEP00000018416	384 (aa)	XP_016896773	-
ENSCSET00000018676	-	1101	-	ENSCSEP00000018444	366 (aa)	-	-
ENSCSET00000018729	-	1083	-	ENSCSEP00000018498	360 (aa)	-	-
ENSCSET00000018625	-	1179	-	ENSCSEP00000018398	392 (aa)	-	-
ENSCSET00000018606	-	1074	-	ENSCSEP00000018380	357 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000011789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011789	-	99	41.163	ENSG00000151304	SRFBP1	100	40.319	Homo_sapiens
ENSCSEG00000011789	-	90	78.000	ENSAPOG00000021469	-	71	83.721	Acanthochromis_polyacanthus
ENSCSEG00000011789	-	99	37.619	ENSAMEG00000018050	SRFBP1	98	40.000	Ailuropoda_melanoleuca
ENSCSEG00000011789	-	100	56.308	ENSACIG00000019127	-	100	55.711	Amphilophus_citrinellus
ENSCSEG00000011789	-	90	78.000	ENSAOCG00000002182	-	70	87.805	Amphiprion_ocellaris
ENSCSEG00000011789	-	93	78.000	ENSAPEG00000003041	-	72	83.721	Amphiprion_percula
ENSCSEG00000011789	-	85	80.000	ENSATEG00000007289	-	59	86.047	Anabas_testudineus
ENSCSEG00000011789	-	85	54.483	ENSACAG00000003779	SRFBP1	68	61.475	Anolis_carolinensis
ENSCSEG00000011789	-	99	40.553	ENSANAG00000022485	SRFBP1	74	72.973	Aotus_nancymaae
ENSCSEG00000011789	-	89	68.493	ENSACLG00000013909	-	71	86.047	Astatotilapia_calliptera
ENSCSEG00000011789	-	97	54.464	ENSAMXG00000040976	srfbp1	58	78.947	Astyanax_mexicanus
ENSCSEG00000011789	-	78	61.983	ENSBTAG00000014320	SRFBP1	79	61.983	Bos_taurus
ENSCSEG00000011789	-	79	62.602	ENSCJAG00000017177	SRFBP1	99	39.953	Callithrix_jacchus
ENSCSEG00000011789	-	79	63.200	ENSCAFG00000000512	SRFBP1	70	63.200	Canis_familiaris
ENSCSEG00000011789	-	79	63.200	ENSCAFG00020009389	SRFBP1	70	63.200	Canis_lupus_dingo
ENSCSEG00000011789	-	97	38.837	ENSTSYG00000008630	-	78	61.207	Carlito_syrichta
ENSCSEG00000011789	-	97	31.235	ENSTSYG00000006869	-	99	30.476	Carlito_syrichta
ENSCSEG00000011789	-	99	40.553	ENSCPOG00000004695	SRFBP1	100	38.987	Cavia_porcellus
ENSCSEG00000011789	-	79	63.415	ENSCCAG00000032237	-	73	72.973	Cebus_capucinus
ENSCSEG00000011789	-	79	63.200	ENSCATG00000040904	SRFBP1	79	63.200	Cercocebus_atys
ENSCSEG00000011789	-	99	38.642	ENSCLAG00000003630	SRFBP1	100	39.401	Chinchilla_lanigera
ENSCSEG00000011789	-	81	62.400	ENSCSAG00000014636	SRFBP1	72	80.645	Chlorocebus_sabaeus
ENSCSEG00000011789	-	79	63.200	ENSCANG00000041298	SRFBP1	79	63.200	Colobus_angolensis_palliatus
ENSCSEG00000011789	-	99	41.986	ENSCGRG00001000718	Srfbp1	100	40.487	Cricetulus_griseus_chok1gshd
ENSCSEG00000011789	-	99	39.336	ENSCGRG00000010837	Srfbp1	100	39.578	Cricetulus_griseus_crigri
ENSCSEG00000011789	-	99	50.518	ENSCVAG00000013010	-	99	51.515	Cyprinodon_variegatus
