EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011816 (Gene tree)
Gene ID: 103377033
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10564 bases
Position: chr3:5825896-5836459
Accession: 103377033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018418	MMR_HSR1	PF01926.23	8e-08	1	1
ENSCSEP00000018426	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018647	-	2776	XM_008307649	ENSCSEP00000018418	204 (aa)	XP_008305871	UPI00049707BE
ENSCSET00000018654	-	543	-	ENSCSEP00000018426	180 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000011816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011816	rab18a	79	51.235	ENSCSEG00000014416	zgc:171927	76	51.235
ENSCSEG00000011816	rab18a	95	46.939	ENSCSEG00000020977	-	95	46.939
ENSCSEG00000011816	rab18a	91	35.829	ENSCSEG00000010565	rab23	88	35.829
ENSCSEG00000011816	rab18a	72	41.216	ENSCSEG00000006243	zgc:101559	63	41.216
ENSCSEG00000011816	rab18a	80	42.073	ENSCSEG00000000205	RAB15	79	42.073
ENSCSEG00000011816	rab18a	83	40.116	ENSCSEG00000017861	-	81	40.116
ENSCSEG00000011816	rab18a	80	37.725	ENSCSEG00000005357	-	81	37.725
ENSCSEG00000011816	rab18a	81	34.302	ENSCSEG00000011820	rras	91	34.783
ENSCSEG00000011816	rab18a	79	45.062	ENSCSEG00000007383	rab11a	75	45.062
ENSCSEG00000011816	rab18a	80	36.310	ENSCSEG00000010116	rab9a	79	36.310
ENSCSEG00000011816	rab18a	79	48.780	ENSCSEG00000016933	rab12	67	48.780
ENSCSEG00000011816	rab18a	71	42.857	ENSCSEG00000016284	rab33a	53	42.857
ENSCSEG00000011816	rab18a	83	37.791	ENSCSEG00000019722	RAB39B	81	37.791
ENSCSEG00000011816	rab18a	84	34.104	ENSCSEG00000018987	si:ch73-116o1.2	83	34.104
ENSCSEG00000011816	rab18a	88	47.826	ENSCSEG00000017211	rab2a	97	44.498
ENSCSEG00000011816	rab18a	79	43.827	ENSCSEG00000017026	rab25a	76	43.827
ENSCSEG00000011816	rab18a	95	40.796	ENSCSEG00000017024	rab5c	91	40.796
ENSCSEG00000011816	rab18a	89	43.590	ENSCSEG00000016498	rab14	90	43.590
ENSCSEG00000011816	rab18a	88	44.865	ENSCSEG00000002358	rab13	90	44.865
ENSCSEG00000011816	rab18a	80	39.394	ENSCSEG00000010582	rab42a	76	39.394
ENSCSEG00000011816	rab18a	79	50.000	ENSCSEG00000018732	rab1ba	81	50.000
ENSCSEG00000011816	rab18a	83	39.766	ENSCSEG00000016556	rab6bb	80	39.766
ENSCSEG00000011816	rab18a	95	33.654	ENSCSEG00000020348	rab33ba	88	33.654
ENSCSEG00000011816	rab18a	83	39.181	ENSCSEG00000003122	rab6ba	80	39.181
ENSCSEG00000011816	rab18a	75	35.443	ENSCSEG00000012961	rab34a	61	35.443
ENSCSEG00000011816	rab18a	81	32.530	ENSCSEG00000007927	hrasb	87	32.530
ENSCSEG00000011816	rab18a	79	37.349	ENSCSEG00000014467	rab9b	75	37.349
ENSCSEG00000011816	rab18a	52	36.111	ENSCSEG00000015746	-	81	34.746
ENSCSEG00000011816	rab18a	79	43.827	ENSCSEG00000011982	rab25b	74	43.827
ENSCSEG00000011816	rab18a	73	36.000	ENSCSEG00000009987	rras2	79	36.025
ENSCSEG00000011816	rab18a	50	59.804	ENSCSEG00000009988	si:dkey-16l2.16	78	59.804
ENSCSEG00000011816	rab18a	94	41.538	ENSCSEG00000010402	-	89	41.538
