EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000011978 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4896 bases
Position: chr17:13813990-13818885
Accession: 103393493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018706	RRM_1	PF00076.22	4.3e-20	1	1
ENSCSEP00000018706	U1snRNP70_N	PF12220.8	8.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018940	-	681	XM_008330485	ENSCSEP00000018706	226 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000011978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011978	snrnp70	99	91.480	ENSG00000104852	SNRNP70	99	88.415	Homo_sapiens
ENSCSEG00000011978	snrnp70	63	91.549	ENSAPOG00000009322	snrnp70	89	91.549	Acanthochromis_polyacanthus
ENSCSEG00000011978	snrnp70	99	87.500	ENSAMEG00000014468	SNRNP70	51	87.054	Ailuropoda_melanoleuca
ENSCSEG00000011978	snrnp70	99	96.875	ENSAOCG00000011672	snrnp70	50	86.547	Amphiprion_ocellaris
ENSCSEG00000011978	snrnp70	96	91.244	ENSACAG00000013276	SNRNP70	51	90.991	Anolis_carolinensis
ENSCSEG00000011978	snrnp70	99	91.480	ENSANAG00000036787	SNRNP70	99	88.415	Aotus_nancymaae
ENSCSEG00000011978	snrnp70	73	88.415	ENSBTAG00000048800	-	99	88.415	Bos_taurus
ENSCSEG00000011978	snrnp70	89	52.475	WBGene00004390	rnp-7	57	51.053	Caenorhabditis_elegans
ENSCSEG00000011978	snrnp70	99	91.480	ENSCJAG00000000193	SNRNP70	99	88.415	Callithrix_jacchus
ENSCSEG00000011978	snrnp70	99	91.480	ENSCAFG00000003711	SNRNP70	99	88.415	Canis_familiaris
ENSCSEG00000011978	snrnp70	99	88.444	ENSCAFG00020025470	SNRNP70	99	84.337	Canis_lupus_dingo
ENSCSEG00000011978	snrnp70	73	88.415	ENSCHIG00000018534	-	99	88.415	Capra_hircus
ENSCSEG00000011978	snrnp70	99	91.480	ENSCPOG00000019589	SNRNP70	51	91.480	Cavia_porcellus
ENSCSEG00000011978	snrnp70	99	91.480	ENSCATG00000016149	SNRNP70	51	91.480	Cercocebus_atys
ENSCSEG00000011978	snrnp70	99	91.480	ENSCLAG00000007991	SNRNP70	51	91.480	Chinchilla_lanigera
ENSCSEG00000011978	snrnp70	96	91.667	ENSCSAG00000002759	SNRNP70	52	91.441	Chlorocebus_sabaeus
ENSCSEG00000011978	snrnp70	96	91.705	ENSCPBG00000014841	SNRNP70	51	91.441	Chrysemys_picta_bellii
ENSCSEG00000011978	snrnp70	98	65.022	ENSCSAVG00000010109	-	57	64.159	Ciona_savignyi
ENSCSEG00000011978	snrnp70	99	91.480	ENSCANG00000036607	SNRNP70	90	91.480	Colobus_angolensis_palliatus
ENSCSEG00000011978	snrnp70	99	91.480	ENSCGRG00001020676	Snrnp70	50	91.480	Cricetulus_griseus_chok1gshd
ENSCSEG00000011978	snrnp70	99	91.480	ENSCGRG00000018048	Snrnp70	50	91.480	Cricetulus_griseus_crigri
ENSCSEG00000011978	snrnp70	70	96.226	ENSCVAG00000003912	snrnp70	99	96.226	Cyprinodon_variegatus
ENSCSEG00000011978	snrnp70	99	95.089	ENSDARG00000077126	snrnp70	99	95.031	Danio_rerio
ENSCSEG00000011978	snrnp70	73	88.415	ENSDNOG00000035849	-	99	88.415	Dasypus_novemcinctus