ENSCSEG00000011789	-	99	47.926	ENSDARG00000075323	srfbp1	60	64.516	Danio_rerio
ENSCSEG00000011789	-	77	35.376	ENSDNOG00000017733	SRFBP1	52	41.243	Dasypus_novemcinctus
ENSCSEG00000011789	-	79	35.404	ENSETEG00000012408	SRFBP1	100	36.364	Echinops_telfairi
ENSCSEG00000011789	-	81	45.600	ENSEBUG00000007806	SRFBP1	57	46.281	Eptatretus_burgeri
ENSCSEG00000011789	-	99	42.563	ENSEASG00005012421	SRFBP1	99	42.045	Equus_asinus_asinus
ENSCSEG00000011789	-	99	42.105	ENSECAG00000015330	SRFBP1	99	40.961	Equus_caballus
ENSCSEG00000011789	-	99	38.018	ENSEEUG00000011514	SRFBP1	71	76.667	Erinaceus_europaeus
ENSCSEG00000011789	-	79	72.131	ENSELUG00000018381	-	63	72.131	Esox_lucius
ENSCSEG00000011789	-	79	64.000	ENSFCAG00000035118	SRFBP1	99	41.745	Felis_catus
ENSCSEG00000011789	-	76	81.250	ENSFALG00000007595	SRFBP1	100	36.321	Ficedula_albicollis
ENSCSEG00000011789	-	98	40.326	ENSFDAG00000005102	SRFBP1	78	60.331	Fukomys_damarensis
ENSCSEG00000011789	-	96	76.429	ENSFHEG00000000477	-	68	80.328	Fundulus_heteroclitus
ENSCSEG00000011789	-	98	47.000	ENSGMOG00000012729	-	85	45.802	Gadus_morhua
ENSCSEG00000011789	-	84	81.250	ENSGALG00000005316	SRFBP1	71	81.250	Gallus_gallus
ENSCSEG00000011789	-	93	67.742	ENSGAFG00000018777	-	72	82.927	Gambusia_affinis
ENSCSEG00000011789	-	99	56.459	ENSGACG00000009055	-	83	55.422	Gasterosteus_aculeatus
ENSCSEG00000011789	-	83	61.538	ENSGAGG00000024915	SRFBP1	72	81.818	Gopherus_agassizii
ENSCSEG00000011789	-	99	41.259	ENSGGOG00000007725	SRFBP1	99	39.720	Gorilla_gorilla
ENSCSEG00000011789	-	83	77.273	ENSHCOG00000020644	-	57	79.339	Hippocampus_comes
ENSCSEG00000011789	-	85	69.106	ENSIPUG00000014640	srfbp1	64	69.106	Ictalurus_punctatus
ENSCSEG00000011789	-	99	40.275	ENSSTOG00000029184	SRFBP1	97	41.570	Ictidomys_tridecemlineatus
ENSCSEG00000011789	-	99	39.713	ENSJJAG00000013229	Srfbp1	100	40.000	Jaculus_jaculus
ENSCSEG00000011789	-	99	53.636	ENSLBEG00000013924	-	74	89.744	Labrus_bergylta
ENSCSEG00000011789	-	59	58.974	ENSLACG00000004456	SRFBP1	64	59.459	Latimeria_chalumnae
ENSCSEG00000011789	-	99	44.639	ENSLOCG00000008772	SRFBP1	71	80.556	Lepisosteus_oculatus
ENSCSEG00000011789	-	99	41.839	ENSLAFG00000015303	SRFBP1	78	64.000	Loxodonta_africana
ENSCSEG00000011789	-	79	63.200	ENSMFAG00000031263	SRFBP1	79	63.200	Macaca_fascicularis
ENSCSEG00000011789	-	79	63.200	ENSMMUG00000021009	SRFBP1	79	63.200	Macaca_mulatta
ENSCSEG00000011789	-	79	62.400	ENSMNEG00000040870	SRFBP1	79	62.400	Macaca_nemestrina
ENSCSEG00000011789	-	97	78.000	ENSMAMG00000004632	-	70	85.714	Mastacembelus_armatus
ENSCSEG00000011789	-	89	67.606	ENSMZEG00005000432	-	72	86.047	Maylandia_zebra