ENSCSEG00000011816	rab18a	80	37.725	ENSCSEG00000002970	RAB7A	75	37.725
ENSCSEG00000011816	rab18a	90	30.645	ENSCSEG00000005737	kras	87	32.927
ENSCSEG00000011816	rab18a	84	33.908	ENSCSEG00000005479	rabl2	76	33.908
ENSCSEG00000011816	rab18a	79	31.707	ENSCSEG00000015770	si:cabz01085950.1	81	31.707
ENSCSEG00000011816	rab18a	79	31.928	ENSCSEG00000014284	dnajc27	61	31.928
ENSCSEG00000011816	rab18a	83	50.000	ENSCSEG00000007292	rab30	83	50.000
ENSCSEG00000011816	rab18a	84	48.256	ENSCSEG00000013400	rab35b	99	43.564
ENSCSEG00000011816	rab18a	77	32.727	ENSCSEG00000016611	rheb	85	32.727
ENSCSEG00000011816	rab18a	65	30.597	ENSCSEG00000003442	arl5a	66	30.597
ENSCSEG00000011816	rab18a	79	43.558	ENSCSEG00000003768	rab15	69	43.558
ENSCSEG00000011816	rab18a	82	44.379	ENSCSEG00000007121	rab11ba	65	44.379
ENSCSEG00000011816	rab18a	92	41.361	ENSCSEG00000012149	rab11bb	84	41.361
ENSCSEG00000011816	rab18a	83	38.728	ENSCSEG00000004941	rab41	79	38.728
ENSCSEG00000011816	rab18a	81	31.765	ENSCSEG00000003537	rhebl1	90	31.765
ENSCSEG00000011816	rab18a	72	41.830	ENSCSEG00000014479	-	63	41.830
ENSCSEG00000011816	rab18a	90	38.503	ENSCSEG00000019797	rab22a	96	38.503
ENSCSEG00000011816	rab18a	80	42.515	ENSCSEG00000019183	si:dkey-34d22.5	75	42.515
ENSCSEG00000011816	rab18a	95	40.196	ENSCSEG00000011996	rab11al	93	40.196
ENSCSEG00000011816	rab18a	92	42.553	ENSCSEG00000007239	-	84	42.553
ENSCSEG00000011816	rab18a	96	82.051	ENSCSEG00000016803	rab18b	99	82.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011816	rab18a	100	97.059	ENSAPOG00000010760	rab18a	100	97.059	Acanthochromis_polyacanthus
ENSCSEG00000011816	rab18a	100	95.556	ENSACIG00000009617	rab18a	100	95.556	Amphilophus_citrinellus
ENSCSEG00000011816	rab18a	100	96.569	ENSAOCG00000016233	rab18a	100	96.569	Amphiprion_ocellaris
ENSCSEG00000011816	rab18a	100	96.569	ENSAPEG00000005392	rab18a	100	96.569	Amphiprion_percula
ENSCSEG00000011816	rab18a	100	97.549	ENSATEG00000021911	rab18a	100	97.549	Anabas_testudineus
ENSCSEG00000011816	rab18a	100	89.268	ENSACAG00000005463	-	100	89.268	Anolis_carolinensis
ENSCSEG00000011816	rab18a	100	95.098	ENSACLG00000011484	rab18a	100	95.098	Astatotilapia_calliptera
ENSCSEG00000011816	rab18a	100	87.864	ENSCPBG00000015839	-	100	87.864	Chrysemys_picta_bellii
ENSCSEG00000011816	rab18a	96	71.144	ENSCPBG00000027619	-	98	71.144	Chrysemys_picta_bellii
ENSCSEG00000011816	rab18a	97	74.874	ENSCING00000006838	-	99	74.874	Ciona_intestinalis
ENSCSEG00000011816	rab18a	97	74.372	ENSCSAVG00000010348	-	99	74.372	Ciona_savignyi
ENSCSEG00000011816	rab18a	94	94.792	ENSCVAG00000015451	rab18a	100	94.118	Cyprinodon_variegatus
ENSCSEG00000011816	rab18a	100	82.439	ENSDARG00000055291	rab18a	100	82.439	Danio_rerio
ENSCSEG00000011816	rab18a	100	93.171	ENSELUG00000003805	rab18a	100	93.171	Esox_lucius
ENSCSEG00000011816	rab18a	94	95.833	ENSFHEG00000019455	rab18a	100	95.098	Fundulus_heteroclitus