ENSCSEG00000011978	snrnp70	99	91.480	ENSDORG00000010228	Snrnp70	50	91.480	Dipodomys_ordii
ENSCSEG00000011978	snrnp70	99	91.480	ENSEASG00005004917	SNRNP70	51	91.480	Equus_asinus_asinus
ENSCSEG00000011978	snrnp70	73	88.415	ENSECAG00000013936	-	99	88.415	Equus_caballus
ENSCSEG00000011978	snrnp70	99	69.507	ENSEEUG00000005666	SNRNP70	51	69.507	Erinaceus_europaeus
ENSCSEG00000011978	snrnp70	99	91.480	ENSFCAG00000042603	SNRNP70	53	91.480	Felis_catus
ENSCSEG00000011978	snrnp70	99	91.480	ENSFDAG00000013830	SNRNP70	95	88.889	Fukomys_damarensis
ENSCSEG00000011978	snrnp70	99	94.667	ENSGMOG00000011492	snrnp70	99	94.667	Gadus_morhua
ENSCSEG00000011978	snrnp70	100	95.575	ENSGACG00000000448	snrnp70	71	95.575	Gasterosteus_aculeatus
ENSCSEG00000011978	snrnp70	70	73.333	ENSGAGG00000012628	SNRNP70	99	70.769	Gopherus_agassizii
ENSCSEG00000011978	snrnp70	99	91.480	ENSGGOG00000008245	SNRNP70	99	88.415	Gorilla_gorilla
ENSCSEG00000011978	snrnp70	73	88.415	ENSHGLG00100001651	-	99	88.415	Heterocephalus_glaber_male
ENSCSEG00000011978	snrnp70	73	88.415	ENSSTOG00000013988	-	99	88.415	Ictidomys_tridecemlineatus
ENSCSEG00000011978	snrnp70	99	91.480	ENSJJAG00000002614	Snrnp70	50	91.480	Jaculus_jaculus
ENSCSEG00000011978	snrnp70	99	91.480	ENSLAFG00000028536	SNRNP70	97	91.480	Loxodonta_africana
ENSCSEG00000011978	snrnp70	99	91.480	ENSMFAG00000039824	SNRNP70	51	91.480	Macaca_fascicularis
ENSCSEG00000011978	snrnp70	96	91.667	ENSMMUG00000004928	SNRNP70	99	88.415	Macaca_mulatta
ENSCSEG00000011978	snrnp70	99	91.480	ENSMNEG00000038057	SNRNP70	52	91.480	Macaca_nemestrina
ENSCSEG00000011978	snrnp70	99	91.480	ENSMLEG00000030967	SNRNP70	51	91.480	Mandrillus_leucophaeus
ENSCSEG00000011978	snrnp70	99	91.480	ENSMAUG00000020970	Snrnp70	50	91.480	Mesocricetus_auratus
ENSCSEG00000011978	snrnp70	99	91.480	ENSMICG00000038437	SNRNP70	99	88.415	Microcebus_murinus
ENSCSEG00000011978	snrnp70	99	91.480	ENSMOCG00000012825	Snrnp70	50	91.480	Microtus_ochrogaster
ENSCSEG00000011978	snrnp70	99	91.480	MGP_CAROLIEiJ_G0029714	Snrnp70	100	90.826	Mus_caroli
ENSCSEG00000011978	snrnp70	99	91.480	ENSMUSG00000063511	Snrnp70	100	90.826	Mus_musculus
ENSCSEG00000011978	snrnp70	99	91.480	MGP_PahariEiJ_G0012939	Snrnp70	100	90.826	Mus_pahari
ENSCSEG00000011978	snrnp70	99	91.480	MGP_SPRETEiJ_G0030812	Snrnp70	100	90.826	Mus_spretus
ENSCSEG00000011978	snrnp70	99	91.480	ENSMPUG00000003258	SNRNP70	51	91.480	Mustela_putorius_furo
ENSCSEG00000011978	snrnp70	99	91.480	ENSMLUG00000011766	SNRNP70	51	91.480	Myotis_lucifugus
ENSCSEG00000011978	snrnp70	99	91.480	ENSNGAG00000021191	Snrnp70	95	88.889	Nannospalax_galili
ENSCSEG00000011978	snrnp70	99	96.429	ENSNBRG00000003126	snrnp70	96	96.429	Neolamprologus_brichardi
ENSCSEG00000011978	snrnp70	96	91.244	ENSNLEG00000004899	SNRNP70	87	91.244	Nomascus_leucogenys