ENSCSEG00000011789	-	76	60.000	ENSMAUG00000009431	Srfbp1	68	80.000	Mesocricetus_auratus
ENSCSEG00000011789	-	99	40.225	ENSMICG00000042923	SRFBP1	99	39.180	Microcebus_murinus
ENSCSEG00000011789	-	99	36.967	ENSMOCG00000006206	Srfbp1	70	75.000	Microtus_ochrogaster
ENSCSEG00000011789	-	94	92.683	ENSMMOG00000021202	-	81	88.372	Mola_mola
ENSCSEG00000011789	-	99	40.888	ENSMODG00000013487	-	99	41.822	Monodelphis_domestica
ENSCSEG00000011789	-	99	66.839	ENSMALG00000001812	-	75	97.059	Monopterus_albus
ENSCSEG00000011789	-	79	61.600	MGP_CAROLIEiJ_G0022271	Srfbp1	71	77.143	Mus_caroli
ENSCSEG00000011789	-	79	61.111	ENSMUSG00000024528	Srfbp1	71	71.053	Mus_musculus
ENSCSEG00000011789	-	99	41.364	MGP_PahariEiJ_G0019004	Srfbp1	73	71.795	Mus_pahari
ENSCSEG00000011789	-	79	62.400	MGP_SPRETEiJ_G0023184	Srfbp1	100	40.044	Mus_spretus
ENSCSEG00000011789	-	99	38.942	ENSMPUG00000013031	SRFBP1	100	41.289	Mustela_putorius_furo
ENSCSEG00000011789	-	88	60.870	ENSMLUG00000009984	SRFBP1	78	58.824	Myotis_lucifugus
ENSCSEG00000011789	-	99	39.770	ENSNGAG00000013229	Srfbp1	99	39.443	Nannospalax_galili
ENSCSEG00000011789	-	99	56.064	ENSNBRG00000001146	-	99	55.684	Neolamprologus_brichardi
ENSCSEG00000011789	-	99	41.121	ENSNLEG00000011949	SRFBP1	78	62.400	Nomascus_leucogenys
ENSCSEG00000011789	-	63	46.667	ENSOPRG00000003881	-	68	46.667	Ochotona_princeps
ENSCSEG00000011789	-	99	39.713	ENSODEG00000007258	SRFBP1	71	70.000	Octodon_degus
ENSCSEG00000011789	-	87	35.904	ENSOANG00000010042	-	99	36.436	Ornithorhynchus_anatinus
ENSCSEG00000011789	-	75	65.789	ENSOCUG00000009556	SRFBP1	71	80.000	Oryctolagus_cuniculus
ENSCSEG00000011789	-	99	60.109	ENSORLG00000014234	-	61	81.395	Oryzias_latipes
ENSCSEG00000011789	-	96	62.209	ENSORLG00020020129	-	59	76.033	Oryzias_latipes_hni
ENSCSEG00000011789	-	98	53.723	ENSORLG00015000238	-	98	51.459	Oryzias_latipes_hsok
ENSCSEG00000011789	-	82	61.345	ENSOGAG00000032423	SRFBP1	98	36.259	Otolemur_garnettii
ENSCSEG00000011789	-	99	41.452	ENSPPAG00000035848	SRFBP1	99	40.047	Pan_paniscus
ENSCSEG00000011789	-	79	64.000	ENSPPRG00000001695	SRFBP1	100	41.026	Panthera_pardus
ENSCSEG00000011789	-	79	64.000	ENSPTIG00000012305	SRFBP1	99	41.412	Panthera_tigris_altaica
ENSCSEG00000011789	-	99	41.379	ENSPTRG00000017172	SRFBP1	79	63.200	Pan_troglodytes
ENSCSEG00000011789	-	81	63.200	ENSPANG00000003799	SRFBP1	79	63.200	Papio_anubis
ENSCSEG00000011789	-	99	72.000	ENSPKIG00000024291	-	79	84.211	Paramormyrops_kingsleyae
ENSCSEG00000011789	-	98	58.784	ENSPSIG00000010650	SRFBP1	71	78.788	Pelodiscus_sinensis
ENSCSEG00000011789	-	100	52.225	ENSPMGG00000001675	-	99	52.758	Periophthalmus_magnuspinnatus
