EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011817 (Gene tree)
Gene ID: 103392863
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 667
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5341 bases
Position: chr17:6064313-6069653
Accession: 103392863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018411	zf-C2H2	PF00096.26	1.5e-14	1	3
ENSCSEP00000018411	zf-C2H2	PF00096.26	1.5e-14	2	3
ENSCSEP00000018411	zf-C2H2	PF00096.26	1.5e-14	3	3
ENSCSEP00000018413	zf-C2H2	PF00096.26	4.7e-14	1	3
ENSCSEP00000018413	zf-C2H2	PF00096.26	4.7e-14	2	3
ENSCSEP00000018413	zf-C2H2	PF00096.26	4.7e-14	3	3
ENSCSEP00000018411	zf-met	PF12874.7	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018639	-	4182	-	ENSCSEP00000018411	367 (aa)	-	-
ENSCSET00000018641	-	4449	XM_017040476	ENSCSEP00000018413	456 (aa)	XP_016895965	UPI0007DC8CAD

Gene Model

Click here to download ENSCSEG00000011817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011817	-	90	33.333	ENSCSEG00000020730	-	99	36.296
ENSCSEG00000011817	-	55	35.211	ENSCSEG00000018535	-	84	37.647
ENSCSEG00000011817	-	52	35.669	ENSCSEG00000005974	-	78	37.500
ENSCSEG00000011817	-	53	52.564	ENSCSEG00000013398	-	85	51.515
ENSCSEG00000011817	-	50	43.571	ENSCSEG00000020696	-	99	43.571
ENSCSEG00000011817	-	54	37.324	ENSCSEG00000019047	-	76	50.000
ENSCSEG00000011817	-	50	56.897	ENSCSEG00000005983	-	92	56.897
ENSCSEG00000011817	-	52	36.301	ENSCSEG00000019979	prdm5	54	36.301
ENSCSEG00000011817	-	56	40.000	ENSCSEG00000004210	-	96	49.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011817	-	96	59.020	ENSATEG00000023773	-	96	59.020	Anabas_testudineus
ENSCSEG00000011817	-	66	36.620	ENSDARG00000103244	CABZ01081752.3	83	36.620	Danio_rerio
ENSCSEG00000011817	-	60	39.286	ENSDARG00000089715	si:cabz01054394.7	80	39.286	Danio_rerio
ENSCSEG00000011817	-	60	40.816	ENSDARG00000091393	si:ch211-161m3.6	67	40.816	Danio_rerio
ENSCSEG00000011817	-	50	53.846	ENSDARG00000110229	zgc:173702	82	53.846	Danio_rerio
ENSCSEG00000011817	-	60	38.621	ENSDARG00000102008	si:dkey-72l17.6	77	38.621	Danio_rerio
ENSCSEG00000011817	-	59	55.844	ENSDARG00000087453	si:ch73-57f22.2	66	55.844	Danio_rerio
ENSCSEG00000011817	-	56	37.313	ENSDARG00000091994	znf1048	79	38.686	Danio_rerio
ENSCSEG00000011817	-	55	39.568	ENSDARG00000098087	si:dkey-30f3.2	92	39.568	Danio_rerio
ENSCSEG00000011817	-	60	38.732	ENSDARG00000098986	znf1040	79	38.732	Danio_rerio
ENSCSEG00000011817	-	59	34.286	ENSDARG00000114793	CU182823.4	75	42.574	Danio_rerio
ENSCSEG00000011817	-	55	39.568	ENSDARG00000102791	zgc:174704	92	39.568	Danio_rerio
ENSCSEG00000011817	-	60	38.806	ENSDARG00000104407	BX649453.1	79	41.727	Danio_rerio
ENSCSEG00000011817	-	59	41.429	ENSDARG00000112725	si:dkey-22h13.2	69	41.429	Danio_rerio
ENSCSEG00000011817	-	59	36.184	ENSDARG00000075417	zgc:175107	85	36.184	Danio_rerio
ENSCSEG00000011817	-	59	37.313	ENSDARG00000092938	znf1047	79	37.313	Danio_rerio
ENSCSEG00000011817	-	65	34.146	ENSDARG00000111550	CABZ01002702.1	64	39.098	Danio_rerio
ENSCSEG00000011817	-	59	37.313	ENSDARG00000102600	CABZ01003344.1	79	38.686	Danio_rerio
ENSCSEG00000011817	-	95	50.113	ENSFHEG00000015400	-	94	51.351	Fundulus_heteroclitus
ENSCSEG00000011817	-	96	50.670	ENSGAFG00000013839	-	99	52.009	Gambusia_affinis
ENSCSEG00000011817	-	56	49.351	ENSKMAG00000011441	-	65	49.351	Kryptolebias_marmoratus
ENSCSEG00000011817	-	96	57.111	ENSMAMG00000020468	-	98	57.788	Mastacembelus_armatus
ENSCSEG00000011817	-	70	72.000	ENSNBRG00000019881	-	98	72.000	Neolamprologus_brichardi
ENSCSEG00000011817	-	72	46.816	ENSORLG00015013828	-	86	46.442	Oryzias_latipes_hsok
ENSCSEG00000011817	-	96	45.254	ENSOMEG00000005928	-	98	45.475	Oryzias_melastigma
ENSCSEG00000011817	-	75	34.109	ENSPFOG00000022423	-	75	34.109	Poecilia_formosa
ENSCSEG00000011817	-	73	53.901	ENSPFOG00000005998	-	89	54.610	Poecilia_formosa
ENSCSEG00000011817	-	96	51.209	ENSPLAG00000001674	-	97	51.209	Poecilia_latipinna
ENSCSEG00000011817	-	96	50.331	ENSPMEG00000013200	-	97	51.762	Poecilia_mexicana
ENSCSEG00000011817	-	97	56.570	ENSSMAG00000002598	-	99	56.570	Scophthalmus_maximus
ENSCSEG00000011817	-	99	56.458	ENSSDUG00000015456	-	99	56.667	Seriola_dumerili
ENSCSEG00000011817	-	96	58.166	ENSSPAG00000017203	-	96	58.166	Stegastes_partitus
ENSCSEG00000011817	-	96	51.096	ENSXMAG00000021195	-	97	51.096	Xiphophorus_maculatus