ENSCSEG00000011978	snrnp70	99	96.875	ENSONIG00000007822	snrnp70	52	96.875	Oreochromis_niloticus
ENSCSEG00000011978	snrnp70	100	90.265	ENSOANG00000005213	SNRNP70	99	90.265	Ornithorhynchus_anatinus
ENSCSEG00000011978	snrnp70	99	91.071	ENSOGAG00000029310	SNRNP70	51	89.286	Otolemur_garnettii
ENSCSEG00000011978	snrnp70	98	91.441	ENSOARG00000012608	SNRNP70	60	91.441	Ovis_aries
ENSCSEG00000011978	snrnp70	99	91.480	ENSPPAG00000035067	SNRNP70	99	88.415	Pan_paniscus
ENSCSEG00000011978	snrnp70	99	91.480	ENSPPRG00000005579	SNRNP70	51	91.480	Panthera_pardus
ENSCSEG00000011978	snrnp70	99	91.480	ENSPTRG00000011277	SNRNP70	99	88.415	Pan_troglodytes
ENSCSEG00000011978	snrnp70	99	91.480	ENSPANG00000004068	SNRNP70	51	91.480	Papio_anubis
ENSCSEG00000011978	snrnp70	72	83.951	ENSPKIG00000019992	snrnp70	86	83.951	Paramormyrops_kingsleyae
ENSCSEG00000011978	snrnp70	98	80.180	ENSPSIG00000015251	SNRNP70	88	80.180	Pelodiscus_sinensis
ENSCSEG00000011978	snrnp70	71	96.273	ENSPMGG00000010153	snrnp70	77	96.273	Periophthalmus_magnuspinnatus
ENSCSEG00000011978	snrnp70	99	91.480	ENSPEMG00000019011	Snrnp70	50	91.480	Peromyscus_maniculatus_bairdii
ENSCSEG00000011978	snrnp70	85	80.829	ENSPMAG00000008502	snrnp70	98	80.423	Petromyzon_marinus
ENSCSEG00000011978	snrnp70	96	91.705	ENSPCIG00000007296	SNRNP70	52	91.441	Phascolarctos_cinereus
ENSCSEG00000011978	snrnp70	99	91.031	ENSPPYG00000010234	SNRNP70	51	91.031	Pongo_abelii
ENSCSEG00000011978	snrnp70	99	82.960	ENSPCOG00000023103	SNRNP70	79	82.960	Propithecus_coquereli
ENSCSEG00000011978	snrnp70	99	85.202	ENSPVAG00000009578	SNRNP70	51	85.202	Pteropus_vampyrus
ENSCSEG00000011978	snrnp70	99	91.480	ENSRBIG00000042387	SNRNP70	83	91.480	Rhinopithecus_bieti
ENSCSEG00000011978	snrnp70	99	91.480	ENSRROG00000033636	SNRNP70	83	91.480	Rhinopithecus_roxellana
ENSCSEG00000011978	snrnp70	99	91.480	ENSSBOG00000020026	SNRNP70	99	88.415	Saimiri_boliviensis_boliviensis
ENSCSEG00000011978	snrnp70	96	91.705	ENSSHAG00000002194	SNRNP70	52	91.441	Sarcophilus_harrisii
ENSCSEG00000011978	snrnp70	96	92.166	ENSSPUG00000016621	SNRNP70	52	91.892	Sphenodon_punctatus
ENSCSEG00000011978	snrnp70	73	88.415	ENSSSCG00000023792	-	99	88.415	Sus_scrofa
ENSCSEG00000011978	snrnp70	99	91.480	ENSTTRG00000017099	SNRNP70	51	91.480	Tursiops_truncatus
ENSCSEG00000011978	snrnp70	99	91.480	ENSUAMG00000016147	SNRNP70	51	91.480	Ursus_americanus
ENSCSEG00000011978	snrnp70	99	91.480	ENSUMAG00000001467	SNRNP70	99	88.415	Ursus_maritimus
ENSCSEG00000011978	snrnp70	98	78.733	ENSVPAG00000005959	-	100	78.733	Vicugna_pacos
ENSCSEG00000011978	snrnp70	99	91.480	ENSVVUG00000022976	SNRNP70	99	88.415	Vulpes_vulpes
ENSCSEG00000011978	snrnp70	100	88.496	ENSXETG00000022919	snrnp70	57	88.496	Xenopus_tropicalis