ENSCSEG00000011789	-	99	50.538	ENSPCIG00000028532	SRFBP1	95	42.117	Phascolarctos_cinereus
ENSCSEG00000011789	-	99	52.370	ENSPFOG00000005272	-	87	51.282	Poecilia_formosa
ENSCSEG00000011789	-	90	73.913	ENSPLAG00000018282	-	73	82.927	Poecilia_latipinna
ENSCSEG00000011789	-	90	73.913	ENSPMEG00000020184	-	73	82.927	Poecilia_mexicana
ENSCSEG00000011789	-	98	55.742	ENSPREG00000017248	-	98	52.868	Poecilia_reticulata
ENSCSEG00000011789	-	99	41.628	ENSPPYG00000015714	SRFBP1	99	39.720	Pongo_abelii
ENSCSEG00000011789	-	79	62.602	ENSPCOG00000027331	SRFBP1	99	40.559	Propithecus_coquereli
ENSCSEG00000011789	-	64	58.824	ENSPVAG00000017512	-	51	61.600	Pteropus_vampyrus
ENSCSEG00000011789	-	99	70.149	ENSPNYG00000010355	-	71	86.047	Pundamilia_nyererei
ENSCSEG00000011789	-	85	57.639	ENSPNAG00000029666	srfbp1	69	57.931	Pygocentrus_nattereri
ENSCSEG00000011789	-	99	40.535	ENSRNOG00000014808	Srfbp1	69	80.000	Rattus_norvegicus
ENSCSEG00000011789	-	99	38.588	ENSRBIG00000031064	SRFBP1	99	36.195	Rhinopithecus_bieti
ENSCSEG00000011789	-	79	63.200	ENSRROG00000026932	SRFBP1	79	63.200	Rhinopithecus_roxellana
ENSCSEG00000011789	-	83	63.415	ENSSBOG00000015464	-	99	39.211	Saimiri_boliviensis_boliviensis
ENSCSEG00000011789	-	79	60.800	ENSSHAG00000016003	SRFBP1	100	40.878	Sarcophilus_harrisii
ENSCSEG00000011789	-	83	71.545	ENSSFOG00015001274	srfbp1	72	82.927	Scleropages_formosus
ENSCSEG00000011789	-	95	92.857	ENSSMAG00000020630	-	69	90.698	Scophthalmus_maximus
ENSCSEG00000011789	-	83	92.857	ENSSDUG00000001828	-	76	90.698	Seriola_dumerili
ENSCSEG00000011789	-	99	40.233	ENSSARG00000010669	SRFBP1	99	38.876	Sorex_araneus
ENSCSEG00000011789	-	97	42.317	ENSSPUG00000009204	SRFBP1	99	41.218	Sphenodon_punctatus
ENSCSEG00000011789	-	80	78.000	ENSSPAG00000010728	-	75	87.805	Stegastes_partitus
ENSCSEG00000011789	-	99	41.818	ENSSSCG00000022656	SRFBP1	80	62.698	Sus_scrofa
ENSCSEG00000011789	-	99	51.074	ENSTNIG00000009267	-	98	52.983	Tetraodon_nigroviridis
ENSCSEG00000011789	-	59	60.870	ENSTTRG00000007726	SRFBP1	51	60.870	Tursiops_truncatus
ENSCSEG00000011789	-	88	60.714	ENSUAMG00000016707	SRFBP1	100	39.762	Ursus_americanus
ENSCSEG00000011789	-	78	60.504	ENSUMAG00000018340	SRFBP1	72	80.000	Ursus_maritimus
ENSCSEG00000011789	-	79	60.800	ENSVPAG00000005714	SRFBP1	80	60.800	Vicugna_pacos
ENSCSEG00000011789	-	81	63.200	ENSVVUG00000019178	SRFBP1	70	63.200	Vulpes_vulpes
ENSCSEG00000011789	-	85	59.055	ENSXETG00000004681	srfbp1	73	78.125	Xenopus_tropicalis
ENSCSEG00000011789	-	93	63.077	ENSXCOG00000003410	-	83	85.366	Xiphophorus_couchianus
ENSCSEG00000011789	-	93	63.077	ENSXMAG00000026251	-	72	85.366	Xiphophorus_maculatus