ENSCSEG00000011816	rab18a	94	95.288	ENSGAFG00000002790	rab18a	100	93.627	Gambusia_affinis
ENSCSEG00000011816	rab18a	100	87.864	ENSGAGG00000015642	-	100	87.864	Gopherus_agassizii
ENSCSEG00000011816	rab18a	100	95.098	ENSHBUG00000001518	rab18a	100	95.098	Haplochromis_burtoni
ENSCSEG00000011816	rab18a	99	96.059	ENSLBEG00000005861	rab18a	95	96.059	Labrus_bergylta
ENSCSEG00000011816	rab18a	93	91.053	ENSLACG00000009310	rab18a	100	88.350	Latimeria_chalumnae
ENSCSEG00000011816	rab18a	100	89.756	ENSLOCG00000007491	rab18a	100	89.756	Lepisosteus_oculatus
ENSCSEG00000011816	rab18a	100	96.569	ENSMAMG00000014320	rab18a	100	96.569	Mastacembelus_armatus
ENSCSEG00000011816	rab18a	100	94.608	ENSMZEG00005017235	rab18a	100	94.608	Maylandia_zebra
ENSCSEG00000011816	rab18a	100	98.039	ENSMALG00000009813	rab18a	100	98.039	Monopterus_albus
ENSCSEG00000011816	rab18a	100	95.098	ENSNBRG00000013507	rab18a	100	95.098	Neolamprologus_brichardi
ENSCSEG00000011816	rab18a	94	94.271	ENSORLG00000004624	rab18a	100	94.118	Oryzias_latipes
ENSCSEG00000011816	rab18a	94	94.792	ENSORLG00020008333	rab18a	100	94.608	Oryzias_latipes_hni
ENSCSEG00000011816	rab18a	94	94.271	ENSORLG00015004739	rab18a	100	94.118	Oryzias_latipes_hsok
ENSCSEG00000011816	rab18a	100	93.627	ENSOMEG00000020605	rab18a	100	93.627	Oryzias_melastigma
ENSCSEG00000011816	rab18a	100	87.805	ENSPKIG00000009825	rab18a	100	87.805	Paramormyrops_kingsleyae
ENSCSEG00000011816	rab18a	100	92.157	ENSPMGG00000020409	-	100	92.157	Periophthalmus_magnuspinnatus
ENSCSEG00000011816	rab18a	94	95.288	ENSPFOG00000007571	rab18a	100	93.627	Poecilia_formosa
ENSCSEG00000011816	rab18a	94	95.288	ENSPLAG00000010104	rab18a	100	93.627	Poecilia_latipinna
ENSCSEG00000011816	rab18a	94	95.288	ENSPMEG00000013085	rab18a	100	93.627	Poecilia_mexicana
ENSCSEG00000011816	rab18a	94	95.288	ENSPREG00000005923	rab18a	83	93.627	Poecilia_reticulata
ENSCSEG00000011816	rab18a	100	95.098	ENSPNYG00000007064	rab18a	100	95.098	Pundamilia_nyererei
ENSCSEG00000011816	rab18a	99	82.090	ENSPNAG00000011548	rab18a	100	82.090	Pygocentrus_nattereri
ENSCSEG00000011816	rab18a	100	91.220	ENSSFOG00015017444	rab18a	84	91.220	Scleropages_formosus
ENSCSEG00000011816	rab18a	94	94.819	ENSSMAG00000002969	rab18a	100	94.634	Scophthalmus_maximus
ENSCSEG00000011816	rab18a	100	98.039	ENSSDUG00000003823	rab18a	100	98.039	Seriola_dumerili
ENSCSEG00000011816	rab18a	100	98.039	ENSSLDG00000006977	rab18a	100	98.039	Seriola_lalandi_dorsalis
ENSCSEG00000011816	rab18a	93	91.005	ENSSPUG00000017677	-	100	87.864	Sphenodon_punctatus
ENSCSEG00000011816	rab18a	100	93.627	ENSTRUG00000004984	rab18a	100	93.627	Takifugu_rubripes
ENSCSEG00000011816	rab18a	100	87.864	ENSUMAG00000015574	-	100	87.864	Ursus_maritimus
ENSCSEG00000011816	rab18a	100	89.320	ENSXETG00000004556	rab18	100	89.806	Xenopus_tropicalis
ENSCSEG00000011816	rab18a	94	95.812	ENSXMAG00000024122	rab18a	100	94.118	Xiphophorus_maculatus